RNA–Protein interactions for RNA: ENST00000588941.1

RDH13-211, Transcript of retinol dehydrogenase 13, humanhuman

TSL 3

Gene RDH13, Length 702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-211ENST00000588941 ARHGEF5Q12774 1597 aa11.84□□□□□ -0.51
RDH13-211ENST00000588941 CERKQ8TCT0 537 aa11.83□□□□□ -0.52
RDH13-211ENST00000588941 SCAF1Q9H7N4 1312 aaKnown RBP11.83□□□□□ -0.52
RDH13-211ENST00000588941 FBXO31Q5XUX0 539 aaPredicted RBP11.82□□□□□ -0.52
RDH13-211ENST00000588941 PTPRKQ15262 1439 aa11.81□□□□□ -0.52
RDH13-211ENST00000588941 RRP7BPQ9NSQ0 103 aa11.81□□□□□ -0.52
RDH13-211ENST00000588941 STRCQ7RTU9 1775 aa11.81□□□□□ -0.52
RDH13-211ENST00000588941 CHIC2Q9UKJ5 165 aa11.8□□□□□ -0.52
RDH13-211ENST00000588941 NCKAP5LQ9HCH0 1330 aa11.8□□□□□ -0.52
RDH13-211ENST00000588941 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
RDH13-211ENST00000588941 PTPN23Q9H3S7 1636 aa11.78□□□□□ -0.52
RDH13-211ENST00000588941 ABCC5O15440 1437 aa11.77□□□□□ -0.52
RDH13-211ENST00000588941 MAST1Q9Y2H9 1570 aa11.77□□□□□ -0.53
RDH13-211ENST00000588941 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.77□□□□□ -0.53
RDH13-211ENST00000588941 CAMSAP1Q5T5Y3 1602 aa11.77□□□□□ -0.53
RDH13-211ENST00000588941 PTPRTO14522 1441 aa11.77□□□□□ -0.53
RDH13-211ENST00000588941 FGD6Q6ZV73 1430 aa11.77□□□□□ -0.53
RDH13-211ENST00000588941 PKD2Q13563 968 aa11.76□□□□□ -0.53
RDH13-211ENST00000588941 TNRQ92752 1358 aa11.76□□□□□ -0.53
RDH13-211ENST00000588941 NCOA1Q15788 1441 aa11.76□□□□□ -0.53
RDH13-211ENST00000588941 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
RDH13-211ENST00000588941 KIF15Q9NS87 1388 aa11.75□□□□□ -0.53
RDH13-211ENST00000588941 PPARGC1BQ86YN6 1023 aaKnown RBP11.74□□□□□ -0.53
RDH13-211ENST00000588941 THEMISQ8N1K5 641 aaPredicted RBP11.74□□□□□ -0.53
RDH13-211ENST00000588941 DAPK1P53355 1430 aa11.74□□□□□ -0.53
RDH13-211ENST00000588941 DUOX2Q9NRD8 1548 aa11.74□□□□□ -0.53
RDH13-211ENST00000588941 CEP170BQ9Y4F5 1589 aaPredicted RBP11.74□□□□□ -0.53
RDH13-211ENST00000588941 MYO3AQ8NEV4 1616 aa11.74□□□□□ -0.53
RDH13-211ENST00000588941 PZPP20742 1482 aa11.73□□□□□ -0.53
RDH13-211ENST00000588941 FAM135AQ9P2D6 1515 aa11.72□□□□□ -0.53
RDH13-211ENST00000588941 A2ML1A8K2U0 1454 aa11.72□□□□□ -0.53
RDH13-211ENST00000588941 TCOF1Q13428 1488 aaKnown RBP11.72□□□□□ -0.53
RDH13-211ENST00000588941 ANKRD30AQ9BXX3 1397 aa11.72□□□□□ -0.53
RDH13-211ENST00000588941 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
RDH13-211ENST00000588941 CFAP65Q6ZU64 1925 aaKnown RBP11.72□□□□□ -0.53
RDH13-211ENST00000588941 DNMT1P26358 1616 aaKnown RBP11.71□□□□□ -0.54
RDH13-211ENST00000588941 EIF2AK4Q9P2K8 1649 aaKnown RBP11.71□□□□□ -0.54
RDH13-211ENST00000588941 SHANK2Q9UPX8 1470 aa11.7□□□□□ -0.54
RDH13-211ENST00000588941 KANK1Q14678 1352 aa11.7□□□□□ -0.54
RDH13-211ENST00000588941 PPP4R3CPQ6ZMV5 832 aa11.7□□□□□ -0.54
RDH13-211ENST00000588941 ZNF142P52746 1687 aaPredicted RBP11.7□□□□□ -0.54
RDH13-211ENST00000588941 ABCC3O15438 1527 aa11.7□□□□□ -0.54
RDH13-211ENST00000588941 PLA2R1Q13018 1463 aa11.7□□□□□ -0.54
RDH13-211ENST00000588941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.69□□□□□ -0.54
RDH13-211ENST00000588941 ZNF335Q9H4Z2 1342 aaPredicted RBP11.69□□□□□ -0.54
RDH13-211ENST00000588941 RNF17Q9BXT8 1623 aaKnown RBP11.69□□□□□ -0.54
RDH13-211ENST00000588941 ERBINQ96RT1 1412 aa11.69□□□□□ -0.54
RDH13-211ENST00000588941 CROCC2H7BZ55 1655 aa11.68□□□□□ -0.54
RDH13-211ENST00000588941 ITGAEP38570 1179 aa11.68□□□□□ -0.54
RDH13-211ENST00000588941 CEP152O94986 1710 aa11.67□□□□□ -0.54
RDH13-211ENST00000588941 NLRP1Q9C000 1473 aa11.67□□□□□ -0.54
RDH13-211ENST00000588941 ZC3H13Q5T200 1668 aaKnown RBP11.67□□□□□ -0.54
RDH13-211ENST00000588941 UGGT1Q9NYU2 1555 aa11.67□□□□□ -0.54
RDH13-211ENST00000588941 STAG3Q9UJ98 1225 aa11.66□□□□□ -0.54
RDH13-211ENST00000588941 MROH1Q8NDA8 1641 aa11.66□□□□□ -0.54
RDH13-211ENST00000588941 LTBP4Q8N2S1 1624 aa11.65□□□□□ -0.54
RDH13-211ENST00000588941 ERVK-7P63135 1459 aa11.64□□□□□ -0.55
RDH13-211ENST00000588941 SPATA31D1Q6ZQQ2 1576 aa11.64□□□□□ -0.55
RDH13-211ENST00000588941 ARHGAP31Q2M1Z3 1444 aa11.63□□□□□ -0.55
RDH13-211ENST00000588941 UBAP1LF5GYI3 381 aa11.63□□□□□ -0.55
RDH13-211ENST00000588941 TXNDC2Q86VQ3 553 aa11.63□□□□□ -0.55
RDH13-211ENST00000588941 ANKRD50Q9ULJ7 1429 aa11.62□□□□□ -0.55
RDH13-211ENST00000588941 PRDM15P57071 1507 aaPredicted RBP11.62□□□□□ -0.55
RDH13-211ENST00000588941 EID1Q9Y6B2 187 aa11.62□□□□□ -0.55
RDH13-211ENST00000588941 ADGRL2O95490 1459 aa11.62□□□□□ -0.55
RDH13-211ENST00000588941 IDI1Q13907 227 aa11.61□□□□□ -0.55
RDH13-211ENST00000588941 NPHP4O75161 1426 aaPredicted RBP11.6□□□□□ -0.55
RDH13-211ENST00000588941 POLR1AO95602 1720 aaPredicted RBP11.6□□□□□ -0.55
RDH13-211ENST00000588941 DCAF8L1A6NGE4 600 aa11.6□□□□□ -0.55
RDH13-211ENST00000588941 LTKP29376 864 aa11.6□□□□□ -0.55
RDH13-211ENST00000588941 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
RDH13-211ENST00000588941 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
RDH13-211ENST00000588941 NEURL4Q96JN8 1562 aa11.58□□□□□ -0.55
RDH13-211ENST00000588941 SLC52A1Q9NWF4 448 aa11.58□□□□□ -0.56
RDH13-211ENST00000588941 UBR1Q8IWV7 1749 aa11.57□□□□□ -0.56
RDH13-211ENST00000588941 MED14O60244 1454 aa11.57□□□□□ -0.56
RDH13-211ENST00000588941 LMTK2Q8IWU2 1503 aa11.57□□□□□ -0.56
RDH13-211ENST00000588941 BCANQ96GW7 911 aa11.57□□□□□ -0.56
RDH13-211ENST00000588941 ROCK1Q13464 1354 aa11.56□□□□□ -0.56
RDH13-211ENST00000588941 TOM1O60784 492 aa11.56□□□□□ -0.56
RDH13-211ENST00000588941 CHGAP10645 457 aaKnown RBP11.56□□□□□ -0.56
RDH13-211ENST00000588941 PIP4K2BP78356 416 aa11.56□□□□□ -0.56
RDH13-211ENST00000588941 VWDEQ8N2E2 1590 aa11.56□□□□□ -0.56
RDH13-211ENST00000588941 PIK3C2BO00750 1634 aa11.55□□□□□ -0.56
RDH13-211ENST00000588941 SCAF11Q99590 1463 aaKnown RBP11.55□□□□□ -0.56
RDH13-211ENST00000588941 IQGAP1P46940 1657 aa11.55□□□□□ -0.56
RDH13-211ENST00000588941 NUP155O75694 1391 aa11.54□□□□□ -0.56
RDH13-211ENST00000588941 TMEM2Q9UHN6 1383 aa11.54□□□□□ -0.56
RDH13-211ENST00000588941 ILDR2Q71H61 639 aa11.54□□□□□ -0.56
RDH13-211ENST00000588941 CPS1P31327 1500 aa11.54□□□□□ -0.56
RDH13-211ENST00000588941 NOS1P29475 1434 aa11.53□□□□□ -0.56
RDH13-211ENST00000588941 HDGFP51858 240 aaKnown RBP11.53□□□□□ -0.56
RDH13-211ENST00000588941 EFCAB6Q5THR3 1501 aa11.53□□□□□ -0.56
RDH13-211ENST00000588941 ARHGAP23Q9P227 1491 aa11.52□□□□□ -0.56
RDH13-211ENST00000588941 SLIT1O75093 1534 aa11.52□□□□□ -0.57
RDH13-211ENST00000588941 HOXD11P31277 338 aaPredicted RBP11.52□□□□□ -0.57
RDH13-211ENST00000588941 CACNB1Q02641 598 aaPredicted RBP11.52□□□□□ -0.57
RDH13-211ENST00000588941 SLC26A8Q96RN1 970 aa11.52□□□□□ -0.57
RDH13-211ENST00000588941 SYNMO15061 1565 aa11.52□□□□□ -0.57
RDH13-211ENST00000588941 DISP3Q9P2K9 1392 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms