RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MAPK8IP3Q9UPT6 1336 aa19.04■□□□□ 0.64
RETREG3-208ENST00000589797 ARXQ96QS3 562 aa19.03■□□□□ 0.64
RETREG3-208ENST00000589797 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
RETREG3-208ENST00000589797 MYBBP1AQ9BQG0 1328 aaKnown RBP19.02■□□□□ 0.63
RETREG3-208ENST00000589797 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.02■□□□□ 0.63
RETREG3-208ENST00000589797 CLUAP1Q96AJ1 413 aa19■□□□□ 0.63
RETREG3-208ENST00000589797 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
RETREG3-208ENST00000589797 FTSJ3Q8IY81 847 aaKnown RBP19■□□□□ 0.63
RETREG3-208ENST00000589797 SUPT6HQ7KZ85 1726 aaKnown RBP18.99■□□□□ 0.63
RETREG3-208ENST00000589797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.63
RETREG3-208ENST00000589797 SCAPERQ9BY12 1400 aa18.99■□□□□ 0.63
RETREG3-208ENST00000589797 MINK1Q8N4C8 1332 aaPredicted RBP18.99■□□□□ 0.63
RETREG3-208ENST00000589797 THOC2Q8NI27 1593 aaKnown RBP18.99■□□□□ 0.63
RETREG3-208ENST00000589797 CUL7Q14999 1698 aa18.98■□□□□ 0.63
RETREG3-208ENST00000589797 BCL2L13Q9BXK5 485 aa18.98■□□□□ 0.63
RETREG3-208ENST00000589797 CDCA7LQ96GN5 454 aa18.98■□□□□ 0.63
RETREG3-208ENST00000589797 HECW1Q76N89 1606 aa18.98■□□□□ 0.63
RETREG3-208ENST00000589797 APAF1O14727 1248 aa18.97■□□□□ 0.63
RETREG3-208ENST00000589797 ANKRD30BQ9BXX2 1392 aa18.97■□□□□ 0.63
RETREG3-208ENST00000589797 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
RETREG3-208ENST00000589797 KIAA1107Q9UPP5 1409 aa18.97■□□□□ 0.63
RETREG3-208ENST00000589797 EXOC6Q8TAG9 804 aa18.96■□□□□ 0.63
RETREG3-208ENST00000589797 PTPN23Q9H3S7 1636 aa18.96■□□□□ 0.62
RETREG3-208ENST00000589797 ZBED9Q6R2W3 1325 aa18.96■□□□□ 0.62
RETREG3-208ENST00000589797 MAPKBP1O60336 1514 aa18.95■□□□□ 0.62
RETREG3-208ENST00000589797 UPF2Q9HAU5 1272 aaKnown RBP18.94■□□□□ 0.62
RETREG3-208ENST00000589797 MAP3K1Q13233 1512 aa18.94■□□□□ 0.62
RETREG3-208ENST00000589797 ANP32EQ9BTT0 268 aa18.94■□□□□ 0.62
RETREG3-208ENST00000589797 NCOA1Q15788 1441 aa18.93■□□□□ 0.62
RETREG3-208ENST00000589797 GOLGA2Q08379 1002 aa18.92■□□□□ 0.62
RETREG3-208ENST00000589797 HSP90AA1P07900 732 aaKnown RBP18.92■□□□□ 0.62
RETREG3-208ENST00000589797 ADAMTS8Q9UP79 889 aa18.91■□□□□ 0.62
RETREG3-208ENST00000589797 MAGI1Q96QZ7 1491 aaPredicted RBP18.91■□□□□ 0.62
RETREG3-208ENST00000589797 CAMSAP2Q08AD1 1489 aa18.89■□□□□ 0.61
RETREG3-208ENST00000589797 CABP2Q9NPB3 220 aa18.88■□□□□ 0.61
RETREG3-208ENST00000589797 ELL2O00472 640 aaPredicted RBP18.88■□□□□ 0.61
RETREG3-208ENST00000589797 HDGFL2Q7Z4V5 671 aaPredicted RBP18.87■□□□□ 0.61
RETREG3-208ENST00000589797 SLC12A5Q9H2X9 1139 aa18.87■□□□□ 0.61
RETREG3-208ENST00000589797 A0A0G2JS52 829 aa18.87■□□□□ 0.61
RETREG3-208ENST00000589797 VGFO15240 615 aaPredicted RBP18.86■□□□□ 0.61
RETREG3-208ENST00000589797 PAK3O75914 559 aaPredicted RBP18.85■□□□□ 0.61
RETREG3-208ENST00000589797 NUP153P49790 1475 aaKnown RBP18.85■□□□□ 0.61
RETREG3-208ENST00000589797 EIF3AQ14152 1382 aaKnown RBP18.85■□□□□ 0.61
RETREG3-208ENST00000589797 PNISRQ8TF01 805 aaKnown RBP18.84■□□□□ 0.61
RETREG3-208ENST00000589797 GGNBP2Q9H3C7 697 aa18.84■□□□□ 0.61
RETREG3-208ENST00000589797 GPATCH8Q9UKJ3 1502 aaKnown RBP18.83■□□□□ 0.61
RETREG3-208ENST00000589797 ROCK1Q13464 1354 aa18.83■□□□□ 0.61
RETREG3-208ENST00000589797 CRBNQ96SW2 442 aa18.82■□□□□ 0.6
RETREG3-208ENST00000589797 AKNAQ7Z591 1439 aa18.82■□□□□ 0.6
RETREG3-208ENST00000589797 CENPJQ9HC77 1338 aaPredicted RBP18.81■□□□□ 0.6
RETREG3-208ENST00000589797 APBB1O00213 710 aa18.81■□□□□ 0.6
RETREG3-208ENST00000589797 TCERG1O14776 1098 aaKnown RBP18.81■□□□□ 0.6
RETREG3-208ENST00000589797 KIF21AQ7Z4S6 1674 aa18.81■□□□□ 0.6
RETREG3-208ENST00000589797 ATP10BO94823 1461 aa18.81■□□□□ 0.6
RETREG3-208ENST00000589797 RRP1P56182 461 aaKnown RBP18.8■□□□□ 0.6
RETREG3-208ENST00000589797 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
RETREG3-208ENST00000589797 TERF2IPQ9NYB0 399 aa18.79■□□□□ 0.6
RETREG3-208ENST00000589797 SPRYD3Q8NCJ5 442 aa18.78■□□□□ 0.6
RETREG3-208ENST00000589797 MYH16Q9H6N6 1097 aa18.78■□□□□ 0.6
RETREG3-208ENST00000589797 PLEKHH2Q8IVE3 1493 aa18.77■□□□□ 0.6
RETREG3-208ENST00000589797 LTV1Q96GA3 475 aaPredicted RBP18.77■□□□□ 0.6
RETREG3-208ENST00000589797 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
RETREG3-208ENST00000589797 HDGFP51858 240 aaKnown RBP18.76■□□□□ 0.59
RETREG3-208ENST00000589797 PDE3BQ13370 1112 aa18.76■□□□□ 0.59
RETREG3-208ENST00000589797 UGGT2Q9NYU1 1516 aa18.75■□□□□ 0.59
RETREG3-208ENST00000589797 PPP2R1AP30153 589 aa18.75■□□□□ 0.59
RETREG3-208ENST00000589797 MTHFSP49914 203 aa18.75■□□□□ 0.59
RETREG3-208ENST00000589797 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
RETREG3-208ENST00000589797 EVC2Q86UK5 1308 aa18.75■□□□□ 0.59
RETREG3-208ENST00000589797 ITPRIPQ8IWB1 547 aa18.74■□□□□ 0.59
RETREG3-208ENST00000589797 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
RETREG3-208ENST00000589797 CGNL1Q0VF96 1302 aa18.72■□□□□ 0.59
RETREG3-208ENST00000589797 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
RETREG3-208ENST00000589797 RPRD2Q5VT52 1461 aaKnown RBP18.72■□□□□ 0.59
RETREG3-208ENST00000589797 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
RETREG3-208ENST00000589797 NGDNQ8NEJ9 315 aaKnown RBP18.71■□□□□ 0.59
RETREG3-208ENST00000589797 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.58
RETREG3-208ENST00000589797 HMOX1P09601 288 aa18.7■□□□□ 0.58
RETREG3-208ENST00000589797 SKAP1Q86WV1 359 aa18.7■□□□□ 0.58
RETREG3-208ENST00000589797 PRAM1Q96QH2 718 aa18.69■□□□□ 0.58
RETREG3-208ENST00000589797 HAP1P54257 671 aaPredicted RBP18.68■□□□□ 0.58
RETREG3-208ENST00000589797 FBXO31Q5XUX0 539 aaPredicted RBP18.67■□□□□ 0.58
RETREG3-208ENST00000589797 MAGI3Q5TCQ9 1506 aa18.67■□□□□ 0.58
RETREG3-208ENST00000589797 DISP1Q96F81 1524 aa18.67■□□□□ 0.58
RETREG3-208ENST00000589797 CTTNBP2Q8WZ74 1663 aa18.66■□□□□ 0.58
RETREG3-208ENST00000589797 TPRNQ4KMQ1 711 aa18.66■□□□□ 0.58
RETREG3-208ENST00000589797 NUTM2GQ5VZR2 741 aa18.65■□□□□ 0.58
RETREG3-208ENST00000589797 TXNDC2Q86VQ3 553 aa18.65■□□□□ 0.58
RETREG3-208ENST00000589797 BRD4O60885 1362 aaPredicted RBP18.65■□□□□ 0.58
RETREG3-208ENST00000589797 PANK1Q8TE04 598 aa18.65■□□□□ 0.58
RETREG3-208ENST00000589797 TCP11L2Q8N4U5 519 aa18.64■□□□□ 0.57
RETREG3-208ENST00000589797 ADAMTS12P58397 1594 aa18.64■□□□□ 0.57
RETREG3-208ENST00000589797 EID1Q9Y6B2 187 aa18.64■□□□□ 0.57
RETREG3-208ENST00000589797 DDRGK1Q96HY6 314 aa18.64■□□□□ 0.57
RETREG3-208ENST00000589797 RAPGEF6Q8TEU7 1601 aa18.63■□□□□ 0.57
RETREG3-208ENST00000589797 PNNQ9H307 717 aaKnown RBP18.63■□□□□ 0.57
RETREG3-208ENST00000589797 BCAR3O75815 825 aa18.63■□□□□ 0.57
RETREG3-208ENST00000589797 PDE4AP27815 886 aa18.63■□□□□ 0.57
RETREG3-208ENST00000589797 RTF1Q92541 710 aaKnown RBP18.62■□□□□ 0.57
RETREG3-208ENST00000589797 ERBINQ96RT1 1412 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 119.5 ms