RNA–Protein interactions for RNA: ENST00000589541.5

MBD1-218, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-218ENST00000589541 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
MBD1-218ENST00000589541 FBXO31Q5XUX0 539 aaPredicted RBP18.69■□□□□ 0.58
MBD1-218ENST00000589541 WASHC2CQ9Y4E1 1318 aa18.69■□□□□ 0.58
MBD1-218ENST00000589541 TCOF1Q13428 1488 aaKnown RBP18.68■□□□□ 0.58
MBD1-218ENST00000589541 KDM5DQ9BY66 1539 aa18.68■□□□□ 0.58
MBD1-218ENST00000589541 ZNF335Q9H4Z2 1342 aaPredicted RBP18.68■□□□□ 0.58
MBD1-218ENST00000589541 A2ML1A8K2U0 1454 aa18.67■□□□□ 0.58
MBD1-218ENST00000589541 TNRQ92752 1358 aa18.67■□□□□ 0.58
MBD1-218ENST00000589541 PZPP20742 1482 aa18.65■□□□□ 0.58
MBD1-218ENST00000589541 MAP3K1Q13233 1512 aa18.64■□□□□ 0.58
MBD1-218ENST00000589541 FAM135AQ9P2D6 1515 aa18.64■□□□□ 0.58
MBD1-218ENST00000589541 IQSEC2Q5JU85 1478 aa18.64■□□□□ 0.57
MBD1-218ENST00000589541 DNMT1P26358 1616 aaKnown RBP18.63■□□□□ 0.57
MBD1-218ENST00000589541 MYOM3Q5VTT5 1437 aa18.63■□□□□ 0.57
MBD1-218ENST00000589541 MIA2Q96PC5 1412 aa18.61■□□□□ 0.57
MBD1-218ENST00000589541 MAST1Q9Y2H9 1570 aa18.59■□□□□ 0.57
MBD1-218ENST00000589541 DISP3Q9P2K9 1392 aa18.57■□□□□ 0.56
MBD1-218ENST00000589541 UBAP1LF5GYI3 381 aa18.57■□□□□ 0.56
MBD1-218ENST00000589541 RNF17Q9BXT8 1623 aaKnown RBP18.56■□□□□ 0.56
MBD1-218ENST00000589541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.56■□□□□ 0.56
MBD1-218ENST00000589541 ABCC3O15438 1527 aa18.56■□□□□ 0.56
MBD1-218ENST00000589541 APLP2Q06481 763 aa18.56■□□□□ 0.56
MBD1-218ENST00000589541 THEMISQ8N1K5 641 aaPredicted RBP18.56■□□□□ 0.56
MBD1-218ENST00000589541 NLRP1Q9C000 1473 aa18.56■□□□□ 0.56
MBD1-218ENST00000589541 ANKLE2Q86XL3 938 aa18.54■□□□□ 0.56
MBD1-218ENST00000589541 NEURL4Q96JN8 1562 aa18.54■□□□□ 0.56
MBD1-218ENST00000589541 EIF2AK4Q9P2K8 1649 aaKnown RBP18.53■□□□□ 0.56
MBD1-218ENST00000589541 UGGT1Q9NYU2 1555 aa18.53■□□□□ 0.56
MBD1-218ENST00000589541 POLR1AO95602 1720 aaPredicted RBP18.52■□□□□ 0.56
MBD1-218ENST00000589541 ZC3H13Q5T200 1668 aaKnown RBP18.51■□□□□ 0.55
MBD1-218ENST00000589541 DUOX2Q9NRD8 1548 aa18.51■□□□□ 0.55
MBD1-218ENST00000589541 MROH1Q8NDA8 1641 aa18.51■□□□□ 0.55
MBD1-218ENST00000589541 KIF15Q9NS87 1388 aa18.51■□□□□ 0.55
MBD1-218ENST00000589541 ABCC5O15440 1437 aa18.5■□□□□ 0.55
MBD1-218ENST00000589541 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
MBD1-218ENST00000589541 ERVK-7P63135 1459 aa18.49■□□□□ 0.55
MBD1-218ENST00000589541 SHANK2Q9UPX8 1470 aa18.49■□□□□ 0.55
MBD1-218ENST00000589541 SPATA31D1Q6ZQQ2 1576 aa18.49■□□□□ 0.55
MBD1-218ENST00000589541 PTPN23Q9H3S7 1636 aa18.49■□□□□ 0.55
MBD1-218ENST00000589541 NPHP4O75161 1426 aaPredicted RBP18.48■□□□□ 0.55
MBD1-218ENST00000589541 ILDR2Q71H61 639 aa18.47■□□□□ 0.55
MBD1-218ENST00000589541 CPS1P31327 1500 aa18.46■□□□□ 0.55
MBD1-218ENST00000589541 DAPK1P53355 1430 aa18.46■□□□□ 0.55
MBD1-218ENST00000589541 FGD6Q6ZV73 1430 aa18.46■□□□□ 0.55
MBD1-218ENST00000589541 CEP152O94986 1710 aa18.46■□□□□ 0.55
MBD1-218ENST00000589541 MED14O60244 1454 aa18.46■□□□□ 0.54
MBD1-218ENST00000589541 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
MBD1-218ENST00000589541 CROCC2H7BZ55 1655 aa18.45■□□□□ 0.54
MBD1-218ENST00000589541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.45■□□□□ 0.54
MBD1-218ENST00000589541 ERBINQ96RT1 1412 aa18.45■□□□□ 0.54
MBD1-218ENST00000589541 VWDEQ8N2E2 1590 aa18.44■□□□□ 0.54
MBD1-218ENST00000589541 SCAF1Q9H7N4 1312 aaKnown RBP18.44■□□□□ 0.54
MBD1-218ENST00000589541 PIP4K2BP78356 416 aa18.43■□□□□ 0.54
MBD1-218ENST00000589541 CHIC2Q9UKJ5 165 aa18.43■□□□□ 0.54
MBD1-218ENST00000589541 PRDM15P57071 1507 aaPredicted RBP18.43■□□□□ 0.54
MBD1-218ENST00000589541 IQGAP1P46940 1657 aa18.41■□□□□ 0.54
MBD1-218ENST00000589541 TOM1O60784 492 aa18.41■□□□□ 0.54
MBD1-218ENST00000589541 ANKRD30AQ9BXX3 1397 aa18.4■□□□□ 0.54
MBD1-218ENST00000589541 ARHGAP31Q2M1Z3 1444 aa18.4■□□□□ 0.54
MBD1-218ENST00000589541 KANK1Q14678 1352 aa18.39■□□□□ 0.53
MBD1-218ENST00000589541 CFAP65Q6ZU64 1925 aaKnown RBP18.39■□□□□ 0.53
MBD1-218ENST00000589541 UBR1Q8IWV7 1749 aa18.38■□□□□ 0.53
MBD1-218ENST00000589541 HSPA1LP34931 641 aa18.37■□□□□ 0.53
MBD1-218ENST00000589541 SCAF11Q99590 1463 aaKnown RBP18.37■□□□□ 0.53
MBD1-218ENST00000589541 LTKP29376 864 aa18.36■□□□□ 0.53
MBD1-218ENST00000589541 TXNDC2Q86VQ3 553 aa18.36■□□□□ 0.53
MBD1-218ENST00000589541 FAM50AQ14320 339 aaKnown RBP18.35■□□□□ 0.53
MBD1-218ENST00000589541 SOCS7O14512 581 aa18.34■□□□□ 0.53
MBD1-218ENST00000589541 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.52
MBD1-218ENST00000589541 SLIT1O75093 1534 aa18.33■□□□□ 0.52
MBD1-218ENST00000589541 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
MBD1-218ENST00000589541 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.52
MBD1-218ENST00000589541 EID1Q9Y6B2 187 aa18.32■□□□□ 0.52
MBD1-218ENST00000589541 STRCP1A6NGW2 1772 aa18.32■□□□□ 0.52
MBD1-218ENST00000589541 LMTK2Q8IWU2 1503 aa18.31■□□□□ 0.52
MBD1-218ENST00000589541 PIK3C2BO00750 1634 aa18.31■□□□□ 0.52
MBD1-218ENST00000589541 ALKQ9UM73 1620 aa18.3■□□□□ 0.52
MBD1-218ENST00000589541 TMEM2Q9UHN6 1383 aa18.3■□□□□ 0.52
MBD1-218ENST00000589541 ADGRL2O95490 1459 aa18.29■□□□□ 0.52
MBD1-218ENST00000589541 IDI1Q13907 227 aa18.29■□□□□ 0.52
MBD1-218ENST00000589541 SYNMO15061 1565 aa18.28■□□□□ 0.52
MBD1-218ENST00000589541 SENP3Q9H4L4 574 aaPredicted RBP18.27■□□□□ 0.52
MBD1-218ENST00000589541 EFCAB6Q5THR3 1501 aa18.27■□□□□ 0.51
MBD1-218ENST00000589541 ANKRD50Q9ULJ7 1429 aa18.26■□□□□ 0.51
MBD1-218ENST00000589541 NOS1P29475 1434 aa18.24■□□□□ 0.51
MBD1-218ENST00000589541 MED1Q15648 1581 aaPredicted RBP18.23■□□□□ 0.51
MBD1-218ENST00000589541 KDM5AP29375 1690 aaKnown RBP18.22■□□□□ 0.51
MBD1-218ENST00000589541 SLC26A8Q96RN1 970 aa18.21■□□□□ 0.51
MBD1-218ENST00000589541 SLC52A1Q9NWF4 448 aa18.21■□□□□ 0.51
MBD1-218ENST00000589541 ADGRB3O60242 1522 aa18.2■□□□□ 0.5
MBD1-218ENST00000589541 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
MBD1-218ENST00000589541 BCANQ96GW7 911 aa18.18■□□□□ 0.5
MBD1-218ENST00000589541 KCNA6P17658 529 aa18.17■□□□□ 0.5
MBD1-218ENST00000589541 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
MBD1-218ENST00000589541 TET3O43151 1660 aa18.16■□□□□ 0.5
MBD1-218ENST00000589541 XIRP1Q702N8 1843 aaKnown RBP18.15■□□□□ 0.5
MBD1-218ENST00000589541 RBM33Q96EV2 1170 aaKnown RBP18.15■□□□□ 0.5
MBD1-218ENST00000589541 ITGAEP38570 1179 aa18.14■□□□□ 0.49
MBD1-218ENST00000589541 PROSER2Q86WR7 435 aaPredicted RBP18.14■□□□□ 0.49
MBD1-218ENST00000589541 PPARGC1BQ86YN6 1023 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms