RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 TEX14Q8IWB6 1497 aa9.51□□□□□ -0.89
LINC01539-202ENST00000589293 GLI2P10070 1586 aa9.5□□□□□ -0.89
LINC01539-202ENST00000589293 IER5LQ5T953 404 aa9.49□□□□□ -0.89
LINC01539-202ENST00000589293 VSIG10Q8N0Z9 540 aa9.48□□□□□ -0.89
LINC01539-202ENST00000589293 DISP1Q96F81 1524 aa9.47□□□□□ -0.89
LINC01539-202ENST00000589293 GOLGA3Q08378 1498 aa9.47□□□□□ -0.89
LINC01539-202ENST00000589293 EPRSP07814 1512 aaKnown RBP9.46□□□□□ -0.89
LINC01539-202ENST00000589293 UGGT2Q9NYU1 1516 aa9.46□□□□□ -0.89
LINC01539-202ENST00000589293 KDM5BQ9UGL1 1544 aa9.46□□□□□ -0.89
LINC01539-202ENST00000589293 KCNH8Q96L42 1107 aa9.46□□□□□ -0.9
LINC01539-202ENST00000589293 ADGRL1O94910 1474 aa9.45□□□□□ -0.9
LINC01539-202ENST00000589293 KIAA0556O60303 1618 aa9.45□□□□□ -0.9
LINC01539-202ENST00000589293 WDR7Q9Y4E6 1490 aa9.44□□□□□ -0.9
LINC01539-202ENST00000589293 ZCCHC11Q5TAX3 1644 aaKnown RBP9.44□□□□□ -0.9
LINC01539-202ENST00000589293 OCEL1Q9H607 264 aa9.43□□□□□ -0.9
LINC01539-202ENST00000589293 METRNQ9UJH8 293 aa9.43□□□□□ -0.9
LINC01539-202ENST00000589293 MAP3K4Q9Y6R4 1608 aa9.42□□□□□ -0.9
LINC01539-202ENST00000589293 SLC39A7Q92504 469 aa9.42□□□□□ -0.9
LINC01539-202ENST00000589293 PPRC1Q5VV67 1664 aaKnown RBP9.42□□□□□ -0.9
LINC01539-202ENST00000589293 CD109Q6YHK3 1445 aa9.41□□□□□ -0.9
LINC01539-202ENST00000589293 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
LINC01539-202ENST00000589293 CTTNBP2Q8WZ74 1663 aa9.4□□□□□ -0.9
LINC01539-202ENST00000589293 MICALL2Q8IY33 904 aa9.4□□□□□ -0.9
LINC01539-202ENST00000589293 TMEM121BQ9BXQ6 578 aaPredicted RBP9.4□□□□□ -0.9
LINC01539-202ENST00000589293 C7P10643 843 aa9.39□□□□□ -0.91
LINC01539-202ENST00000589293 PLCG2P16885 1265 aa9.39□□□□□ -0.91
LINC01539-202ENST00000589293 ARID3CA6NKF2 412 aa9.38□□□□□ -0.91
LINC01539-202ENST00000589293 COL17A1Q9UMD9 1497 aaPredicted RBP9.38□□□□□ -0.91
LINC01539-202ENST00000589293 CFAP43Q8NDM7 1665 aa9.38□□□□□ -0.91
LINC01539-202ENST00000589293 MAGI3Q5TCQ9 1506 aa9.37□□□□□ -0.91
LINC01539-202ENST00000589293 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
LINC01539-202ENST00000589293 CRISPLD2Q9H0B8 497 aa9.36□□□□□ -0.91
LINC01539-202ENST00000589293 POTEB2H3BUK9 544 aa9.35□□□□□ -0.91
LINC01539-202ENST00000589293 ABCA8O94911 1581 aa9.35□□□□□ -0.91
LINC01539-202ENST00000589293 SEC24BO95487 1268 aa9.35□□□□□ -0.91
LINC01539-202ENST00000589293 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
LINC01539-202ENST00000589293 POTEJP0CG39 1038 aa9.34□□□□□ -0.91
LINC01539-202ENST00000589293 TMEM92Q6UXU6 159 aa9.34□□□□□ -0.91
LINC01539-202ENST00000589293 PHLDB1Q86UU1 1377 aa9.34□□□□□ -0.91
LINC01539-202ENST00000589293 ARID4BQ4LE39 1312 aaPredicted RBP9.33□□□□□ -0.92
LINC01539-202ENST00000589293 HECW2Q9P2P5 1572 aa9.33□□□□□ -0.92
LINC01539-202ENST00000589293 RANGAP1P46060 587 aaPredicted RBP9.33□□□□□ -0.92
LINC01539-202ENST00000589293 PRXQ9BXM0 1461 aa9.33□□□□□ -0.92
LINC01539-202ENST00000589293 MFSD10Q14728 455 aa9.3□□□□□ -0.92
LINC01539-202ENST00000589293 ATP10BO94823 1461 aa9.29□□□□□ -0.92
LINC01539-202ENST00000589293 PLEKHD1A6NEE1 506 aa9.29□□□□□ -0.92
LINC01539-202ENST00000589293 KIF3CO14782 793 aa9.29□□□□□ -0.92
LINC01539-202ENST00000589293 ARAP3Q8WWN8 1544 aa9.29□□□□□ -0.92
LINC01539-202ENST00000589293 KIF21BO75037 1637 aa9.28□□□□□ -0.92
LINC01539-202ENST00000589293 RAPGEF3O95398 923 aa9.28□□□□□ -0.92
LINC01539-202ENST00000589293 NEO1Q92859 1461 aa9.28□□□□□ -0.92
LINC01539-202ENST00000589293 KCNV2Q8TDN2 545 aa9.27□□□□□ -0.93
LINC01539-202ENST00000589293 L3MBTL3Q96JM7 780 aaPredicted RBP9.27□□□□□ -0.93
LINC01539-202ENST00000589293 LARP6Q9BRS8 491 aaKnown RBP9.27□□□□□ -0.93
LINC01539-202ENST00000589293 GPHNQ9NQX3 736 aaPredicted RBP9.27□□□□□ -0.93
LINC01539-202ENST00000589293 RAPGEF6Q8TEU7 1601 aa9.27□□□□□ -0.93
LINC01539-202ENST00000589293 EEA1Q15075 1411 aa9.26□□□□□ -0.93
LINC01539-202ENST00000589293 ABCA9Q8IUA7 1624 aa9.26□□□□□ -0.93
LINC01539-202ENST00000589293 C2orf72A6NCS6 295 aa9.25□□□□□ -0.93
LINC01539-202ENST00000589293 PDE4AP27815 886 aa9.25□□□□□ -0.93
LINC01539-202ENST00000589293 DSG2Q14126 1118 aa9.24□□□□□ -0.93
LINC01539-202ENST00000589293 ATP1B4Q9UN42 357 aaPredicted RBP9.24□□□□□ -0.93
LINC01539-202ENST00000589293 SAMD9Q5K651 1589 aa9.24□□□□□ -0.93
LINC01539-202ENST00000589293 POGZQ7Z3K3 1410 aa9.23□□□□□ -0.93
LINC01539-202ENST00000589293 PTPRMP28827 1452 aa9.23□□□□□ -0.93
LINC01539-202ENST00000589293 FBXO41Q8TF61 875 aa9.23□□□□□ -0.93
LINC01539-202ENST00000589293 DDX27Q96GQ7 796 aaKnown RBP9.23□□□□□ -0.93
LINC01539-202ENST00000589293 FHOD3Q2V2M9 1422 aa9.22□□□□□ -0.93
LINC01539-202ENST00000589293 DENND4BO75064 1496 aaPredicted RBP9.22□□□□□ -0.93
LINC01539-202ENST00000589293 CFAP74Q9C0B2 1584 aa9.22□□□□□ -0.93
LINC01539-202ENST00000589293 UBTFP17480 764 aaKnown RBP9.21□□□□□ -0.94
LINC01539-202ENST00000589293 CAMK2BQ13554 666 aa9.21□□□□□ -0.94
LINC01539-202ENST00000589293 PPP1R15BQ5SWA1 713 aa9.21□□□□□ -0.94
LINC01539-202ENST00000589293 CDK11AQ9UQ88 783 aaPredicted RBP9.21□□□□□ -0.94
LINC01539-202ENST00000589293 AKNAQ7Z591 1439 aa9.21□□□□□ -0.94
LINC01539-202ENST00000589293 NUP153P49790 1475 aaKnown RBP9.21□□□□□ -0.94
LINC01539-202ENST00000589293 FOXK1P85037 733 aa9.2□□□□□ -0.94
LINC01539-202ENST00000589293 MYT1LQ9UL68 1186 aa9.2□□□□□ -0.94
LINC01539-202ENST00000589293 FANCAO15360 1455 aa9.2□□□□□ -0.94
LINC01539-202ENST00000589293 G3V3G9 751 aa9.19□□□□□ -0.94
LINC01539-202ENST00000589293 WDR70Q9NW82 654 aa9.19□□□□□ -0.94
LINC01539-202ENST00000589293 EFCAB5A4FU69 1503 aa9.19□□□□□ -0.94
LINC01539-202ENST00000589293 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
LINC01539-202ENST00000589293 MLECQ14165 292 aa9.18□□□□□ -0.94
LINC01539-202ENST00000589293 E2F4Q16254 413 aa9.18□□□□□ -0.94
LINC01539-202ENST00000589293 BCORL1Q5H9F3 1711 aa9.18□□□□□ -0.94
LINC01539-202ENST00000589293 TMC2Q8TDI7 906 aa9.18□□□□□ -0.94
LINC01539-202ENST00000589293 EMILIN3Q9NT22 766 aa9.18□□□□□ -0.94
LINC01539-202ENST00000589293 MADDQ8WXG6 1647 aa9.17□□□□□ -0.94
LINC01539-202ENST00000589293 PCF11O94913 1555 aaKnown RBP9.17□□□□□ -0.94
LINC01539-202ENST00000589293 ARHGEF40Q8TER5 1519 aa9.17□□□□□ -0.94
LINC01539-202ENST00000589293 EFCAB2Q5VUJ9 269 aa9.16□□□□□ -0.94
LINC01539-202ENST00000589293 C3orf67Q6ZVT6 689 aa9.16□□□□□ -0.94
LINC01539-202ENST00000589293 PLPP6Q8IY26 295 aa9.16□□□□□ -0.94
LINC01539-202ENST00000589293 ZFYVE16Q7Z3T8 1539 aa9.15□□□□□ -0.94
LINC01539-202ENST00000589293 MAGI2Q86UL8 1455 aa9.15□□□□□ -0.94
LINC01539-202ENST00000589293 ESF1Q9H501 851 aaKnown RBP9.15□□□□□ -0.94
LINC01539-202ENST00000589293 RIMS1Q86UR5 1692 aaKnown RBP9.15□□□□□ -0.94
LINC01539-202ENST00000589293 FRMPD1Q5SYB0 1578 aa9.15□□□□□ -0.95
LINC01539-202ENST00000589293 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms