RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 COL17A1Q9UMD9 1497 aaPredicted RBP25.5■■□□□ 1.67
CXXC1-212ENST00000589940 DIP2CQ9Y2E4 1556 aa25.5■■□□□ 1.67
CXXC1-212ENST00000589940 YEATS2Q9ULM3 1422 aa25.47■■□□□ 1.67
CXXC1-212ENST00000589940 FAM135AQ9P2D6 1515 aa25.46■■□□□ 1.67
CXXC1-212ENST00000589940 DEPDC5O75140 1603 aa25.45■■□□□ 1.67
CXXC1-212ENST00000589940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.45■■□□□ 1.663e-7■■■□□ 17.2
CXXC1-212ENST00000589940 IQGAP3Q86VI3 1631 aa25.44■■□□□ 1.66
CXXC1-212ENST00000589940 KIF3BO15066 747 aa25.44■■□□□ 1.66
CXXC1-212ENST00000589940 PKD2Q13563 968 aa25.42■■□□□ 1.66
CXXC1-212ENST00000589940 FOXD1Q16676 465 aa25.42■■□□□ 1.66
CXXC1-212ENST00000589940 SIN3AQ96ST3 1273 aa25.41■■□□□ 1.66
CXXC1-212ENST00000589940 BCORL1Q5H9F3 1711 aa25.4■■□□□ 1.66
CXXC1-212ENST00000589940 ANKRD30BQ9BXX2 1392 aa25.39■■□□□ 1.66
CXXC1-212ENST00000589940 PRDM15P57071 1507 aaPredicted RBP25.39■■□□□ 1.66
CXXC1-212ENST00000589940 RNF17Q9BXT8 1623 aaKnown RBP25.38■■□□□ 1.65
CXXC1-212ENST00000589940 MROH1Q8NDA8 1641 aa25.38■■□□□ 1.65
CXXC1-212ENST00000589940 ATP10AO60312 1499 aa25.38■■□□□ 1.65
CXXC1-212ENST00000589940 NEUROD1Q13562 356 aa25.37■■□□□ 1.65
CXXC1-212ENST00000589940 KANK1Q14678 1352 aa25.37■■□□□ 1.65
CXXC1-212ENST00000589940 VWDEQ8N2E2 1590 aa25.36■■□□□ 1.65
CXXC1-212ENST00000589940 REREQ9P2R6 1566 aa25.35■■□□□ 1.65
CXXC1-212ENST00000589940 ARHGEF40Q8TER5 1519 aa25.34■■□□□ 1.65
CXXC1-212ENST00000589940 TIMELESSQ9UNS1 1208 aa25.32■■□□□ 1.64
CXXC1-212ENST00000589940 TET3O43151 1660 aa25.28■■□□□ 1.64
CXXC1-212ENST00000589940 GGT6Q6P531 493 aa25.28■■□□□ 1.64
CXXC1-212ENST00000589940 AGLP35573 1532 aa25.27■■□□□ 1.64
CXXC1-212ENST00000589940 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
CXXC1-212ENST00000589940 RPRD2Q5VT52 1461 aaKnown RBP25.26■■□□□ 1.63
CXXC1-212ENST00000589940 TONSLQ96HA7 1378 aa25.25■■□□□ 1.63
CXXC1-212ENST00000589940 E9PCH4 1651 aa25.22■■□□□ 1.63
CXXC1-212ENST00000589940 EFCAB6Q5THR3 1501 aa25.21■■□□□ 1.63
CXXC1-212ENST00000589940 ABCC3O15438 1527 aa25.21■■□□□ 1.63
CXXC1-212ENST00000589940 PLA2R1Q13018 1463 aa25.2■■□□□ 1.63
CXXC1-212ENST00000589940 CEP152O94986 1710 aa25.2■■□□□ 1.62
CXXC1-212ENST00000589940 WASHC2CQ9Y4E1 1318 aa25.19■■□□□ 1.62
CXXC1-212ENST00000589940 SIGLEC1Q9BZZ2 1709 aa25.18■■□□□ 1.62
CXXC1-212ENST00000589940 ZC3H13Q5T200 1668 aaKnown RBP25.16■■□□□ 1.62
CXXC1-212ENST00000589940 CCDC144AA2RUR9 1427 aa25.16■■□□□ 1.62
CXXC1-212ENST00000589940 PTPRTO14522 1441 aa25.15■■□□□ 1.62
CXXC1-212ENST00000589940 PPP6R1Q9UPN7 881 aa25.13■■□□□ 1.61
CXXC1-212ENST00000589940 TRPM2O94759 1503 aa25.12■■□□□ 1.61
CXXC1-212ENST00000589940 PPP1R15AO75807 674 aaPredicted RBP25.12■■□□□ 1.61
CXXC1-212ENST00000589940 SPHKAPQ2M3C7 1700 aa25.12■■□□□ 1.61
CXXC1-212ENST00000589940 CAMSAP1Q5T5Y3 1602 aa25.12■■□□□ 1.61
CXXC1-212ENST00000589940 NPATQ14207 1427 aa25.11■■□□□ 1.61
CXXC1-212ENST00000589940 L3MBTL2Q969R5 705 aa25.09■■□□□ 1.61
CXXC1-212ENST00000589940 ARHGAP31Q2M1Z3 1444 aa25.09■■□□□ 1.61
CXXC1-212ENST00000589940 ARID4BQ4LE39 1312 aaPredicted RBP25.06■■□□□ 1.6
CXXC1-212ENST00000589940 MLECQ14165 292 aa25.05■■□□□ 1.6
CXXC1-212ENST00000589940 CNTLNQ9NXG0 1405 aa25.02■■□□□ 1.6
CXXC1-212ENST00000589940 CLTCL1P53675 1640 aa25.01■■□□□ 1.59
CXXC1-212ENST00000589940 NOS1P29475 1434 aa24.99■■□□□ 1.59
CXXC1-212ENST00000589940 CLTCQ00610 1675 aaKnown RBP24.99■■□□□ 1.59
CXXC1-212ENST00000589940 SPATA31E1Q6ZUB1 1445 aa24.97■■□□□ 1.59
CXXC1-212ENST00000589940 UGGT1Q9NYU2 1555 aa24.96■■□□□ 1.59
CXXC1-212ENST00000589940 ESF1Q9H501 851 aaKnown RBP24.96■■□□□ 1.59
CXXC1-212ENST00000589940 CFAP65Q6ZU64 1925 aaKnown RBP24.94■■□□□ 1.58
CXXC1-212ENST00000589940 NEURL4Q96JN8 1562 aa24.93■■□□□ 1.58
CXXC1-212ENST00000589940 RGL3Q3MIN7 710 aa24.93■■□□□ 1.58
CXXC1-212ENST00000589940 SYNMO15061 1565 aa24.92■■□□□ 1.58
CXXC1-212ENST00000589940 PREX1Q8TCU6 1659 aa24.92■■□□□ 1.58
CXXC1-212ENST00000589940 DCAF11Q8TEB1 546 aa24.9■■□□□ 1.58
CXXC1-212ENST00000589940 ERVK-7P63135 1459 aa24.9■■□□□ 1.58
CXXC1-212ENST00000589940 PIK3C2BO00750 1634 aa24.89■■□□□ 1.58
CXXC1-212ENST00000589940 ZMYM3Q14202 1370 aa24.89■■□□□ 1.57
CXXC1-212ENST00000589940 UHRF1BP1Q6BDS2 1440 aa24.89■■□□□ 1.57
CXXC1-212ENST00000589940 NBPF8Q3BBV2 869 aa24.89■■□□□ 1.57
CXXC1-212ENST00000589940 KIF1BO60333 1816 aa24.88■■□□□ 1.57
CXXC1-212ENST00000589940 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
CXXC1-212ENST00000589940 SLC52A1Q9NWF4 448 aa24.86■■□□□ 1.57
CXXC1-212ENST00000589940 SPATA31D1Q6ZQQ2 1576 aa24.85■■□□□ 1.57
CXXC1-212ENST00000589940 MROH2AA6NES4 1674 aa24.85■■□□□ 1.57
CXXC1-212ENST00000589940 KDM2AQ9Y2K7 1162 aa24.85■■□□□ 1.57
CXXC1-212ENST00000589940 ADGRB3O60242 1522 aa24.85■■□□□ 1.57
CXXC1-212ENST00000589940 ZNF316A6NFI3 1004 aaPredicted RBP24.84■■□□□ 1.57
CXXC1-212ENST00000589940 ZNF326Q5BKZ1 582 aaKnown RBP24.83■■□□□ 1.57
CXXC1-212ENST00000589940 IDI1Q13907 227 aa24.81■■□□□ 1.56
CXXC1-212ENST00000589940 STAC3Q96MF2 364 aa24.81■■□□□ 1.56
CXXC1-212ENST00000589940 FER1L4A9Z1Z3 1794 aa24.81■■□□□ 1.56
CXXC1-212ENST00000589940 PRAG1Q86YV5 1406 aa24.81■■□□□ 1.56
CXXC1-212ENST00000589940 CHGAP10645 457 aaKnown RBP24.79■■□□□ 1.56
CXXC1-212ENST00000589940 RALGAPBQ86X10 1494 aa24.77■■□□□ 1.56
CXXC1-212ENST00000589940 MYOM2P54296 1465 aa24.74■■□□□ 1.55
CXXC1-212ENST00000589940 IFT172Q9UG01 1749 aa24.73■■□□□ 1.55
CXXC1-212ENST00000589940 RPGRIP1LQ68CZ1 1315 aa24.73■■□□□ 1.55
CXXC1-212ENST00000589940 TMEM131LA2VDJ0 1609 aa24.72■■□□□ 1.55
CXXC1-212ENST00000589940 TNRQ92752 1358 aa24.72■■□□□ 1.55
CXXC1-212ENST00000589940 MADDQ8WXG6 1647 aa24.72■■□□□ 1.55
CXXC1-212ENST00000589940 C3P01024 1663 aa24.72■■□□□ 1.55
CXXC1-212ENST00000589940 TRPM1Q7Z4N2 1603 aa24.7■■□□□ 1.54
CXXC1-212ENST00000589940 ADAMTSL3P82987 1691 aa24.7■■□□□ 1.54
CXXC1-212ENST00000589940 CEBPAP49715 358 aaPredicted RBP24.69■■□□□ 1.54
CXXC1-212ENST00000589940 PPLO60437 1756 aa24.68■■□□□ 1.54
CXXC1-212ENST00000589940 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.54
CXXC1-212ENST00000589940 NRXN1Q9ULB1 1477 aa24.67■■□□□ 1.54
CXXC1-212ENST00000589940 ROCK2O75116 1388 aaKnown RBP24.67■■□□□ 1.54
CXXC1-212ENST00000589940 NEXMIFQ5QGS0 1516 aa24.66■■□□□ 1.54
CXXC1-212ENST00000589940 STAG3Q9UJ98 1225 aa24.66■■□□□ 1.54
CXXC1-212ENST00000589940 RIMS1Q86UR5 1692 aaKnown RBP24.65■■□□□ 1.54
CXXC1-212ENST00000589940 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms