RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 MYO3AQ8NEV4 1616 aa22.53■■□□□ 1.2
MBD1-220ENST00000589758 ZNF142P52746 1687 aaPredicted RBP22.52■■□□□ 1.2
MBD1-220ENST00000589758 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.19
MBD1-220ENST00000589758 WASHC2CQ9Y4E1 1318 aa22.51■■□□□ 1.19
MBD1-220ENST00000589758 CEP170BQ9Y4F5 1589 aaPredicted RBP22.5■■□□□ 1.19
MBD1-220ENST00000589758 PLA2R1Q13018 1463 aa22.47■■□□□ 1.19
MBD1-220ENST00000589758 PKD2Q13563 968 aa22.47■■□□□ 1.19
MBD1-220ENST00000589758 PZPP20742 1482 aa22.47■■□□□ 1.19
MBD1-220ENST00000589758 A2ML1A8K2U0 1454 aa22.44■■□□□ 1.18
MBD1-220ENST00000589758 EIF2AK4Q9P2K8 1649 aaKnown RBP22.44■■□□□ 1.18
MBD1-220ENST00000589758 RNF17Q9BXT8 1623 aaKnown RBP22.43■■□□□ 1.18
MBD1-220ENST00000589758 TNRQ92752 1358 aa22.43■■□□□ 1.18
MBD1-220ENST00000589758 NCKAP5LQ9HCH0 1330 aa22.43■■□□□ 1.18
MBD1-220ENST00000589758 FBXO31Q5XUX0 539 aaPredicted RBP22.43■■□□□ 1.18
MBD1-220ENST00000589758 PTPN23Q9H3S7 1636 aa22.42■■□□□ 1.18
MBD1-220ENST00000589758 DUOX2Q9NRD8 1548 aa22.41■■□□□ 1.18
MBD1-220ENST00000589758 TCOF1Q13428 1488 aaKnown RBP22.41■■□□□ 1.18
MBD1-220ENST00000589758 SHANK2Q9UPX8 1470 aa22.41■■□□□ 1.18
MBD1-220ENST00000589758 DNMT1P26358 1616 aaKnown RBP22.4■■□□□ 1.18
MBD1-220ENST00000589758 ZC3H13Q5T200 1668 aaKnown RBP22.39■■□□□ 1.18
MBD1-220ENST00000589758 ABCC5O15440 1437 aa22.39■■□□□ 1.17
MBD1-220ENST00000589758 FGD6Q6ZV73 1430 aa22.39■■□□□ 1.17
MBD1-220ENST00000589758 LTBP4Q8N2S1 1624 aa22.39■■□□□ 1.17
MBD1-220ENST00000589758 CROCC2H7BZ55 1655 aa22.37■■□□□ 1.17
MBD1-220ENST00000589758 ABCC3O15438 1527 aa22.36■■□□□ 1.17
MBD1-220ENST00000589758 KIF15Q9NS87 1388 aa22.36■■□□□ 1.17
MBD1-220ENST00000589758 IQSEC2Q5JU85 1478 aa22.35■■□□□ 1.17
MBD1-220ENST00000589758 NLRP1Q9C000 1473 aa22.35■■□□□ 1.17
MBD1-220ENST00000589758 DAPK1P53355 1430 aa22.35■■□□□ 1.17
MBD1-220ENST00000589758 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
MBD1-220ENST00000589758 MROH1Q8NDA8 1641 aa22.33■■□□□ 1.17
MBD1-220ENST00000589758 THEMISQ8N1K5 641 aaPredicted RBP22.33■■□□□ 1.17
MBD1-220ENST00000589758 RRP7BPQ9NSQ0 103 aa22.32■■□□□ 1.16
MBD1-220ENST00000589758 SPATA31D1Q6ZQQ2 1576 aa22.3■■□□□ 1.16
MBD1-220ENST00000589758 ZNF335Q9H4Z2 1342 aaPredicted RBP22.3■■□□□ 1.16
MBD1-220ENST00000589758 UGGT1Q9NYU2 1555 aa22.29■■□□□ 1.16
MBD1-220ENST00000589758 POLR1AO95602 1720 aaPredicted RBP22.29■■□□□ 1.16
MBD1-220ENST00000589758 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
MBD1-220ENST00000589758 CEP152O94986 1710 aa22.28■■□□□ 1.16
MBD1-220ENST00000589758 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
MBD1-220ENST00000589758 ERVK-7P63135 1459 aa22.28■■□□□ 1.16
MBD1-220ENST00000589758 PRDM15P57071 1507 aaPredicted RBP22.27■■□□□ 1.16
MBD1-220ENST00000589758 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.26■■□□□ 1.15
MBD1-220ENST00000589758 CHIC2Q9UKJ5 165 aa22.25■■□□□ 1.15
MBD1-220ENST00000589758 KANK1Q14678 1352 aa22.25■■□□□ 1.15
MBD1-220ENST00000589758 ARHGAP31Q2M1Z3 1444 aa22.24■■□□□ 1.15
MBD1-220ENST00000589758 NEURL4Q96JN8 1562 aa22.24■■□□□ 1.15
MBD1-220ENST00000589758 DEPDC5O75140 1603 aa22.23■■□□□ 1.15
MBD1-220ENST00000589758 FAM50AQ14320 339 aaKnown RBP22.22■■□□□ 1.15
MBD1-220ENST00000589758 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.22■■□□□ 1.15
MBD1-220ENST00000589758 MED14O60244 1454 aa22.2■■□□□ 1.14
MBD1-220ENST00000589758 ADGRL2O95490 1459 aa22.2■■□□□ 1.14
MBD1-220ENST00000589758 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
MBD1-220ENST00000589758 NPHP4O75161 1426 aaPredicted RBP22.18■■□□□ 1.14
MBD1-220ENST00000589758 CPS1P31327 1500 aa22.16■■□□□ 1.14
MBD1-220ENST00000589758 LMTK2Q8IWU2 1503 aa22.16■■□□□ 1.14
MBD1-220ENST00000589758 UBR1Q8IWV7 1749 aa22.15■■□□□ 1.14
MBD1-220ENST00000589758 VWDEQ8N2E2 1590 aa22.14■■□□□ 1.13
MBD1-220ENST00000589758 UBAP1LF5GYI3 381 aa22.14■■□□□ 1.13
MBD1-220ENST00000589758 IQGAP1P46940 1657 aa22.13■■□□□ 1.13
MBD1-220ENST00000589758 ILDR2Q71H61 639 aa22.11■■□□□ 1.13
MBD1-220ENST00000589758 ANKRD50Q9ULJ7 1429 aa22.1■■□□□ 1.13
MBD1-220ENST00000589758 SLIT1O75093 1534 aa22.09■■□□□ 1.13
MBD1-220ENST00000589758 SCAF11Q99590 1463 aaKnown RBP22.09■■□□□ 1.13
MBD1-220ENST00000589758 DISP3Q9P2K9 1392 aa22.08■■□□□ 1.12
MBD1-220ENST00000589758 ARHGAP23Q9P227 1491 aa22.08■■□□□ 1.12
MBD1-220ENST00000589758 TXNDC2Q86VQ3 553 aa22.07■■□□□ 1.12
MBD1-220ENST00000589758 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
MBD1-220ENST00000589758 EID1Q9Y6B2 187 aa22.07■■□□□ 1.12
MBD1-220ENST00000589758 EFCAB6Q5THR3 1501 aa22.06■■□□□ 1.12
MBD1-220ENST00000589758 PIK3C2BO00750 1634 aa22.06■■□□□ 1.12
MBD1-220ENST00000589758 KDM5AP29375 1690 aaKnown RBP22.05■■□□□ 1.12
MBD1-220ENST00000589758 SOCS7O14512 581 aa22.05■■□□□ 1.12
MBD1-220ENST00000589758 TOM1O60784 492 aa22.05■■□□□ 1.12
MBD1-220ENST00000589758 IDI1Q13907 227 aa22.04■■□□□ 1.12
MBD1-220ENST00000589758 NOS1P29475 1434 aa22.04■■□□□ 1.12
MBD1-220ENST00000589758 RPRD2Q5VT52 1461 aaKnown RBP22.03■■□□□ 1.12
MBD1-220ENST00000589758 ROCK1Q13464 1354 aa22.03■■□□□ 1.12
MBD1-220ENST00000589758 LTKP29376 864 aa22.03■■□□□ 1.12
MBD1-220ENST00000589758 TMEM2Q9UHN6 1383 aa22.02■■□□□ 1.12
MBD1-220ENST00000589758 SYNMO15061 1565 aa22.01■■□□□ 1.11
MBD1-220ENST00000589758 SLC52A1Q9NWF4 448 aa22.01■■□□□ 1.11
MBD1-220ENST00000589758 TET3O43151 1660 aa21.98■■□□□ 1.11
MBD1-220ENST00000589758 UNC13BO14795 1591 aa21.98■■□□□ 1.11
MBD1-220ENST00000589758 STRCP1A6NGW2 1772 aa21.97■■□□□ 1.11
MBD1-220ENST00000589758 SCAF1Q9H7N4 1312 aaKnown RBP21.96■■□□□ 1.11
MBD1-220ENST00000589758 ADGRB3O60242 1522 aa21.96■■□□□ 1.11
MBD1-220ENST00000589758 LRRC7Q96NW7 1537 aa21.96■■□□□ 1.11
MBD1-220ENST00000589758 PIP4K2BP78356 416 aa21.95■■□□□ 1.1
MBD1-220ENST00000589758 PPARGC1BQ86YN6 1023 aaKnown RBP21.95■■□□□ 1.1
MBD1-220ENST00000589758 GCC2Q8IWJ2 1684 aa21.95■■□□□ 1.1
MBD1-220ENST00000589758 ITGAEP38570 1179 aa21.94■■□□□ 1.1
MBD1-220ENST00000589758 IQGAP3Q86VI3 1631 aa21.89■■□□□ 1.09
MBD1-220ENST00000589758 HDGFP51858 240 aaKnown RBP21.89■■□□□ 1.09
MBD1-220ENST00000589758 HSPA1LP34931 641 aa21.88■■□□□ 1.09
MBD1-220ENST00000589758 NUP155O75694 1391 aa21.87■■□□□ 1.09
MBD1-220ENST00000589758 ALKQ9UM73 1620 aa21.87■■□□□ 1.09
MBD1-220ENST00000589758 E9PCH4 1651 aa21.86■■□□□ 1.09
MBD1-220ENST00000589758 KCNA6P17658 529 aa21.85■■□□□ 1.09
MBD1-220ENST00000589758 TMEM131LA2VDJ0 1609 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms