RNA–Protein interactions for RNA: ENST00000589710.5

CIRBP-225, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-225ENST00000589710 MYT1LQ9UL68 1186 aa29.2■■■□□ 2.26
CIRBP-225ENST00000589710 ATP7AQ04656 1500 aa29.19■■■□□ 2.26
CIRBP-225ENST00000589710 RPRD2Q5VT52 1461 aaKnown RBP29.19■■■□□ 2.26
CIRBP-225ENST00000589710 FAM135AQ9P2D6 1515 aa29.18■■■□□ 2.26
CIRBP-225ENST00000589710 HECW2Q9P2P5 1572 aa29.18■■■□□ 2.26
CIRBP-225ENST00000589710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.17■■■□□ 2.26
CIRBP-225ENST00000589710 KIDINS220Q9ULH0 1771 aa29.16■■■□□ 2.26
CIRBP-225ENST00000589710 ZMYM4Q5VZL5 1548 aa29.14■■■□□ 2.26
CIRBP-225ENST00000589710 MLH3Q9UHC1 1453 aa29.13■■■□□ 2.25
CIRBP-225ENST00000589710 L3MBTL2Q969R5 705 aa29.09■■■□□ 2.25
CIRBP-225ENST00000589710 IQGAP3Q86VI3 1631 aa29.09■■■□□ 2.25
CIRBP-225ENST00000589710 ABCA6Q8N139 1617 aa29.07■■■□□ 2.24
CIRBP-225ENST00000589710 MAGI2Q86UL8 1455 aa29.07■■■□□ 2.24
CIRBP-225ENST00000589710 YEATS2Q9ULM3 1422 aa29.04■■■□□ 2.24
CIRBP-225ENST00000589710 DIP2CQ9Y2E4 1556 aa29.03■■■□□ 2.24
CIRBP-225ENST00000589710 DHX29Q7Z478 1369 aaKnown RBP28.97■■■□□ 2.23
CIRBP-225ENST00000589710 ARHGEF40Q8TER5 1519 aa28.97■■■□□ 2.23
CIRBP-225ENST00000589710 DEPDC5O75140 1603 aa28.96■■■□□ 2.23
CIRBP-225ENST00000589710 EIF2AK4Q9P2K8 1649 aaKnown RBP28.96■■■□□ 2.23
CIRBP-225ENST00000589710 A2MP01023 1474 aa28.95■■■□□ 2.22
CIRBP-225ENST00000589710 KIF3BO15066 747 aa28.94■■■□□ 2.22
CIRBP-225ENST00000589710 HIRIP3Q9BW71 556 aaPredicted RBP28.93■■■□□ 2.22
CIRBP-225ENST00000589710 CCDC144AA2RUR9 1427 aa28.9■■■□□ 2.22
CIRBP-225ENST00000589710 KANK1Q14678 1352 aa28.9■■■□□ 2.22
CIRBP-225ENST00000589710 ATP10AO60312 1499 aa28.87■■■□□ 2.21
CIRBP-225ENST00000589710 NBPF8Q3BBV2 869 aa28.87■■■□□ 2.21
CIRBP-225ENST00000589710 REREQ9P2R6 1566 aa28.85■■■□□ 2.21
CIRBP-225ENST00000589710 PRDM15P57071 1507 aaPredicted RBP28.85■■■□□ 2.21
CIRBP-225ENST00000589710 PLA2R1Q13018 1463 aa28.85■■■□□ 2.21
CIRBP-225ENST00000589710 ZNF326Q5BKZ1 582 aaKnown RBP28.84■■■□□ 2.21
CIRBP-225ENST00000589710 E9PCH4 1651 aa28.84■■■□□ 2.21
CIRBP-225ENST00000589710 MROH1Q8NDA8 1641 aa28.84■■■□□ 2.21
CIRBP-225ENST00000589710 SIGLEC1Q9BZZ2 1709 aa28.83■■■□□ 2.21
CIRBP-225ENST00000589710 TET3O43151 1660 aa28.83■■■□□ 2.21
CIRBP-225ENST00000589710 VWDEQ8N2E2 1590 aa28.82■■■□□ 2.2
CIRBP-225ENST00000589710 BCORL1Q5H9F3 1711 aa28.81■■■□□ 2.2
CIRBP-225ENST00000589710 MIER1Q8N108 512 aa28.8■■■□□ 2.2
CIRBP-225ENST00000589710 RNF17Q9BXT8 1623 aaKnown RBP28.78■■■□□ 2.2
CIRBP-225ENST00000589710 HSPA5P11021 654 aaKnown RBP28.77■■■□□ 2.2
CIRBP-225ENST00000589710 EIF4G2P78344 907 aaKnown RBP eCLIP28.76■■■□□ 2.19
CIRBP-225ENST00000589710 AGLP35573 1532 aa28.75■■■□□ 2.19
CIRBP-225ENST00000589710 KDM2AQ9Y2K7 1162 aa28.75■■■□□ 2.19
CIRBP-225ENST00000589710 SPHKAPQ2M3C7 1700 aa28.74■■■□□ 2.19
CIRBP-225ENST00000589710 DCAF11Q8TEB1 546 aa28.74■■■□□ 2.19
CIRBP-225ENST00000589710 CEP152O94986 1710 aa28.72■■■□□ 2.19
CIRBP-225ENST00000589710 RGL3Q3MIN7 710 aa28.72■■■□□ 2.19
CIRBP-225ENST00000589710 TRPM2O94759 1503 aa28.72■■■□□ 2.19
CIRBP-225ENST00000589710 UHRF1BP1Q6BDS2 1440 aa28.71■■■□□ 2.19
CIRBP-225ENST00000589710 GGT6Q6P531 493 aa28.71■■■□□ 2.19
CIRBP-225ENST00000589710 DDX10Q13206 875 aaKnown RBP28.7■■■□□ 2.18
CIRBP-225ENST00000589710 EFCAB6Q5THR3 1501 aa28.69■■■□□ 2.18
CIRBP-225ENST00000589710 PTPRTO14522 1441 aa28.67■■■□□ 2.18
CIRBP-225ENST00000589710 LMTK2Q8IWU2 1503 aa28.66■■■□□ 2.18
CIRBP-225ENST00000589710 RALGAPBQ86X10 1494 aa28.65■■■□□ 2.18
CIRBP-225ENST00000589710 CLTCL1P53675 1640 aa28.64■■■□□ 2.18
CIRBP-225ENST00000589710 ARID4BQ4LE39 1312 aaPredicted RBP28.59■■■□□ 2.17
CIRBP-225ENST00000589710 WASHC2CQ9Y4E1 1318 aa28.58■■■□□ 2.17
CIRBP-225ENST00000589710 ABCC3O15438 1527 aa28.58■■■□□ 2.17
CIRBP-225ENST00000589710 PRAG1Q86YV5 1406 aa28.58■■■□□ 2.17
CIRBP-225ENST00000589710 SPATA31E1Q6ZUB1 1445 aa28.57■■■□□ 2.16
CIRBP-225ENST00000589710 USP47Q96K76 1375 aa28.57■■■□□ 2.16
CIRBP-225ENST00000589710 ZC3H13Q5T200 1668 aaKnown RBP28.56■■■□□ 2.16
CIRBP-225ENST00000589710 MLECQ14165 292 aa28.55■■■□□ 2.16
CIRBP-225ENST00000589710 CARD11Q9BXL7 1154 aa28.55■■■□□ 2.16
CIRBP-225ENST00000589710 UGGT1Q9NYU2 1555 aa28.54■■■□□ 2.16
CIRBP-225ENST00000589710 CAMSAP1Q5T5Y3 1602 aa28.54■■■□□ 2.16
CIRBP-225ENST00000589710 TRPM1Q7Z4N2 1603 aa28.53■■■□□ 2.16
CIRBP-225ENST00000589710 WASHC2AQ641Q2 1341 aa28.53■■■□□ 2.16
CIRBP-225ENST00000589710 ROCK2O75116 1388 aaKnown RBP28.53■■■□□ 2.16
CIRBP-225ENST00000589710 NPATQ14207 1427 aa28.52■■■□□ 2.16
CIRBP-225ENST00000589710 CFAP65Q6ZU64 1925 aaKnown RBP28.49■■■□□ 2.15
CIRBP-225ENST00000589710 CLTCQ00610 1675 aaKnown RBP28.49■■■□□ 2.15
CIRBP-225ENST00000589710 KIF1BO60333 1816 aa28.47■■■□□ 2.15
CIRBP-225ENST00000589710 CCDC7Q96M83 1385 aa28.45■■■□□ 2.15
CIRBP-225ENST00000589710 C11orf95C9JLR9 678 aaPredicted RBP28.45■■■□□ 2.14
CIRBP-225ENST00000589710 PPP6R1Q9UPN7 881 aa28.45■■■□□ 2.14
CIRBP-225ENST00000589710 YTHDC1Q96MU7 727 aaKnown RBP28.44■■■□□ 2.14
CIRBP-225ENST00000589710 POLR1AO95602 1720 aaPredicted RBP28.44■■■□□ 2.14
CIRBP-225ENST00000589710 CNTLNQ9NXG0 1405 aa28.42■■■□□ 2.14
CIRBP-225ENST00000589710 FER1L4A9Z1Z3 1794 aa28.42■■■□□ 2.14
CIRBP-225ENST00000589710 MADDQ8WXG6 1647 aa28.42■■■□□ 2.14
CIRBP-225ENST00000589710 NEURL4Q96JN8 1562 aa28.41■■■□□ 2.14
CIRBP-225ENST00000589710 MROH2AA6NES4 1674 aa28.41■■■□□ 2.14
CIRBP-225ENST00000589710 NBPF1Q3BBV0 1214 aa28.41■■■□□ 2.14
CIRBP-225ENST00000589710 KIF7Q2M1P5 1343 aa28.39■■■□□ 2.14
CIRBP-225ENST00000589710 CHGAP10645 457 aaKnown RBP28.39■■■□□ 2.13
CIRBP-225ENST00000589710 ARHGAP31Q2M1Z3 1444 aa28.38■■■□□ 2.13
CIRBP-225ENST00000589710 ANP32CO43423 234 aa28.37■■■□□ 2.13
CIRBP-225ENST00000589710 LAMC1P11047 1609 aa28.37■■■□□ 2.13
CIRBP-225ENST00000589710 GPRASP1Q5JY77 1395 aa28.36■■■□□ 2.13
CIRBP-225ENST00000589710 ESF1Q9H501 851 aaKnown RBP28.36■■■□□ 2.13
CIRBP-225ENST00000589710 ADAMTSL3P82987 1691 aa28.36■■■□□ 2.13
CIRBP-225ENST00000589710 ADGRB3O60242 1522 aa28.35■■■□□ 2.13
CIRBP-225ENST00000589710 ST20-MTHFSA0A0A6YYL1 179 aa28.34■■■□□ 2.13
CIRBP-225ENST00000589710 STAC3Q96MF2 364 aa28.34■■■□□ 2.13
CIRBP-225ENST00000589710 NOS1P29475 1434 aa28.34■■■□□ 2.13
CIRBP-225ENST00000589710 POLR3GLQ9BT43 218 aa28.33■■■□□ 2.13
CIRBP-225ENST00000589710 SYNMO15061 1565 aa28.33■■■□□ 2.13
CIRBP-225ENST00000589710 PREX1Q8TCU6 1659 aa28.31■■■□□ 2.12
CIRBP-225ENST00000589710 ZMYM3Q14202 1370 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms