RNA–Protein interactions for RNA: ENST00000589347.1

CLPTM1-211, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 3

Gene CLPTM1, Length 638 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-211ENST00000589347 CLTCQ00610 1675 aaKnown RBP16.64■□□□□ 0.25
CLPTM1-211ENST00000589347 MAST1Q9Y2H9 1570 aa16.63■□□□□ 0.25
CLPTM1-211ENST00000589347 MIA2Q96PC5 1412 aa16.62■□□□□ 0.25
CLPTM1-211ENST00000589347 PKD2Q13563 968 aa16.62■□□□□ 0.25
CLPTM1-211ENST00000589347 RSPH4AQ5TD94 716 aa16.62■□□□□ 0.25
CLPTM1-211ENST00000589347 ZNF644Q9H582 1327 aaPredicted RBP16.62■□□□□ 0.25
CLPTM1-211ENST00000589347 NCKAP5LQ9HCH0 1330 aa16.62■□□□□ 0.25
CLPTM1-211ENST00000589347 PTPN23Q9H3S7 1636 aa16.61■□□□□ 0.25
CLPTM1-211ENST00000589347 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
CLPTM1-211ENST00000589347 FAM135AQ9P2D6 1515 aa16.59■□□□□ 0.25
CLPTM1-211ENST00000589347 HSPA1LP34931 641 aa16.58■□□□□ 0.24
CLPTM1-211ENST00000589347 PTPRKQ15262 1439 aa16.58■□□□□ 0.24
CLPTM1-211ENST00000589347 EIF2AK4Q9P2K8 1649 aaKnown RBP16.58■□□□□ 0.24
CLPTM1-211ENST00000589347 CPS1P31327 1500 aa16.57■□□□□ 0.24
CLPTM1-211ENST00000589347 KANK4Q5T7N3 995 aaPredicted RBP16.56■□□□□ 0.24
CLPTM1-211ENST00000589347 ZC3H13Q5T200 1668 aaKnown RBP16.55■□□□□ 0.24
CLPTM1-211ENST00000589347 DNMT1P26358 1616 aaKnown RBP16.55■□□□□ 0.24
CLPTM1-211ENST00000589347 ALKQ9UM73 1620 aa16.55■□□□□ 0.24
CLPTM1-211ENST00000589347 NEURL4Q96JN8 1562 aa16.55■□□□□ 0.24
CLPTM1-211ENST00000589347 TSPY4P0CV99 314 aa16.54■□□□□ 0.24
CLPTM1-211ENST00000589347 TSPY10P0CW01 314 aa16.54■□□□□ 0.24
CLPTM1-211ENST00000589347 PPP6R1Q9UPN7 881 aa16.54■□□□□ 0.24
CLPTM1-211ENST00000589347 SHANK2Q9UPX8 1470 aa16.54■□□□□ 0.24
CLPTM1-211ENST00000589347 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
CLPTM1-211ENST00000589347 DHX29Q7Z478 1369 aaKnown RBP16.53■□□□□ 0.24
CLPTM1-211ENST00000589347 RNF17Q9BXT8 1623 aaKnown RBP16.53■□□□□ 0.24
CLPTM1-211ENST00000589347 KDM5DQ9BY66 1539 aa16.53■□□□□ 0.24
CLPTM1-211ENST00000589347 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.23
CLPTM1-211ENST00000589347 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
CLPTM1-211ENST00000589347 TOM1O60784 492 aa16.49■□□□□ 0.23
CLPTM1-211ENST00000589347 GGT6Q6P531 493 aa16.49■□□□□ 0.23
CLPTM1-211ENST00000589347 DUOX2Q9NRD8 1548 aa16.49■□□□□ 0.23
CLPTM1-211ENST00000589347 VWDEQ8N2E2 1590 aa16.48■□□□□ 0.23
CLPTM1-211ENST00000589347 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
CLPTM1-211ENST00000589347 PIP4K2BP78356 416 aa16.47■□□□□ 0.23
CLPTM1-211ENST00000589347 CEP152O94986 1710 aa16.47■□□□□ 0.23
CLPTM1-211ENST00000589347 DAPK1P53355 1430 aa16.45■□□□□ 0.22
CLPTM1-211ENST00000589347 KIF3BO15066 747 aa16.44■□□□□ 0.22
CLPTM1-211ENST00000589347 PHF23Q9BUL5 403 aaPredicted RBP16.44■□□□□ 0.22
CLPTM1-211ENST00000589347 ABCC5O15440 1437 aa16.42■□□□□ 0.22
CLPTM1-211ENST00000589347 ERBINQ96RT1 1412 aa16.42■□□□□ 0.22
CLPTM1-211ENST00000589347 PZPP20742 1482 aa16.42■□□□□ 0.22
CLPTM1-211ENST00000589347 DEPDC5O75140 1603 aa16.41■□□□□ 0.22
CLPTM1-211ENST00000589347 MROH1Q8NDA8 1641 aa16.41■□□□□ 0.22
CLPTM1-211ENST00000589347 PRDM15P57071 1507 aaPredicted RBP16.41■□□□□ 0.22
CLPTM1-211ENST00000589347 MED14O60244 1454 aa16.41■□□□□ 0.22
CLPTM1-211ENST00000589347 CFAP65Q6ZU64 1925 aaKnown RBP16.41■□□□□ 0.22
CLPTM1-211ENST00000589347 KIF15Q9NS87 1388 aa16.4■□□□□ 0.22
CLPTM1-211ENST00000589347 ABCC3O15438 1527 aa16.4■□□□□ 0.22
CLPTM1-211ENST00000589347 SYNMO15061 1565 aa16.38■□□□□ 0.21
CLPTM1-211ENST00000589347 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
CLPTM1-211ENST00000589347 ANKRD30AQ9BXX3 1397 aa16.38■□□□□ 0.21
CLPTM1-211ENST00000589347 ADGRL2O95490 1459 aa16.36■□□□□ 0.21
CLPTM1-211ENST00000589347 TNRQ92752 1358 aa16.36■□□□□ 0.21
CLPTM1-211ENST00000589347 STRCP1A6NGW2 1772 aa16.36■□□□□ 0.21
CLPTM1-211ENST00000589347 RGS17Q9UGC6 210 aaPredicted RBP16.35■□□□□ 0.21
CLPTM1-211ENST00000589347 IQGAP1P46940 1657 aa16.34■□□□□ 0.21
CLPTM1-211ENST00000589347 NPHP4O75161 1426 aaPredicted RBP16.34■□□□□ 0.21
CLPTM1-211ENST00000589347 NLRP1Q9C000 1473 aa16.34■□□□□ 0.21
CLPTM1-211ENST00000589347 LRRC7Q96NW7 1537 aa16.34■□□□□ 0.21
CLPTM1-211ENST00000589347 FAM50AQ14320 339 aaKnown RBP16.33■□□□□ 0.2
CLPTM1-211ENST00000589347 KANK1Q14678 1352 aa16.32■□□□□ 0.2
CLPTM1-211ENST00000589347 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.32■□□□□ 0.2
CLPTM1-211ENST00000589347 UGGT1Q9NYU2 1555 aa16.32■□□□□ 0.2
CLPTM1-211ENST00000589347 ANKLE2Q86XL3 938 aa16.3■□□□□ 0.2
CLPTM1-211ENST00000589347 RRP7BPQ9NSQ0 103 aa16.3■□□□□ 0.2
CLPTM1-211ENST00000589347 ERVK-7P63135 1459 aa16.29■□□□□ 0.2
CLPTM1-211ENST00000589347 FBXO31Q5XUX0 539 aaPredicted RBP16.28■□□□□ 0.2
CLPTM1-211ENST00000589347 GCC2Q8IWJ2 1684 aa16.27■□□□□ 0.2
CLPTM1-211ENST00000589347 CHIC2Q9UKJ5 165 aa16.27■□□□□ 0.2
CLPTM1-211ENST00000589347 LMTK2Q8IWU2 1503 aa16.27■□□□□ 0.2
CLPTM1-211ENST00000589347 UBR1Q8IWV7 1749 aa16.27■□□□□ 0.19
CLPTM1-211ENST00000589347 UNC13BO14795 1591 aa16.26■□□□□ 0.19
CLPTM1-211ENST00000589347 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
CLPTM1-211ENST00000589347 ARHGAP31Q2M1Z3 1444 aa16.26■□□□□ 0.19
CLPTM1-211ENST00000589347 EFCAB6Q5THR3 1501 aa16.25■□□□□ 0.19
CLPTM1-211ENST00000589347 TET3O43151 1660 aa16.25■□□□□ 0.19
CLPTM1-211ENST00000589347 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
CLPTM1-211ENST00000589347 KDM5AP29375 1690 aaKnown RBP16.24■□□□□ 0.19
CLPTM1-211ENST00000589347 XIRP1Q702N8 1843 aaKnown RBP16.23■□□□□ 0.19
CLPTM1-211ENST00000589347 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
CLPTM1-211ENST00000589347 ROCK1Q13464 1354 aa16.22■□□□□ 0.19
CLPTM1-211ENST00000589347 PIK3C2BO00750 1634 aa16.2■□□□□ 0.18
CLPTM1-211ENST00000589347 POTEAQ6S8J7 498 aa16.2■□□□□ 0.18
CLPTM1-211ENST00000589347 IQGAP3Q86VI3 1631 aa16.19■□□□□ 0.18
CLPTM1-211ENST00000589347 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
CLPTM1-211ENST00000589347 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
CLPTM1-211ENST00000589347 FAM135BQ49AJ0 1406 aa16.19■□□□□ 0.18
CLPTM1-211ENST00000589347 RPRD2Q5VT52 1461 aaKnown RBP16.18■□□□□ 0.18
CLPTM1-211ENST00000589347 RRBP1Q9P2E9 1410 aaKnown RBP16.18■□□□□ 0.18
CLPTM1-211ENST00000589347 SCAF11Q99590 1463 aaKnown RBP16.16■□□□□ 0.18
CLPTM1-211ENST00000589347 MYO5BQ9ULV0 1848 aa16.15■□□□□ 0.18
CLPTM1-211ENST00000589347 SRCAPQ6ZRS2 3230 aa16.15■□□□□ 0.18
CLPTM1-211ENST00000589347 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
CLPTM1-211ENST00000589347 ARHGAP23Q9P227 1491 aa16.15■□□□□ 0.18
CLPTM1-211ENST00000589347 E9PCH4 1651 aa16.14■□□□□ 0.18
CLPTM1-211ENST00000589347 ADGRB3O60242 1522 aa16.14■□□□□ 0.18
CLPTM1-211ENST00000589347 SLIT1O75093 1534 aa16.14■□□□□ 0.18
CLPTM1-211ENST00000589347 ITGAEP38570 1179 aa16.12■□□□□ 0.17
CLPTM1-211ENST00000589347 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms