RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 CEP170BQ9Y4F5 1589 aaPredicted RBP23.02■■□□□ 1.28
DNMT1-217ENST00000589091 PTPRTO14522 1441 aa23.02■■□□□ 1.28
DNMT1-217ENST00000589091 CAMSAP1Q5T5Y3 1602 aa23.02■■□□□ 1.28
DNMT1-217ENST00000589091 RNF17Q9BXT8 1623 aaKnown RBP23.02■■□□□ 1.28
DNMT1-217ENST00000589091 ZC3H13Q5T200 1668 aaKnown RBP23.02■■□□□ 1.28
DNMT1-217ENST00000589091 NCOA1Q15788 1441 aa23■■□□□ 1.27
DNMT1-217ENST00000589091 KIF3BO15066 747 aa23■■□□□ 1.27
DNMT1-217ENST00000589091 PTPN23Q9H3S7 1636 aa23■■□□□ 1.27
DNMT1-217ENST00000589091 CERKQ8TCT0 537 aa22.96■■□□□ 1.27
DNMT1-217ENST00000589091 PLA2R1Q13018 1463 aa22.96■■□□□ 1.27
DNMT1-217ENST00000589091 PZPP20742 1482 aa22.95■■□□□ 1.26
DNMT1-217ENST00000589091 POLR1AO95602 1720 aaPredicted RBP22.94■■□□□ 1.26
DNMT1-217ENST00000589091 DNMT1P26358 1616 aaKnown RBP22.93■■□□□ 1.26
DNMT1-217ENST00000589091 SHANK2Q9UPX8 1470 aa22.93■■□□□ 1.26
DNMT1-217ENST00000589091 DUOX2Q9NRD8 1548 aa22.92■■□□□ 1.26
DNMT1-217ENST00000589091 A2ML1A8K2U0 1454 aa22.92■■□□□ 1.26
DNMT1-217ENST00000589091 CEP152O94986 1710 aa22.92■■□□□ 1.26
DNMT1-217ENST00000589091 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
DNMT1-217ENST00000589091 WASHC2CQ9Y4E1 1318 aa22.91■■□□□ 1.26
DNMT1-217ENST00000589091 TCOF1Q13428 1488 aaKnown RBP22.89■■□□□ 1.25
DNMT1-217ENST00000589091 MROH1Q8NDA8 1641 aa22.88■■□□□ 1.25
DNMT1-217ENST00000589091 FGD6Q6ZV73 1430 aa22.88■■□□□ 1.25
DNMT1-217ENST00000589091 TNRQ92752 1358 aa22.88■■□□□ 1.25
DNMT1-217ENST00000589091 ABCC3O15438 1527 aa22.87■■□□□ 1.25
DNMT1-217ENST00000589091 PKD2Q13563 968 aa22.86■■□□□ 1.25
DNMT1-217ENST00000589091 LTBP4Q8N2S1 1624 aa22.86■■□□□ 1.25
DNMT1-217ENST00000589091 ABCC5O15440 1437 aa22.84■■□□□ 1.25
DNMT1-217ENST00000589091 DAPK1P53355 1430 aa22.84■■□□□ 1.25
DNMT1-217ENST00000589091 DEPDC5O75140 1603 aa22.83■■□□□ 1.25
DNMT1-217ENST00000589091 IQSEC2Q5JU85 1478 aa22.83■■□□□ 1.25
DNMT1-217ENST00000589091 NLRP1Q9C000 1473 aa22.83■■□□□ 1.25
DNMT1-217ENST00000589091 ERBINQ96RT1 1412 aa22.82■■□□□ 1.24
DNMT1-217ENST00000589091 PRDM15P57071 1507 aaPredicted RBP22.82■■□□□ 1.24
DNMT1-217ENST00000589091 SPATA31D1Q6ZQQ2 1576 aa22.82■■□□□ 1.24
DNMT1-217ENST00000589091 KIF15Q9NS87 1388 aa22.81■■□□□ 1.24
DNMT1-217ENST00000589091 NCKAP5LQ9HCH0 1330 aa22.81■■□□□ 1.24
DNMT1-217ENST00000589091 FBXO31Q5XUX0 539 aaPredicted RBP22.8■■□□□ 1.24
DNMT1-217ENST00000589091 UGGT1Q9NYU2 1555 aa22.79■■□□□ 1.24
DNMT1-217ENST00000589091 NEURL4Q96JN8 1562 aa22.76■■□□□ 1.23
DNMT1-217ENST00000589091 ERVK-7P63135 1459 aa22.75■■□□□ 1.23
DNMT1-217ENST00000589091 ANKRD30AQ9BXX3 1397 aa22.75■■□□□ 1.23
DNMT1-217ENST00000589091 UBR1Q8IWV7 1749 aa22.73■■□□□ 1.23
DNMT1-217ENST00000589091 THEMISQ8N1K5 641 aaPredicted RBP22.72■■□□□ 1.23
DNMT1-217ENST00000589091 RRP7BPQ9NSQ0 103 aa22.72■■□□□ 1.23
DNMT1-217ENST00000589091 ADGRL2O95490 1459 aa22.72■■□□□ 1.23
DNMT1-217ENST00000589091 ARHGAP31Q2M1Z3 1444 aa22.71■■□□□ 1.23
DNMT1-217ENST00000589091 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
DNMT1-217ENST00000589091 KANK1Q14678 1352 aa22.69■■□□□ 1.22
DNMT1-217ENST00000589091 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.68■■□□□ 1.22
DNMT1-217ENST00000589091 ZNF335Q9H4Z2 1342 aaPredicted RBP22.68■■□□□ 1.22
DNMT1-217ENST00000589091 VWDEQ8N2E2 1590 aa22.67■■□□□ 1.22
DNMT1-217ENST00000589091 ANKLE2Q86XL3 938 aa22.67■■□□□ 1.22
DNMT1-217ENST00000589091 MED14O60244 1454 aa22.66■■□□□ 1.22
DNMT1-217ENST00000589091 KDM5AP29375 1690 aaKnown RBP22.66■■□□□ 1.22
DNMT1-217ENST00000589091 LMTK2Q8IWU2 1503 aa22.66■■□□□ 1.22
DNMT1-217ENST00000589091 CHIC2Q9UKJ5 165 aa22.65■■□□□ 1.22
DNMT1-217ENST00000589091 CPS1P31327 1500 aa22.64■■□□□ 1.21
DNMT1-217ENST00000589091 FAM50AQ14320 339 aaKnown RBP22.63■■□□□ 1.21
DNMT1-217ENST00000589091 NPHP4O75161 1426 aaPredicted RBP22.62■■□□□ 1.21
DNMT1-217ENST00000589091 PIK3C2BO00750 1634 aa22.61■■□□□ 1.21
DNMT1-217ENST00000589091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.61■■□□□ 1.213e-8■□□□□ 8.7
DNMT1-217ENST00000589091 EFCAB6Q5THR3 1501 aa22.6■■□□□ 1.21
DNMT1-217ENST00000589091 GCC2Q8IWJ2 1684 aa22.59■■□□□ 1.21
DNMT1-217ENST00000589091 TET3O43151 1660 aa22.58■■□□□ 1.2
DNMT1-217ENST00000589091 SLIT1O75093 1534 aa22.57■■□□□ 1.2
DNMT1-217ENST00000589091 ANKRD50Q9ULJ7 1429 aa22.57■■□□□ 1.2
DNMT1-217ENST00000589091 UNC13BO14795 1591 aa22.55■■□□□ 1.2
DNMT1-217ENST00000589091 ARHGAP23Q9P227 1491 aa22.55■■□□□ 1.2
DNMT1-217ENST00000589091 STRCP1A6NGW2 1772 aa22.55■■□□□ 1.2
DNMT1-217ENST00000589091 SCAF11Q99590 1463 aaKnown RBP22.54■■□□□ 1.2
DNMT1-217ENST00000589091 SYNMO15061 1565 aa22.54■■□□□ 1.2
DNMT1-217ENST00000589091 SENP3Q9H4L4 574 aaPredicted RBP22.53■■□□□ 1.2
DNMT1-217ENST00000589091 RPRD2Q5VT52 1461 aaKnown RBP22.53■■□□□ 1.2
DNMT1-217ENST00000589091 MYO5BQ9ULV0 1848 aa22.52■■□□□ 1.2
DNMT1-217ENST00000589091 UBAP1LF5GYI3 381 aa22.5■■□□□ 1.19
DNMT1-217ENST00000589091 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
DNMT1-217ENST00000589091 NOS1P29475 1434 aa22.49■■□□□ 1.19
DNMT1-217ENST00000589091 ADGRB3O60242 1522 aa22.48■■□□□ 1.19
DNMT1-217ENST00000589091 IQGAP3Q86VI3 1631 aa22.47■■□□□ 1.19
DNMT1-217ENST00000589091 PHF23Q9BUL5 403 aaPredicted RBP22.47■■□□□ 1.19
DNMT1-217ENST00000589091 STAG3Q9UJ98 1225 aa22.47■■□□□ 1.19
DNMT1-217ENST00000589091 EID1Q9Y6B2 187 aa22.46■■□□□ 1.19
DNMT1-217ENST00000589091 E9PCH4 1651 aa22.46■■□□□ 1.19
DNMT1-217ENST00000589091 TXNDC2Q86VQ3 553 aa22.44■■□□□ 1.18
DNMT1-217ENST00000589091 TMEM2Q9UHN6 1383 aa22.44■■□□□ 1.18
DNMT1-217ENST00000589091 XIRP1Q702N8 1843 aaKnown RBP22.43■■□□□ 1.18
DNMT1-217ENST00000589091 TOM1O60784 492 aa22.42■■□□□ 1.18
DNMT1-217ENST00000589091 IDI1Q13907 227 aa22.42■■□□□ 1.18
DNMT1-217ENST00000589091 SLC52A1Q9NWF4 448 aa22.42■■□□□ 1.18
DNMT1-217ENST00000589091 LTKP29376 864 aa22.41■■□□□ 1.18
DNMT1-217ENST00000589091 LRRC7Q96NW7 1537 aa22.4■■□□□ 1.18
DNMT1-217ENST00000589091 TMEM131LA2VDJ0 1609 aa22.38■■□□□ 1.17
DNMT1-217ENST00000589091 DISP3Q9P2K9 1392 aa22.35■■□□□ 1.17
DNMT1-217ENST00000589091 SPHKAPQ2M3C7 1700 aa22.34■■□□□ 1.17
DNMT1-217ENST00000589091 PPARGC1BQ86YN6 1023 aaKnown RBP22.34■■□□□ 1.17
DNMT1-217ENST00000589091 ALKQ9UM73 1620 aa22.34■■□□□ 1.17
DNMT1-217ENST00000589091 RRBP1Q9P2E9 1410 aaKnown RBP22.33■■□□□ 1.17
DNMT1-217ENST00000589091 ITGAEP38570 1179 aa22.33■■□□□ 1.17
DNMT1-217ENST00000589091 SCAF1Q9H7N4 1312 aaKnown RBP22.32■■□□□ 1.16
DNMT1-217ENST00000589091 CHD2O14647 1828 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms