RNA–Protein interactions for RNA: ENST00000588961.1

KDM4B-207, Transcript of lysine demethylase 4B, humanhuman

TSL 4

Gene KDM4B, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-207ENST00000588961 RRP7BPQ9NSQ0 103 aa12.96□□□□□ -0.33
KDM4B-207ENST00000588961 REREQ9P2R6 1566 aa12.95□□□□□ -0.34
KDM4B-207ENST00000588961 MAST1Q9Y2H9 1570 aa12.95□□□□□ -0.34
KDM4B-207ENST00000588961 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.95□□□□□ -0.345e-6■■□□□ 14
KDM4B-207ENST00000588961 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
KDM4B-207ENST00000588961 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
KDM4B-207ENST00000588961 ADGBQ8N7X0 1667 aa12.94□□□□□ -0.34
KDM4B-207ENST00000588961 ADAMTSL3P82987 1691 aa12.93□□□□□ -0.34
KDM4B-207ENST00000588961 GGT6Q6P531 493 aa12.93□□□□□ -0.34
KDM4B-207ENST00000588961 PTPRKQ15262 1439 aa12.93□□□□□ -0.34
KDM4B-207ENST00000588961 AGLP35573 1532 aa12.93□□□□□ -0.34
KDM4B-207ENST00000588961 SHANK2Q9UPX8 1470 aa12.92□□□□□ -0.34
KDM4B-207ENST00000588961 MADDQ8WXG6 1647 aa12.92□□□□□ -0.34
KDM4B-207ENST00000588961 KIF3BO15066 747 aa12.92□□□□□ -0.34
KDM4B-207ENST00000588961 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.92□□□□□ -0.342e-6■■■■□ 23
KDM4B-207ENST00000588961 PLXNC1O60486 1568 aa12.91□□□□□ -0.34
KDM4B-207ENST00000588961 KIF15Q9NS87 1388 aa12.91□□□□□ -0.34
KDM4B-207ENST00000588961 ANKRD30AQ9BXX3 1397 aa12.9□□□□□ -0.34
KDM4B-207ENST00000588961 RIMS1Q86UR5 1692 aaKnown RBP12.89□□□□□ -0.35
KDM4B-207ENST00000588961 NCOA1Q15788 1441 aa12.89□□□□□ -0.35
KDM4B-207ENST00000588961 ESF1Q9H501 851 aaKnown RBP12.89□□□□□ -0.35
KDM4B-207ENST00000588961 PTPRMP28827 1452 aa12.88□□□□□ -0.35
KDM4B-207ENST00000588961 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
KDM4B-207ENST00000588961 FER1L4A9Z1Z3 1794 aa12.87□□□□□ -0.35
KDM4B-207ENST00000588961 CEBPAP49715 358 aaPredicted RBP12.87□□□□□ -0.35
KDM4B-207ENST00000588961 ADGRL2O95490 1459 aa12.86□□□□□ -0.35
KDM4B-207ENST00000588961 RNF39Q9H2S5 420 aa12.86□□□□□ -0.35
KDM4B-207ENST00000588961 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
KDM4B-207ENST00000588961 ERBINQ96RT1 1412 aa12.83□□□□□ -0.36
KDM4B-207ENST00000588961 WASHC2CQ9Y4E1 1318 aa12.83□□□□□ -0.36
KDM4B-207ENST00000588961 ROCK1Q13464 1354 aa12.82□□□□□ -0.36
KDM4B-207ENST00000588961 EIF2AK4Q9P2K8 1649 aaKnown RBP12.82□□□□□ -0.36
KDM4B-207ENST00000588961 CLTCQ00610 1675 aaKnown RBP12.82□□□□□ -0.36
KDM4B-207ENST00000588961 ANKRD50Q9ULJ7 1429 aa12.81□□□□□ -0.36
KDM4B-207ENST00000588961 ZMYM3Q14202 1370 aa12.81□□□□□ -0.36
KDM4B-207ENST00000588961 ACIN1Q9UKV3 1341 aaKnown RBP12.8□□□□□ -0.36
KDM4B-207ENST00000588961 RNF17Q9BXT8 1623 aaKnown RBP12.8□□□□□ -0.36
KDM4B-207ENST00000588961 CNTLNQ9NXG0 1405 aa12.79□□□□□ -0.36
KDM4B-207ENST00000588961 C3P01024 1663 aa12.79□□□□□ -0.36
KDM4B-207ENST00000588961 MROH1Q8NDA8 1641 aa12.78□□□□□ -0.36
KDM4B-207ENST00000588961 KDM5DQ9BY66 1539 aa12.78□□□□□ -0.36
KDM4B-207ENST00000588961 MROH2AA6NES4 1674 aa12.77□□□□□ -0.37
KDM4B-207ENST00000588961 FBXO31Q5XUX0 539 aaPredicted RBP12.76□□□□□ -0.37
KDM4B-207ENST00000588961 KANK1Q14678 1352 aa12.76□□□□□ -0.37
KDM4B-207ENST00000588961 NAIPQ13075 1403 aa12.76□□□□□ -0.37
KDM4B-207ENST00000588961 ABCC3O15438 1527 aa12.76□□□□□ -0.37
KDM4B-207ENST00000588961 DEPDC5O75140 1603 aa12.75□□□□□ -0.37
KDM4B-207ENST00000588961 CEP152O94986 1710 aa12.75□□□□□ -0.37
KDM4B-207ENST00000588961 PRDM15P57071 1507 aaPredicted RBP12.74□□□□□ -0.37
KDM4B-207ENST00000588961 HFM1A2PYH4 1435 aa12.72□□□□□ -0.37
KDM4B-207ENST00000588961 TIMELESSQ9UNS1 1208 aa12.72□□□□□ -0.37
KDM4B-207ENST00000588961 U3KPZ7 1027 aaPredicted RBP12.72□□□□□ -0.37
KDM4B-207ENST00000588961 ZC3H13Q5T200 1668 aaKnown RBP12.72□□□□□ -0.37
KDM4B-207ENST00000588961 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
KDM4B-207ENST00000588961 NUP155O75694 1391 aa12.71□□□□□ -0.37
KDM4B-207ENST00000588961 GCC2Q8IWJ2 1684 aa12.71□□□□□ -0.37
KDM4B-207ENST00000588961 CAMSAP1Q5T5Y3 1602 aa12.71□□□□□ -0.37
KDM4B-207ENST00000588961 VWDEQ8N2E2 1590 aa12.71□□□□□ -0.37
KDM4B-207ENST00000588961 PZPP20742 1482 aa12.71□□□□□ -0.38
KDM4B-207ENST00000588961 UNC13BO14795 1591 aa12.7□□□□□ -0.38
KDM4B-207ENST00000588961 HSPA2P54652 639 aa12.7□□□□□ -0.38
KDM4B-207ENST00000588961 C1QBPQ07021 282 aaKnown RBP12.7□□□□□ -0.38
KDM4B-207ENST00000588961 TRIM52Q96A61 297 aa12.7□□□□□ -0.38
KDM4B-207ENST00000588961 NPATQ14207 1427 aa12.7□□□□□ -0.38
KDM4B-207ENST00000588961 DHX57Q6P158 1386 aaKnown RBP12.69□□□□□ -0.38
KDM4B-207ENST00000588961 LMTK3Q96Q04 1460 aa12.69□□□□□ -0.38
KDM4B-207ENST00000588961 SETD5Q9C0A6 1442 aa12.69□□□□□ -0.38
KDM4B-207ENST00000588961 LMTK2Q8IWU2 1503 aa12.68□□□□□ -0.38
KDM4B-207ENST00000588961 UHRF1BP1Q6BDS2 1440 aa12.68□□□□□ -0.38
KDM4B-207ENST00000588961 CFAP65Q6ZU64 1925 aaKnown RBP12.68□□□□□ -0.38
KDM4B-207ENST00000588961 TNRQ92752 1358 aa12.68□□□□□ -0.38
KDM4B-207ENST00000588961 PREX1Q8TCU6 1659 aa12.67□□□□□ -0.38
KDM4B-207ENST00000588961 FOXD4L1Q9NU39 408 aa12.67□□□□□ -0.38
KDM4B-207ENST00000588961 ARHGAP31Q2M1Z3 1444 aa12.66□□□□□ -0.38
KDM4B-207ENST00000588961 IQGAP3Q86VI3 1631 aa12.66□□□□□ -0.38
KDM4B-207ENST00000588961 ERVK-7P63135 1459 aa12.65□□□□□ -0.38
KDM4B-207ENST00000588961 SETD1BQ9UPS6 1966 aaKnown RBP12.65□□□□□ -0.38
KDM4B-207ENST00000588961 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
KDM4B-207ENST00000588961 EFCAB6Q5THR3 1501 aa12.65□□□□□ -0.38
KDM4B-207ENST00000588961 MYO3AQ8NEV4 1616 aa12.64□□□□□ -0.39
KDM4B-207ENST00000588961 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
KDM4B-207ENST00000588961 SPATA31D1Q6ZQQ2 1576 aa12.64□□□□□ -0.39
KDM4B-207ENST00000588961 TET3O43151 1660 aa12.64□□□□□ -0.39
KDM4B-207ENST00000588961 RAB3GAP2Q9H2M9 1393 aa12.63□□□□□ -0.39
KDM4B-207ENST00000588961 E9PCH4 1651 aa12.62□□□□□ -0.39
KDM4B-207ENST00000588961 CEP170BQ9Y4F5 1589 aaPredicted RBP12.61□□□□□ -0.39
KDM4B-207ENST00000588961 A2ML1A8K2U0 1454 aa12.61□□□□□ -0.39
KDM4B-207ENST00000588961 ZBTB22O15209 634 aa12.61□□□□□ -0.39
KDM4B-207ENST00000588961 PKD2Q13563 968 aa12.6□□□□□ -0.39
KDM4B-207ENST00000588961 IDI1Q13907 227 aa12.6□□□□□ -0.39
KDM4B-207ENST00000588961 NOS1P29475 1434 aa12.6□□□□□ -0.39
KDM4B-207ENST00000588961 SYNMO15061 1565 aa12.6□□□□□ -0.39
KDM4B-207ENST00000588961 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
KDM4B-207ENST00000588961 NLRP1Q9C000 1473 aa12.59□□□□□ -0.39
KDM4B-207ENST00000588961 MPHOSPH9Q99550 1183 aa12.59□□□□□ -0.39
KDM4B-207ENST00000588961 ZNF142P52746 1687 aaPredicted RBP12.58□□□□□ -0.4
KDM4B-207ENST00000588961 NCKAP5LQ9HCH0 1330 aa12.58□□□□□ -0.4
KDM4B-207ENST00000588961 UGGT1Q9NYU2 1555 aa12.57□□□□□ -0.4
KDM4B-207ENST00000588961 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
KDM4B-207ENST00000588961 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms