RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 PPARGC1BQ86YN6 1023 aaKnown RBP32.08■■■□□ 2.73
MBD3-205ENST00000589064 FBXO31Q5XUX0 539 aaPredicted RBP32.05■■■□□ 2.72
MBD3-205ENST00000589064 KIF15Q9NS87 1388 aa32.05■■■□□ 2.72
MBD3-205ENST00000589064 SHANK2Q9UPX8 1470 aa32.03■■■□□ 2.72
MBD3-205ENST00000589064 ILDR1Q86SU0 546 aaPredicted RBP32.02■■■□□ 2.72
MBD3-205ENST00000589064 DMRT2Q9Y5R5 561 aa31.99■■■□□ 2.71
MBD3-205ENST00000589064 KDM5DQ9BY66 1539 aa31.99■■■□□ 2.71
MBD3-205ENST00000589064 DUOX2Q9NRD8 1548 aa31.99■■■□□ 2.71
MBD3-205ENST00000589064 DNMT1P26358 1616 aaKnown RBP31.97■■■□□ 2.71
MBD3-205ENST00000589064 ANKRD30AQ9BXX3 1397 aa31.97■■■□□ 2.71
MBD3-205ENST00000589064 FAM135AQ9P2D6 1515 aa31.94■■■□□ 2.7
MBD3-205ENST00000589064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.92■■■□□ 2.72e-7■□□□□ 9.9
MBD3-205ENST00000589064 PZPP20742 1482 aa31.91■■■□□ 2.7
MBD3-205ENST00000589064 NCOA1Q15788 1441 aa31.91■■■□□ 2.7
MBD3-205ENST00000589064 TNRQ92752 1358 aa31.91■■■□□ 2.7
MBD3-205ENST00000589064 CROCC2H7BZ55 1655 aa31.9■■■□□ 2.7
MBD3-205ENST00000589064 ERBINQ96RT1 1412 aa31.9■■■□□ 2.7
MBD3-205ENST00000589064 RNF17Q9BXT8 1623 aaKnown RBP31.89■■■□□ 2.7
MBD3-205ENST00000589064 EIF2AK4Q9P2K8 1649 aaKnown RBP31.88■■■□□ 2.69
MBD3-205ENST00000589064 NCKAP5LQ9HCH0 1330 aa31.87■■■□□ 2.69
MBD3-205ENST00000589064 STRCQ7RTU9 1775 aa31.87■■■□□ 2.69
MBD3-205ENST00000589064 ABCC3O15438 1527 aa31.86■■■□□ 2.69
MBD3-205ENST00000589064 CAMSAP1Q5T5Y3 1602 aa31.84■■■□□ 2.69
MBD3-205ENST00000589064 MROH1Q8NDA8 1641 aa31.83■■■□□ 2.69
MBD3-205ENST00000589064 MYO3AQ8NEV4 1616 aa31.82■■■□□ 2.68
MBD3-205ENST00000589064 PTPRTO14522 1441 aa31.82■■■□□ 2.68
MBD3-205ENST00000589064 A2ML1A8K2U0 1454 aa31.82■■■□□ 2.68
MBD3-205ENST00000589064 CEP170BQ9Y4F5 1589 aaPredicted RBP31.81■■■□□ 2.68
MBD3-205ENST00000589064 ADGRL2O95490 1459 aa31.81■■■□□ 2.68
MBD3-205ENST00000589064 CERKQ8TCT0 537 aa31.79■■■□□ 2.68
MBD3-205ENST00000589064 FBXO41Q8TF61 875 aa31.79■■■□□ 2.68
MBD3-205ENST00000589064 ITGAEP38570 1179 aa31.78■■■□□ 2.68
MBD3-205ENST00000589064 PKD2Q13563 968 aa31.78■■■□□ 2.68
MBD3-205ENST00000589064 KANK1Q14678 1352 aa31.77■■■□□ 2.68
MBD3-205ENST00000589064 ZNF142P52746 1687 aaPredicted RBP31.73■■■□□ 2.67
MBD3-205ENST00000589064 PLA2R1Q13018 1463 aa31.73■■■□□ 2.67
MBD3-205ENST00000589064 THEMISQ8N1K5 641 aaPredicted RBP31.73■■■□□ 2.67
MBD3-205ENST00000589064 ANKRD50Q9ULJ7 1429 aa31.73■■■□□ 2.67
MBD3-205ENST00000589064 ZC3H13Q5T200 1668 aaKnown RBP31.72■■■□□ 2.67
MBD3-205ENST00000589064 PRDM15P57071 1507 aaPredicted RBP31.72■■■□□ 2.67
MBD3-205ENST00000589064 ERVK-7P63135 1459 aa31.71■■■□□ 2.67
MBD3-205ENST00000589064 NLRP1Q9C000 1473 aa31.7■■■□□ 2.67
MBD3-205ENST00000589064 ARHGAP31Q2M1Z3 1444 aa31.69■■■□□ 2.66
MBD3-205ENST00000589064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.68■■■□□ 2.663e-7■□□□□ 9.3
MBD3-205ENST00000589064 SPATA31D1Q6ZQQ2 1576 aa31.67■■■□□ 2.66
MBD3-205ENST00000589064 CEP152O94986 1710 aa31.67■■■□□ 2.66
MBD3-205ENST00000589064 ANKLE2Q86XL3 938 aa31.65■■■□□ 2.66
MBD3-205ENST00000589064 ROCK1Q13464 1354 aa31.65■■■□□ 2.66
MBD3-205ENST00000589064 DEPDC5O75140 1603 aa31.65■■■□□ 2.66
MBD3-205ENST00000589064 UGGT1Q9NYU2 1555 aa31.62■■■□□ 2.65
MBD3-205ENST00000589064 VWDEQ8N2E2 1590 aa31.59■■■□□ 2.65
MBD3-205ENST00000589064 LMTK2Q8IWU2 1503 aa31.59■■■□□ 2.65
MBD3-205ENST00000589064 ZNF335Q9H4Z2 1342 aaPredicted RBP31.58■■■□□ 2.65
MBD3-205ENST00000589064 RRBP1Q9P2E9 1410 aaKnown RBP31.56■■■□□ 2.64
MBD3-205ENST00000589064 CFAP65Q6ZU64 1925 aaKnown RBP31.53■■■□□ 2.64
MBD3-205ENST00000589064 IDI1Q13907 227 aa31.53■■■□□ 2.64
MBD3-205ENST00000589064 LTBP4Q8N2S1 1624 aa31.52■■■□□ 2.64
MBD3-205ENST00000589064 STAG3Q9UJ98 1225 aa31.51■■■□□ 2.63
MBD3-205ENST00000589064 NPHP4O75161 1426 aaPredicted RBP31.46■■■□□ 2.63
MBD3-205ENST00000589064 NOS1P29475 1434 aa31.46■■■□□ 2.63
MBD3-205ENST00000589064 EFCAB6Q5THR3 1501 aa31.46■■■□□ 2.63
MBD3-205ENST00000589064 TXNDC2Q86VQ3 553 aa31.46■■■□□ 2.63
MBD3-205ENST00000589064 NEURL4Q96JN8 1562 aa31.45■■■□□ 2.63
MBD3-205ENST00000589064 NUP155O75694 1391 aa31.45■■■□□ 2.63
MBD3-205ENST00000589064 LTKP29376 864 aa31.45■■■□□ 2.62
MBD3-205ENST00000589064 SLC52A1Q9NWF4 448 aa31.43■■■□□ 2.62
MBD3-205ENST00000589064 MED14O60244 1454 aa31.43■■■□□ 2.62
MBD3-205ENST00000589064 EID1Q9Y6B2 187 aa31.4■■■□□ 2.62
MBD3-205ENST00000589064 UNC13BO14795 1591 aa31.39■■■□□ 2.62
MBD3-205ENST00000589064 RPRD2Q5VT52 1461 aaKnown RBP31.39■■■□□ 2.62
MBD3-205ENST00000589064 UBR1Q8IWV7 1749 aa31.38■■■□□ 2.61
MBD3-205ENST00000589064 POLR1AO95602 1720 aaPredicted RBP31.37■■■□□ 2.61
MBD3-205ENST00000589064 SYNMO15061 1565 aa31.37■■■□□ 2.61
MBD3-205ENST00000589064 TMEM2Q9UHN6 1383 aa31.36■■■□□ 2.61
MBD3-205ENST00000589064 ARHGAP23Q9P227 1491 aa31.36■■■□□ 2.61
MBD3-205ENST00000589064 PIK3C2BO00750 1634 aa31.35■■■□□ 2.61
MBD3-205ENST00000589064 SCAF11Q99590 1463 aaKnown RBP31.35■■■□□ 2.61
MBD3-205ENST00000589064 SLIT1O75093 1534 aa31.34■■■□□ 2.61
MBD3-205ENST00000589064 TET3O43151 1660 aa31.33■■■□□ 2.61
MBD3-205ENST00000589064 NAIPQ13075 1403 aa31.32■■■□□ 2.6
MBD3-205ENST00000589064 IQSEC2Q5JU85 1478 aa31.31■■■□□ 2.6
MBD3-205ENST00000589064 CHGAP10645 457 aaKnown RBP31.27■■■□□ 2.6
MBD3-205ENST00000589064 IQGAP3Q86VI3 1631 aa31.27■■■□□ 2.6
MBD3-205ENST00000589064 UBAP1LF5GYI3 381 aa31.27■■■□□ 2.6
MBD3-205ENST00000589064 IQGAP1P46940 1657 aa31.25■■■□□ 2.59
MBD3-205ENST00000589064 TRIM52Q96A61 297 aa31.23■■■□□ 2.59
MBD3-205ENST00000589064 GCC2Q8IWJ2 1684 aa31.23■■■□□ 2.59
MBD3-205ENST00000589064 CPS1P31327 1500 aa31.22■■■□□ 2.59
MBD3-205ENST00000589064 HFM1A2PYH4 1435 aa31.22■■■□□ 2.59
MBD3-205ENST00000589064 E9PCH4 1651 aa31.21■■■□□ 2.59
MBD3-205ENST00000589064 ADGRB3O60242 1522 aa31.21■■■□□ 2.59
MBD3-205ENST00000589064 SENP3Q9H4L4 574 aaPredicted RBP31.2■■■□□ 2.58
MBD3-205ENST00000589064 BCANQ96GW7 911 aa31.19■■■□□ 2.58
MBD3-205ENST00000589064 SLC26A8Q96RN1 970 aa31.19■■■□□ 2.58
MBD3-205ENST00000589064 KDM5AP29375 1690 aaKnown RBP31.18■■■□□ 2.58
MBD3-205ENST00000589064 HDGFP51858 240 aaKnown RBP31.18■■■□□ 2.58
MBD3-205ENST00000589064 PPP1R15AO75807 674 aaPredicted RBP31.14■■■□□ 2.58
MBD3-205ENST00000589064 RIMS2Q9UQ26 1411 aa31.14■■■□□ 2.58
MBD3-205ENST00000589064 NUTM2DQ5VT03 806 aaPredicted RBP31.13■■■□□ 2.57
MBD3-205ENST00000589064 ZFYVE9O95405 1425 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms