RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.39□□□□□ -0.75
VPS25-204ENST00000589577 ARHGAP35Q9NRY4 1499 aa10.38□□□□□ -0.75
VPS25-204ENST00000589577 CDK11AQ9UQ88 783 aaPredicted RBP10.38□□□□□ -0.75
VPS25-204ENST00000589577 TNRQ92752 1358 aa10.38□□□□□ -0.75
VPS25-204ENST00000589577 GGT6Q6P531 493 aa10.37□□□□□ -0.75
VPS25-204ENST00000589577 UGGT1Q9NYU2 1555 aa10.37□□□□□ -0.75
VPS25-204ENST00000589577 ATP1B4Q9UN42 357 aaPredicted RBP10.37□□□□□ -0.75
VPS25-204ENST00000589577 PZPP20742 1482 aa10.36□□□□□ -0.75
VPS25-204ENST00000589577 SPAG9O60271 1321 aaKnown RBP10.36□□□□□ -0.75
VPS25-204ENST00000589577 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
VPS25-204ENST00000589577 ROBO1Q9Y6N7 1651 aa10.35□□□□□ -0.75
VPS25-204ENST00000589577 ANKLE2Q86XL3 938 aa10.35□□□□□ -0.75
VPS25-204ENST00000589577 KDM5DQ9BY66 1539 aa10.34□□□□□ -0.75
VPS25-204ENST00000589577 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS25-204ENST00000589577 NLRP1Q9C000 1473 aa10.34□□□□□ -0.75
VPS25-204ENST00000589577 HNRNPMP52272 730 aaKnown RBP eCLIP10.33□□□□□ -0.76
VPS25-204ENST00000589577 FAM135AQ9P2D6 1515 aa10.33□□□□□ -0.76
VPS25-204ENST00000589577 GPATCH8Q9UKJ3 1502 aaKnown RBP10.33□□□□□ -0.76
VPS25-204ENST00000589577 FAM135BQ49AJ0 1406 aa10.33□□□□□ -0.76
VPS25-204ENST00000589577 KIAA1107Q9UPP5 1409 aa10.32□□□□□ -0.76
VPS25-204ENST00000589577 EEA1Q15075 1411 aa10.31□□□□□ -0.76
VPS25-204ENST00000589577 MIA2Q96PC5 1412 aa10.31□□□□□ -0.76
VPS25-204ENST00000589577 UBR1Q8IWV7 1749 aa10.3□□□□□ -0.76
VPS25-204ENST00000589577 THEMISQ8N1K5 641 aaPredicted RBP10.3□□□□□ -0.76
VPS25-204ENST00000589577 ZNF777Q9ULD5 760 aaPredicted RBP10.3□□□□□ -0.76
VPS25-204ENST00000589577 CCDC18Q5T9S5 1454 aa10.3□□□□□ -0.76
VPS25-204ENST00000589577 MAP3K1Q13233 1512 aa10.29□□□□□ -0.76
VPS25-204ENST00000589577 PHLPP1O60346 1717 aa10.29□□□□□ -0.76
VPS25-204ENST00000589577 LRP6O75581 1613 aa10.29□□□□□ -0.76
VPS25-204ENST00000589577 PLEKHH2Q8IVE3 1493 aa10.28□□□□□ -0.76
VPS25-204ENST00000589577 COL16A1Q07092 1604 aaPredicted RBP10.27□□□□□ -0.77
VPS25-204ENST00000589577 DHX29Q7Z478 1369 aaKnown RBP10.26□□□□□ -0.77
VPS25-204ENST00000589577 CASKIN1Q8WXD9 1431 aa10.25□□□□□ -0.77
VPS25-204ENST00000589577 SCAF11Q99590 1463 aaKnown RBP10.25□□□□□ -0.77
VPS25-204ENST00000589577 MBD5Q9P267 1494 aa10.25□□□□□ -0.77
VPS25-204ENST00000589577 NCOA2Q15596 1464 aa10.24□□□□□ -0.77
VPS25-204ENST00000589577 ARHGAP23Q9P227 1491 aa10.24□□□□□ -0.77
VPS25-204ENST00000589577 RTEL1-TNFRSF6BF6WH68 1400 aa10.24□□□□□ -0.77
VPS25-204ENST00000589577 SLIT1O75093 1534 aa10.23□□□□□ -0.77
VPS25-204ENST00000589577 TRIM52Q96A61 297 aa10.23□□□□□ -0.77
VPS25-204ENST00000589577 TMEM94Q12767 1356 aa10.23□□□□□ -0.77
VPS25-204ENST00000589577 ERVK-7P63135 1459 aa10.23□□□□□ -0.77
VPS25-204ENST00000589577 TIAM1Q13009 1591 aa10.22□□□□□ -0.77
VPS25-204ENST00000589577 CFAP65Q6ZU64 1925 aaKnown RBP10.22□□□□□ -0.77
VPS25-204ENST00000589577 JCADQ9P266 1359 aa10.22□□□□□ -0.77
VPS25-204ENST00000589577 LRRC9Q6ZRR7 1453 aa10.22□□□□□ -0.77
VPS25-204ENST00000589577 ABCC3O15438 1527 aa10.22□□□□□ -0.77
VPS25-204ENST00000589577 EP400Q96L91 3159 aa10.21□□□□□ -0.77
VPS25-204ENST00000589577 KIF3BO15066 747 aa10.21□□□□□ -0.77
VPS25-204ENST00000589577 LTKP29376 864 aa10.21□□□□□ -0.77
VPS25-204ENST00000589577 ZNF644Q9H582 1327 aaPredicted RBP10.21□□□□□ -0.78
VPS25-204ENST00000589577 WASHC2CQ9Y4E1 1318 aa10.21□□□□□ -0.78
VPS25-204ENST00000589577 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
VPS25-204ENST00000589577 CDK12Q9NYV4 1490 aaPredicted RBP10.21□□□□□ -0.78
VPS25-204ENST00000589577 SHPRHQ149N8 1683 aa10.21□□□□□ -0.78
VPS25-204ENST00000589577 CEP152O94986 1710 aa10.2□□□□□ -0.78
VPS25-204ENST00000589577 MROH1Q8NDA8 1641 aa10.2□□□□□ -0.78
VPS25-204ENST00000589577 CFDP1Q9UEE9 299 aaPredicted RBP10.2□□□□□ -0.78
VPS25-204ENST00000589577 NWD1Q149M9 1564 aa10.19□□□□□ -0.78
VPS25-204ENST00000589577 SETBP1Q9Y6X0 1596 aa10.18□□□□□ -0.78
VPS25-204ENST00000589577 PRDM15P57071 1507 aaPredicted RBP10.18□□□□□ -0.78
VPS25-204ENST00000589577 CAMSAP2Q08AD1 1489 aa10.18□□□□□ -0.78
VPS25-204ENST00000589577 RBM33Q96EV2 1170 aaKnown RBP10.18□□□□□ -0.78
VPS25-204ENST00000589577 CCNB3Q8WWL7 1395 aa10.17□□□□□ -0.78
VPS25-204ENST00000589577 EHMT2Q96KQ7 1210 aa10.17□□□□□ -0.78
VPS25-204ENST00000589577 TET3O43151 1660 aa10.17□□□□□ -0.78
VPS25-204ENST00000589577 KDM5AP29375 1690 aaKnown RBP10.17□□□□□ -0.78
VPS25-204ENST00000589577 PIK3C2BO00750 1634 aa10.17□□□□□ -0.78
VPS25-204ENST00000589577 RGS12O14924 1447 aa10.16□□□□□ -0.78
VPS25-204ENST00000589577 ZNF772Q68DY9 489 aaPredicted RBP10.16□□□□□ -0.78
VPS25-204ENST00000589577 DIP2AQ14689 1571 aa10.16□□□□□ -0.78
VPS25-204ENST00000589577 NKTRP30414 1462 aaKnown RBP10.16□□□□□ -0.78
VPS25-204ENST00000589577 CCDC141Q6ZP82 1450 aa10.16□□□□□ -0.78
VPS25-204ENST00000589577 FGD6Q6ZV73 1430 aa10.16□□□□□ -0.78
VPS25-204ENST00000589577 AHDC1Q5TGY3 1603 aaPredicted RBP10.15□□□□□ -0.78
VPS25-204ENST00000589577 SPATA31A6Q5VVP1 1343 aa10.15□□□□□ -0.78
VPS25-204ENST00000589577 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.78
VPS25-204ENST00000589577 RXRBP28702 533 aa10.14□□□□□ -0.79
VPS25-204ENST00000589577 TXNDC2Q86VQ3 553 aa10.14□□□□□ -0.79
VPS25-204ENST00000589577 EIF2AK4Q9P2K8 1649 aaKnown RBP10.14□□□□□ -0.79
VPS25-204ENST00000589577 SLAIN2Q9P270 581 aa10.13□□□□□ -0.79
VPS25-204ENST00000589577 KCNA6P17658 529 aa10.12□□□□□ -0.79
VPS25-204ENST00000589577 TMEM2Q9UHN6 1383 aa10.12□□□□□ -0.79
VPS25-204ENST00000589577 CHD2O14647 1828 aaKnown RBP10.12□□□□□ -0.79
VPS25-204ENST00000589577 MEX3CQ5U5Q3 659 aaKnown RBP10.11□□□□□ -0.79
VPS25-204ENST00000589577 PROSER2Q86WR7 435 aaPredicted RBP10.11□□□□□ -0.79
VPS25-204ENST00000589577 MSH6P52701 1360 aa10.11□□□□□ -0.79
VPS25-204ENST00000589577 ARHGEF5Q12774 1597 aa10.1□□□□□ -0.79
VPS25-204ENST00000589577 MAST1Q9Y2H9 1570 aa10.1□□□□□ -0.79
VPS25-204ENST00000589577 EFCAB6Q5THR3 1501 aa10.09□□□□□ -0.79
VPS25-204ENST00000589577 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.09□□□□□ -0.79
VPS25-204ENST00000589577 EHBP1L1Q8N3D4 1523 aa10.08□□□□□ -0.8
VPS25-204ENST00000589577 SLC26A8Q96RN1 970 aa10.08□□□□□ -0.8
VPS25-204ENST00000589577 AFF2P51816 1311 aa10.07□□□□□ -0.8
VPS25-204ENST00000589577 ARHGAP31Q2M1Z3 1444 aa10.07□□□□□ -0.8
VPS25-204ENST00000589577 MTUS2Q5JR59 1369 aa10.07□□□□□ -0.8
VPS25-204ENST00000589577 EID1Q9Y6B2 187 aa10.07□□□□□ -0.8
VPS25-204ENST00000589577 LRP5O75197 1615 aa10.06□□□□□ -0.8
VPS25-204ENST00000589577 CEP162Q5TB80 1403 aa10.06□□□□□ -0.8
VPS25-204ENST00000589577 NHSL1Q5SYE7 1610 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms