RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 FBXO31Q5XUX0 539 aaPredicted RBP28.27■■■□□ 2.12
PRKCSH-211ENST00000590098 WASHC2CQ9Y4E1 1318 aa28.26■■■□□ 2.11
PRKCSH-211ENST00000590098 KDM5DQ9BY66 1539 aa28.25■■■□□ 2.11
PRKCSH-211ENST00000590098 FAM135AQ9P2D6 1515 aa28.25■■■□□ 2.11
PRKCSH-211ENST00000590098 MYOM3Q5VTT5 1437 aa28.24■■■□□ 2.11
PRKCSH-211ENST00000590098 MIA2Q96PC5 1412 aa28.24■■■□□ 2.11
PRKCSH-211ENST00000590098 PLA2R1Q13018 1463 aa28.23■■■□□ 2.11
PRKCSH-211ENST00000590098 APLP2Q06481 763 aa28.23■■■□□ 2.11
PRKCSH-211ENST00000590098 PKD2Q13563 968 aa28.23■■■□□ 2.11
PRKCSH-211ENST00000590098 MAST1Q9Y2H9 1570 aa28.21■■■□□ 2.11
PRKCSH-211ENST00000590098 A2ML1A8K2U0 1454 aa28.2■■■□□ 2.1
PRKCSH-211ENST00000590098 ZNF335Q9H4Z2 1342 aaPredicted RBP28.19■■■□□ 2.1
PRKCSH-211ENST00000590098 TNRQ92752 1358 aa28.19■■■□□ 2.1
PRKCSH-211ENST00000590098 PZPP20742 1482 aa28.19■■■□□ 2.1
PRKCSH-211ENST00000590098 TCOF1Q13428 1488 aaKnown RBP28.16■■■□□ 2.1
PRKCSH-211ENST00000590098 DNMT1P26358 1616 aaKnown RBP28.16■■■□□ 2.1
PRKCSH-211ENST00000590098 RNF17Q9BXT8 1623 aaKnown RBP28.12■■■□□ 2.09
PRKCSH-211ENST00000590098 IQSEC2Q5JU85 1478 aa28.12■■■□□ 2.09
PRKCSH-211ENST00000590098 EIF2AK4Q9P2K8 1649 aaKnown RBP28.11■■■□□ 2.09
PRKCSH-211ENST00000590098 ZC3H13Q5T200 1668 aaKnown RBP28.08■■■□□ 2.09
PRKCSH-211ENST00000590098 DUOX2Q9NRD8 1548 aa28.07■■■□□ 2.08
PRKCSH-211ENST00000590098 PTPN23Q9H3S7 1636 aa28.07■■■□□ 2.08
PRKCSH-211ENST00000590098 NLRP1Q9C000 1473 aa28.06■■■□□ 2.08
PRKCSH-211ENST00000590098 ABCC3O15438 1527 aa28.06■■■□□ 2.08
PRKCSH-211ENST00000590098 POLR1AO95602 1720 aaPredicted RBP28.06■■■□□ 2.08
PRKCSH-211ENST00000590098 THEMISQ8N1K5 641 aaPredicted RBP28.05■■■□□ 2.08
PRKCSH-211ENST00000590098 CROCC2H7BZ55 1655 aa28.03■■■□□ 2.08
PRKCSH-211ENST00000590098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.02■■■□□ 2.08
PRKCSH-211ENST00000590098 SHANK2Q9UPX8 1470 aa28.02■■■□□ 2.08
PRKCSH-211ENST00000590098 ABCC5O15440 1437 aa28.01■■■□□ 2.08
PRKCSH-211ENST00000590098 ANKLE2Q86XL3 938 aa28.01■■■□□ 2.07
PRKCSH-211ENST00000590098 UGGT1Q9NYU2 1555 aa28.01■■■□□ 2.07
PRKCSH-211ENST00000590098 KIF15Q9NS87 1388 aa28■■■□□ 2.07
PRKCSH-211ENST00000590098 MROH1Q8NDA8 1641 aa28■■■□□ 2.07
PRKCSH-211ENST00000590098 CEP152O94986 1710 aa27.99■■■□□ 2.07
PRKCSH-211ENST00000590098 RRP7BPQ9NSQ0 103 aa27.99■■■□□ 2.07
PRKCSH-211ENST00000590098 FGD6Q6ZV73 1430 aa27.99■■■□□ 2.07
PRKCSH-211ENST00000590098 CFAP65Q6ZU64 1925 aaKnown RBP27.98■■■□□ 2.07
PRKCSH-211ENST00000590098 UBAP1LF5GYI3 381 aa27.97■■■□□ 2.07
PRKCSH-211ENST00000590098 SPATA31D1Q6ZQQ2 1576 aa27.97■■■□□ 2.07
PRKCSH-211ENST00000590098 NEURL4Q96JN8 1562 aa27.97■■■□□ 2.07
PRKCSH-211ENST00000590098 DAPK1P53355 1430 aa27.96■■■□□ 2.07
PRKCSH-211ENST00000590098 ERBINQ96RT1 1412 aa27.95■■■□□ 2.07
PRKCSH-211ENST00000590098 DISP3Q9P2K9 1392 aa27.95■■■□□ 2.06
PRKCSH-211ENST00000590098 ERVK-7P63135 1459 aa27.95■■■□□ 2.06
PRKCSH-211ENST00000590098 ILDR2Q71H61 639 aa27.93■■■□□ 2.06
PRKCSH-211ENST00000590098 PRDM15P57071 1507 aaPredicted RBP27.91■■■□□ 2.06
PRKCSH-211ENST00000590098 DEPDC5O75140 1603 aa27.9■■■□□ 2.06
PRKCSH-211ENST00000590098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.9■■■□□ 2.066e-8■■□□□ 12.5
PRKCSH-211ENST00000590098 ANKRD30AQ9BXX3 1397 aa27.89■■■□□ 2.06
PRKCSH-211ENST00000590098 CHIC2Q9UKJ5 165 aa27.89■■■□□ 2.06
PRKCSH-211ENST00000590098 NPHP4O75161 1426 aaPredicted RBP27.88■■■□□ 2.05
PRKCSH-211ENST00000590098 MED14O60244 1454 aa27.88■■■□□ 2.05
PRKCSH-211ENST00000590098 KANK1Q14678 1352 aa27.87■■■□□ 2.05
PRKCSH-211ENST00000590098 CPS1P31327 1500 aa27.87■■■□□ 2.05
PRKCSH-211ENST00000590098 ARHGAP31Q2M1Z3 1444 aa27.86■■■□□ 2.05
PRKCSH-211ENST00000590098 IQGAP1P46940 1657 aa27.84■■■□□ 2.05
PRKCSH-211ENST00000590098 UBR1Q8IWV7 1749 aa27.83■■■□□ 2.05
PRKCSH-211ENST00000590098 VWDEQ8N2E2 1590 aa27.82■■■□□ 2.04
PRKCSH-211ENST00000590098 FAM50AQ14320 339 aaKnown RBP27.81■■■□□ 2.04
PRKCSH-211ENST00000590098 PIP4K2BP78356 416 aa27.77■■■□□ 2.04
PRKCSH-211ENST00000590098 TOM1O60784 492 aa27.76■■■□□ 2.03
PRKCSH-211ENST00000590098 LTKP29376 864 aa27.76■■■□□ 2.03
PRKCSH-211ENST00000590098 SCAF1Q9H7N4 1312 aaKnown RBP27.75■■■□□ 2.03
PRKCSH-211ENST00000590098 ADGRL2O95490 1459 aa27.75■■■□□ 2.03
PRKCSH-211ENST00000590098 LMTK2Q8IWU2 1503 aa27.74■■■□□ 2.03
PRKCSH-211ENST00000590098 SCAF11Q99590 1463 aaKnown RBP27.73■■■□□ 2.03
PRKCSH-211ENST00000590098 HSPA1LP34931 641 aa27.73■■■□□ 2.03
PRKCSH-211ENST00000590098 STAG3Q9UJ98 1225 aa27.73■■■□□ 2.03
PRKCSH-211ENST00000590098 TXNDC2Q86VQ3 553 aa27.72■■■□□ 2.03
PRKCSH-211ENST00000590098 EID1Q9Y6B2 187 aa27.72■■■□□ 2.03
PRKCSH-211ENST00000590098 SLIT1O75093 1534 aa27.71■■■□□ 2.03
PRKCSH-211ENST00000590098 PIK3C2BO00750 1634 aa27.7■■■□□ 2.03
PRKCSH-211ENST00000590098 ARHGAP23Q9P227 1491 aa27.7■■■□□ 2.03
PRKCSH-211ENST00000590098 STRCP1A6NGW2 1772 aa27.68■■■□□ 2.02
PRKCSH-211ENST00000590098 ANKRD50Q9ULJ7 1429 aa27.67■■■□□ 2.02
PRKCSH-211ENST00000590098 IDI1Q13907 227 aa27.66■■■□□ 2.02
PRKCSH-211ENST00000590098 ALKQ9UM73 1620 aa27.66■■■□□ 2.02
PRKCSH-211ENST00000590098 EFCAB6Q5THR3 1501 aa27.66■■■□□ 2.02
PRKCSH-211ENST00000590098 SOCS7O14512 581 aa27.65■■■□□ 2.02
PRKCSH-211ENST00000590098 KDM5AP29375 1690 aaKnown RBP27.65■■■□□ 2.02
PRKCSH-211ENST00000590098 TMEM2Q9UHN6 1383 aa27.64■■■□□ 2.02
PRKCSH-211ENST00000590098 LRRC7Q96NW7 1537 aa27.64■■■□□ 2.02
PRKCSH-211ENST00000590098 SYNMO15061 1565 aa27.63■■■□□ 2.01
PRKCSH-211ENST00000590098 NOS1P29475 1434 aa27.6■■■□□ 2.01
PRKCSH-211ENST00000590098 SLC52A1Q9NWF4 448 aa27.59■■■□□ 2.01
PRKCSH-211ENST00000590098 RPRD2Q5VT52 1461 aaKnown RBP27.57■■■□□ 2
PRKCSH-211ENST00000590098 ADGRB3O60242 1522 aa27.55■■■□□ 2
PRKCSH-211ENST00000590098 TET3O43151 1660 aa27.54■■■□□ 2
PRKCSH-211ENST00000590098 SENP3Q9H4L4 574 aaPredicted RBP27.54■■■□□ 2
PRKCSH-211ENST00000590098 ROCK1Q13464 1354 aa27.52■■■□□ 2
PRKCSH-211ENST00000590098 GCC2Q8IWJ2 1684 aa27.5■■□□□ 1.99
PRKCSH-211ENST00000590098 SLC26A8Q96RN1 970 aa27.5■■□□□ 1.99
PRKCSH-211ENST00000590098 UNC13BO14795 1591 aa27.5■■□□□ 1.99
PRKCSH-211ENST00000590098 ITGAEP38570 1179 aa27.48■■□□□ 1.99
PRKCSH-211ENST00000590098 PPARGC1BQ86YN6 1023 aaKnown RBP27.48■■□□□ 1.99
PRKCSH-211ENST00000590098 BCANQ96GW7 911 aa27.48■■□□□ 1.99
PRKCSH-211ENST00000590098 XIRP1Q702N8 1843 aaKnown RBP27.46■■□□□ 1.99
PRKCSH-211ENST00000590098 MYO5BQ9ULV0 1848 aa27.44■■□□□ 1.98
PRKCSH-211ENST00000590098 KCNA6P17658 529 aa27.44■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms