RNA–Protein interactions for RNA: ENST00000589760.1

RFX1-206, Transcript of regulatory factor X1, humanhuman

TSL 5

Gene RFX1, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-206ENST00000589760 MBD5Q9P267 1494 aa22.54■■□□□ 1.2
RFX1-206ENST00000589760 AMER1Q5JTC6 1135 aaPredicted RBP22.54■■□□□ 1.2
RFX1-206ENST00000589760 MIA2Q96PC5 1412 aa22.54■■□□□ 1.2
RFX1-206ENST00000589760 REREQ9P2R6 1566 aa22.54■■□□□ 1.2
RFX1-206ENST00000589760 ATP7AQ04656 1500 aa22.53■■□□□ 1.2
RFX1-206ENST00000589760 SPAG9O60271 1321 aaKnown RBP22.53■■□□□ 1.2
RFX1-206ENST00000589760 ARHGEF5Q12774 1597 aa22.52■■□□□ 1.2
RFX1-206ENST00000589760 ADGBQ8N7X0 1667 aa22.51■■□□□ 1.19
RFX1-206ENST00000589760 FER1L4A9Z1Z3 1794 aa22.5■■□□□ 1.19
RFX1-206ENST00000589760 RSPH4AQ5TD94 716 aa22.5■■□□□ 1.19
RFX1-206ENST00000589760 MADDQ8WXG6 1647 aa22.49■■□□□ 1.19
RFX1-206ENST00000589760 PTPN23Q9H3S7 1636 aa22.49■■□□□ 1.19
RFX1-206ENST00000589760 CCDC141Q6ZP82 1450 aa22.49■■□□□ 1.19
RFX1-206ENST00000589760 RIMS1Q86UR5 1692 aaKnown RBP22.48■■□□□ 1.19
RFX1-206ENST00000589760 SSUH2Q9Y2M2 353 aa22.45■■□□□ 1.18
RFX1-206ENST00000589760 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.18
RFX1-206ENST00000589760 AGLP35573 1532 aa22.44■■□□□ 1.18
RFX1-206ENST00000589760 RTN4Q9NQC3 1192 aaKnown RBP22.43■■□□□ 1.18
RFX1-206ENST00000589760 CROCC2H7BZ55 1655 aa22.42■■□□□ 1.18
RFX1-206ENST00000589760 FGD6Q6ZV73 1430 aa22.42■■□□□ 1.18
RFX1-206ENST00000589760 MLECQ14165 292 aa22.42■■□□□ 1.18
RFX1-206ENST00000589760 MAST1Q9Y2H9 1570 aa22.41■■□□□ 1.18
RFX1-206ENST00000589760 TSPY4P0CV99 314 aa22.4■■□□□ 1.18
RFX1-206ENST00000589760 TSPY10P0CW01 314 aa22.4■■□□□ 1.18
RFX1-206ENST00000589760 PLXNC1O60486 1568 aa22.39■■□□□ 1.18
RFX1-206ENST00000589760 A2MP01023 1474 aa22.39■■□□□ 1.17
RFX1-206ENST00000589760 TCOF1Q13428 1488 aaKnown RBP22.39■■□□□ 1.17
RFX1-206ENST00000589760 PTPRMP28827 1452 aa22.38■■□□□ 1.17
RFX1-206ENST00000589760 DNMT1P26358 1616 aaKnown RBP22.38■■□□□ 1.17
RFX1-206ENST00000589760 VASPP50552 380 aaPredicted RBP22.32■■□□□ 1.16
RFX1-206ENST00000589760 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
RFX1-206ENST00000589760 SHANK2Q9UPX8 1470 aa22.3■■□□□ 1.16
RFX1-206ENST00000589760 DHX29Q7Z478 1369 aaKnown RBP22.3■■□□□ 1.16
RFX1-206ENST00000589760 ABCC5O15440 1437 aa22.3■■□□□ 1.16
RFX1-206ENST00000589760 DAPK1P53355 1430 aa22.3■■□□□ 1.16
RFX1-206ENST00000589760 SETD1BQ9UPS6 1966 aaKnown RBP22.29■■□□□ 1.16
RFX1-206ENST00000589760 C3P01024 1663 aa22.28■■□□□ 1.16
RFX1-206ENST00000589760 MROH2AA6NES4 1674 aa22.27■■□□□ 1.16
RFX1-206ENST00000589760 CLTCQ00610 1675 aaKnown RBP22.26■■□□□ 1.15
RFX1-206ENST00000589760 FAM50AQ14320 339 aaKnown RBP22.26■■□□□ 1.15
RFX1-206ENST00000589760 ESF1Q9H501 851 aaKnown RBP22.26■■□□□ 1.15
RFX1-206ENST00000589760 EIF2AK4Q9P2K8 1649 aaKnown RBP22.24■■□□□ 1.15
RFX1-206ENST00000589760 GGT6Q6P531 493 aa22.23■■□□□ 1.15
RFX1-206ENST00000589760 CNTLNQ9NXG0 1405 aa22.23■■□□□ 1.15
RFX1-206ENST00000589760 DUOX2Q9NRD8 1548 aa22.22■■□□□ 1.15
RFX1-206ENST00000589760 KIF3BO15066 747 aa22.2■■□□□ 1.14
RFX1-206ENST00000589760 PREX1Q8TCU6 1659 aa22.18■■□□□ 1.14
RFX1-206ENST00000589760 RNF17Q9BXT8 1623 aaKnown RBP22.18■■□□□ 1.14
RFX1-206ENST00000589760 ANKRD30AQ9BXX3 1397 aa22.17■■□□□ 1.14
RFX1-206ENST00000589760 CHIC2Q9UKJ5 165 aa22.17■■□□□ 1.14
RFX1-206ENST00000589760 KIF15Q9NS87 1388 aa22.16■■□□□ 1.14
RFX1-206ENST00000589760 CEBPAP49715 358 aaPredicted RBP22.16■■□□□ 1.14
RFX1-206ENST00000589760 ADGRL2O95490 1459 aa22.15■■□□□ 1.14
RFX1-206ENST00000589760 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.15■■□□□ 1.14
RFX1-206ENST00000589760 RRP7BPQ9NSQ0 103 aa22.15■■□□□ 1.14
RFX1-206ENST00000589760 FAM135AQ9P2D6 1515 aa22.15■■□□□ 1.14
RFX1-206ENST00000589760 RBM42Q9BTD8 480 aaKnown RBP22.14■■□□□ 1.13
RFX1-206ENST00000589760 STAG3Q9UJ98 1225 aa22.14■■□□□ 1.13
RFX1-206ENST00000589760 NCOA1Q15788 1441 aa22.14■■□□□ 1.13
RFX1-206ENST00000589760 ERBINQ96RT1 1412 aa22.14■■□□□ 1.13
RFX1-206ENST00000589760 ZC3H13Q5T200 1668 aaKnown RBP22.14■■□□□ 1.13
RFX1-206ENST00000589760 ZMYM3Q14202 1370 aa22.12■■□□□ 1.13
RFX1-206ENST00000589760 KDM5DQ9BY66 1539 aa22.12■■□□□ 1.13
RFX1-206ENST00000589760 CEP152O94986 1710 aa22.12■■□□□ 1.13
RFX1-206ENST00000589760 CFAP65Q6ZU64 1925 aaKnown RBP22.12■■□□□ 1.13
RFX1-206ENST00000589760 RRBP1Q9P2E9 1410 aaKnown RBP22.12■■□□□ 1.13
RFX1-206ENST00000589760 DEPDC5O75140 1603 aa22.09■■□□□ 1.13
RFX1-206ENST00000589760 MROH1Q8NDA8 1641 aa22.09■■□□□ 1.13
RFX1-206ENST00000589760 LMTK3Q96Q04 1460 aa22.09■■□□□ 1.13
RFX1-206ENST00000589760 PTPRKQ15262 1439 aa22.08■■□□□ 1.13
RFX1-206ENST00000589760 WASHC2CQ9Y4E1 1318 aa22.07■■□□□ 1.12
RFX1-206ENST00000589760 ITGAEP38570 1179 aa22.05■■□□□ 1.12
RFX1-206ENST00000589760 PRDM15P57071 1507 aaPredicted RBP22.05■■□□□ 1.12
RFX1-206ENST00000589760 NPATQ14207 1427 aa22.04■■□□□ 1.12
RFX1-206ENST00000589760 ROCK1Q13464 1354 aa22.03■■□□□ 1.12
RFX1-206ENST00000589760 CAMSAP1Q5T5Y3 1602 aa22.03■■□□□ 1.12
RFX1-206ENST00000589760 ABCC3O15438 1527 aa22.03■■□□□ 1.12
RFX1-206ENST00000589760 UHRF1BP1Q6BDS2 1440 aa22.03■■□□□ 1.12
RFX1-206ENST00000589760 IFNLR1Q8IU57 520 aaPredicted RBP22.02■■□□□ 1.12
RFX1-206ENST00000589760 ANKRD50Q9ULJ7 1429 aa22.01■■□□□ 1.11
RFX1-206ENST00000589760 MYO3AQ8NEV4 1616 aa21.99■■□□□ 1.11
RFX1-206ENST00000589760 PZPP20742 1482 aa21.99■■□□□ 1.11
RFX1-206ENST00000589760 ZNF142P52746 1687 aaPredicted RBP21.98■■□□□ 1.11
RFX1-206ENST00000589760 KANK1Q14678 1352 aa21.98■■□□□ 1.11
RFX1-206ENST00000589760 AKT1S1Q96B36 256 aa21.96■■□□□ 1.11
RFX1-206ENST00000589760 VWDEQ8N2E2 1590 aa21.95■■□□□ 1.11
RFX1-206ENST00000589760 HSPA2P54652 639 aa21.95■■□□□ 1.1
RFX1-206ENST00000589760 UNC13BO14795 1591 aa21.95■■□□□ 1.1
RFX1-206ENST00000589760 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.1
RFX1-206ENST00000589760 FBXO31Q5XUX0 539 aaPredicted RBP21.92■■□□□ 1.1
RFX1-206ENST00000589760 CEP170BQ9Y4F5 1589 aaPredicted RBP21.91■■□□□ 1.1
RFX1-206ENST00000589760 LMTK2Q8IWU2 1503 aa21.91■■□□□ 1.1
RFX1-206ENST00000589760 STRCQ7RTU9 1775 aa21.91■■□□□ 1.1
RFX1-206ENST00000589760 SPATA31D1Q6ZQQ2 1576 aa21.91■■□□□ 1.1
RFX1-206ENST00000589760 ARHGAP31Q2M1Z3 1444 aa21.89■■□□□ 1.1
RFX1-206ENST00000589760 TNRQ92752 1358 aa21.89■■□□□ 1.1
RFX1-206ENST00000589760 TET3O43151 1660 aa21.88■■□□□ 1.09
RFX1-206ENST00000589760 PLCD3Q8N3E9 789 aa21.87■■□□□ 1.09
RFX1-206ENST00000589760 ERVK-7P63135 1459 aa21.87■■□□□ 1.09
RFX1-206ENST00000589760 IQGAP3Q86VI3 1631 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms