RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 MAGI2Q86UL8 1455 aa17.51■□□□□ 0.39
CCBE1-203ENST00000589116 SIN3AQ96ST3 1273 aa17.5■□□□□ 0.39
CCBE1-203ENST00000589116 NUP155O75694 1391 aa17.5■□□□□ 0.39
CCBE1-203ENST00000589116 KIDINS220Q9ULH0 1771 aa17.5■□□□□ 0.39
CCBE1-203ENST00000589116 EIF2AK4Q9P2K8 1649 aaKnown RBP17.49■□□□□ 0.39
CCBE1-203ENST00000589116 MLH3Q9UHC1 1453 aa17.48■□□□□ 0.39
CCBE1-203ENST00000589116 IQGAP3Q86VI3 1631 aa17.48■□□□□ 0.39
CCBE1-203ENST00000589116 ANKRD30BQ9BXX2 1392 aa17.48■□□□□ 0.39
CCBE1-203ENST00000589116 FAM135AQ9P2D6 1515 aa17.47■□□□□ 0.39
CCBE1-203ENST00000589116 ARID4BQ4LE39 1312 aaPredicted RBP17.46■□□□□ 0.39
CCBE1-203ENST00000589116 NEUROD1Q13562 356 aa17.46■□□□□ 0.39
CCBE1-203ENST00000589116 TONSLQ96HA7 1378 aa17.46■□□□□ 0.38
CCBE1-203ENST00000589116 RICTORQ6R327 1708 aa17.45■□□□□ 0.38
CCBE1-203ENST00000589116 DEPDC5O75140 1603 aa17.45■□□□□ 0.38
CCBE1-203ENST00000589116 MADDQ8WXG6 1647 aa17.45■□□□□ 0.38
CCBE1-203ENST00000589116 HSPA2P54652 639 aa17.45■□□□□ 0.38
CCBE1-203ENST00000589116 BCORL1Q5H9F3 1711 aa17.44■□□□□ 0.38
CCBE1-203ENST00000589116 RPRD2Q5VT52 1461 aaKnown RBP17.43■□□□□ 0.38
CCBE1-203ENST00000589116 DHX29Q7Z478 1369 aaKnown RBP17.43■□□□□ 0.38
CCBE1-203ENST00000589116 PKD2Q13563 968 aa17.42■□□□□ 0.38
CCBE1-203ENST00000589116 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
CCBE1-203ENST00000589116 FOXD1Q16676 465 aa17.39■□□□□ 0.37
CCBE1-203ENST00000589116 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
CCBE1-203ENST00000589116 ZMYM4Q5VZL5 1548 aa17.39■□□□□ 0.37
CCBE1-203ENST00000589116 ABCA6Q8N139 1617 aa17.39■□□□□ 0.37
CCBE1-203ENST00000589116 A2MP01023 1474 aa17.39■□□□□ 0.37
CCBE1-203ENST00000589116 FRMPD1Q5SYB0 1578 aa17.39■□□□□ 0.37
CCBE1-203ENST00000589116 PRDM15P57071 1507 aaPredicted RBP17.39■□□□□ 0.37
CCBE1-203ENST00000589116 PLPPR3Q6T4P5 718 aa17.39■□□□□ 0.37
CCBE1-203ENST00000589116 RIMS1Q86UR5 1692 aaKnown RBP17.38■□□□□ 0.37
CCBE1-203ENST00000589116 VWDEQ8N2E2 1590 aa17.37■□□□□ 0.37
CCBE1-203ENST00000589116 RNF17Q9BXT8 1623 aaKnown RBP17.37■□□□□ 0.37
CCBE1-203ENST00000589116 PPP1R15AO75807 674 aaPredicted RBP17.36■□□□□ 0.37
CCBE1-203ENST00000589116 DIP2CQ9Y2E4 1556 aa17.36■□□□□ 0.37
CCBE1-203ENST00000589116 ZNF316A6NFI3 1004 aaPredicted RBP17.36■□□□□ 0.37
CCBE1-203ENST00000589116 RAPGEF3O95398 923 aa17.36■□□□□ 0.37
CCBE1-203ENST00000589116 MROH1Q8NDA8 1641 aa17.35■□□□□ 0.37
CCBE1-203ENST00000589116 TET3O43151 1660 aa17.34■□□□□ 0.37
CCBE1-203ENST00000589116 KANK1Q14678 1352 aa17.34■□□□□ 0.37
CCBE1-203ENST00000589116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.33■□□□□ 0.37
CCBE1-203ENST00000589116 ATP10AO60312 1499 aa17.32■□□□□ 0.36
CCBE1-203ENST00000589116 KIF3BO15066 747 aa17.31■□□□□ 0.36
CCBE1-203ENST00000589116 LMTK2Q8IWU2 1503 aa17.3■□□□□ 0.36
CCBE1-203ENST00000589116 E9PCH4 1651 aa17.3■□□□□ 0.36
CCBE1-203ENST00000589116 REREQ9P2R6 1566 aa17.28■□□□□ 0.36
CCBE1-203ENST00000589116 CCDC144AA2RUR9 1427 aa17.27■□□□□ 0.36
CCBE1-203ENST00000589116 YEATS2Q9ULM3 1422 aa17.27■□□□□ 0.35
CCBE1-203ENST00000589116 L3MBTL2Q969R5 705 aa17.26■□□□□ 0.35
CCBE1-203ENST00000589116 PLA2R1Q13018 1463 aa17.26■□□□□ 0.35
CCBE1-203ENST00000589116 SPHKAPQ2M3C7 1700 aa17.26■□□□□ 0.35
CCBE1-203ENST00000589116 EFCAB6Q5THR3 1501 aa17.25■□□□□ 0.35
CCBE1-203ENST00000589116 ARHGEF40Q8TER5 1519 aa17.25■□□□□ 0.35
CCBE1-203ENST00000589116 TRPM2O94759 1503 aa17.24■□□□□ 0.35
CCBE1-203ENST00000589116 CEP152O94986 1710 aa17.24■□□□□ 0.35
CCBE1-203ENST00000589116 PTPRTO14522 1441 aa17.23■□□□□ 0.35
CCBE1-203ENST00000589116 ZC3H13Q5T200 1668 aaKnown RBP17.23■□□□□ 0.35
CCBE1-203ENST00000589116 AGLP35573 1532 aa17.21■□□□□ 0.35
CCBE1-203ENST00000589116 DMRT2Q9Y5R5 561 aa17.2■□□□□ 0.34
CCBE1-203ENST00000589116 ABCC3O15438 1527 aa17.2■□□□□ 0.34
CCBE1-203ENST00000589116 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
CCBE1-203ENST00000589116 CAMSAP1Q5T5Y3 1602 aa17.17■□□□□ 0.34
CCBE1-203ENST00000589116 NEURL4Q96JN8 1562 aa17.17■□□□□ 0.34
CCBE1-203ENST00000589116 MLECQ14165 292 aa17.16■□□□□ 0.34
CCBE1-203ENST00000589116 CLTCL1P53675 1640 aa17.15■□□□□ 0.34
CCBE1-203ENST00000589116 FER1L4A9Z1Z3 1794 aa17.15■□□□□ 0.34
CCBE1-203ENST00000589116 GGT6Q6P531 493 aa17.15■□□□□ 0.34
CCBE1-203ENST00000589116 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.34
CCBE1-203ENST00000589116 DIEXFQ68CQ4 756 aaKnown RBP17.14■□□□□ 0.33
CCBE1-203ENST00000589116 NPATQ14207 1427 aa17.13■□□□□ 0.33
CCBE1-203ENST00000589116 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
CCBE1-203ENST00000589116 SPATA31E1Q6ZUB1 1445 aa17.13■□□□□ 0.33
CCBE1-203ENST00000589116 WASHC2CQ9Y4E1 1318 aa17.13■□□□□ 0.33
CCBE1-203ENST00000589116 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
CCBE1-203ENST00000589116 CNTLNQ9NXG0 1405 aa17.11■□□□□ 0.33
CCBE1-203ENST00000589116 RALGAPBQ86X10 1494 aa17.11■□□□□ 0.33
CCBE1-203ENST00000589116 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
CCBE1-203ENST00000589116 KIF1BO60333 1816 aa17.1■□□□□ 0.33
CCBE1-203ENST00000589116 STRCQ7RTU9 1775 aa17.09■□□□□ 0.33
CCBE1-203ENST00000589116 SIGLEC1Q9BZZ2 1709 aa17.08■□□□□ 0.32
CCBE1-203ENST00000589116 DCAF11Q8TEB1 546 aa17.07■□□□□ 0.32
CCBE1-203ENST00000589116 NOS1P29475 1434 aa17.07■□□□□ 0.32
CCBE1-203ENST00000589116 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
CCBE1-203ENST00000589116 STAC3Q96MF2 364 aa17.07■□□□□ 0.32
CCBE1-203ENST00000589116 EIF4G2P78344 907 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCBE1-203ENST00000589116 TRPM1Q7Z4N2 1603 aa17.05■□□□□ 0.32
CCBE1-203ENST00000589116 PIK3C2BO00750 1634 aa17.05■□□□□ 0.32
CCBE1-203ENST00000589116 CEBPAP49715 358 aaPredicted RBP17.04■□□□□ 0.32
CCBE1-203ENST00000589116 IQSEC2Q5JU85 1478 aa17.04■□□□□ 0.32
CCBE1-203ENST00000589116 UGGT1Q9NYU2 1555 aa17.04■□□□□ 0.32
CCBE1-203ENST00000589116 ADGRB3O60242 1522 aa17.04■□□□□ 0.32
CCBE1-203ENST00000589116 RGL3Q3MIN7 710 aa17.04■□□□□ 0.32
CCBE1-203ENST00000589116 LAMC1P11047 1609 aa17.02■□□□□ 0.32
CCBE1-203ENST00000589116 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.32
CCBE1-203ENST00000589116 ZNF326Q5BKZ1 582 aaKnown RBP17.02■□□□□ 0.32
CCBE1-203ENST00000589116 KDM2AQ9Y2K7 1162 aa17.02■□□□□ 0.32
CCBE1-203ENST00000589116 SYNMO15061 1565 aa17.02■□□□□ 0.32
CCBE1-203ENST00000589116 IFT172Q9UG01 1749 aa17.01■□□□□ 0.31
CCBE1-203ENST00000589116 HSPA5P11021 654 aaKnown RBP17.01■□□□□ 0.31
CCBE1-203ENST00000589116 MROH2AA6NES4 1674 aa17.01■□□□□ 0.31
CCBE1-203ENST00000589116 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms