RNA–Protein interactions for RNA: ENST00000588858.5

C19orf53-204, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 3

Gene C19orf53, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-204ENST00000588858 PRDM15P57071 1507 aaPredicted RBP12.16□□□□□ -0.46
C19orf53-204ENST00000588858 VWDEQ8N2E2 1590 aa12.16□□□□□ -0.46
C19orf53-204ENST00000588858 MROH1Q8NDA8 1641 aa12.15□□□□□ -0.46
C19orf53-204ENST00000588858 SETD5Q9C0A6 1442 aa12.15□□□□□ -0.46
C19orf53-204ENST00000588858 CNTLNQ9NXG0 1405 aa12.15□□□□□ -0.46
C19orf53-204ENST00000588858 LMTK2Q8IWU2 1503 aa12.15□□□□□ -0.46
C19orf53-204ENST00000588858 UNC13BO14795 1591 aa12.14□□□□□ -0.47
C19orf53-204ENST00000588858 ADAMTSL3P82987 1691 aa12.14□□□□□ -0.47
C19orf53-204ENST00000588858 KIF3BO15066 747 aa12.14□□□□□ -0.47
C19orf53-204ENST00000588858 ZC3H13Q5T200 1668 aaKnown RBP12.12□□□□□ -0.47
C19orf53-204ENST00000588858 ARID4BQ4LE39 1312 aaPredicted RBP12.11□□□□□ -0.47
C19orf53-204ENST00000588858 ARHGAP31Q2M1Z3 1444 aa12.11□□□□□ -0.47
C19orf53-204ENST00000588858 KANK1Q14678 1352 aa12.1□□□□□ -0.47
C19orf53-204ENST00000588858 ABCC3O15438 1527 aa12.1□□□□□ -0.47
C19orf53-204ENST00000588858 MROH2AA6NES4 1674 aa12.1□□□□□ -0.47
C19orf53-204ENST00000588858 RAB3GAP2Q9H2M9 1393 aa12.09□□□□□ -0.47
C19orf53-204ENST00000588858 IQGAP3Q86VI3 1631 aa12.09□□□□□ -0.47
C19orf53-204ENST00000588858 GGT6Q6P531 493 aa12.08□□□□□ -0.48
C19orf53-204ENST00000588858 RPRD2Q5VT52 1461 aaKnown RBP12.07□□□□□ -0.48
C19orf53-204ENST00000588858 NUP155O75694 1391 aa12.06□□□□□ -0.48
C19orf53-204ENST00000588858 MADDQ8WXG6 1647 aa12.06□□□□□ -0.48
C19orf53-204ENST00000588858 WASHC2CQ9Y4E1 1318 aa12.06□□□□□ -0.48
C19orf53-204ENST00000588858 FER1L4A9Z1Z3 1794 aa12.05□□□□□ -0.48
C19orf53-204ENST00000588858 KDM4FA0A1W2PPD8 638 aa12.05□□□□□ -0.48
C19orf53-204ENST00000588858 PZPP20742 1482 aa12.05□□□□□ -0.48
C19orf53-204ENST00000588858 TET3O43151 1660 aa12.05□□□□□ -0.48
C19orf53-204ENST00000588858 EFCAB6Q5THR3 1501 aa12.05□□□□□ -0.48
C19orf53-204ENST00000588858 NPATQ14207 1427 aa12.04□□□□□ -0.48
C19orf53-204ENST00000588858 ZMYM3Q14202 1370 aa12.04□□□□□ -0.48
C19orf53-204ENST00000588858 PTPRMP28827 1452 aa12.03□□□□□ -0.48
C19orf53-204ENST00000588858 MLECQ14165 292 aa12.03□□□□□ -0.48
C19orf53-204ENST00000588858 ESF1Q9H501 851 aaKnown RBP12.03□□□□□ -0.48
C19orf53-204ENST00000588858 CAMSAP1Q5T5Y3 1602 aa12.02□□□□□ -0.49
C19orf53-204ENST00000588858 CLTCQ00610 1675 aaKnown RBP12.02□□□□□ -0.49
C19orf53-204ENST00000588858 PTPRTO14522 1441 aa12.01□□□□□ -0.49
C19orf53-204ENST00000588858 NOS1P29475 1434 aa12.01□□□□□ -0.49
C19orf53-204ENST00000588858 SPATA31D1Q6ZQQ2 1576 aa12.01□□□□□ -0.49
C19orf53-204ENST00000588858 CEP152O94986 1710 aa12□□□□□ -0.49
C19orf53-204ENST00000588858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.491e-8■■■□□ 14.7
C19orf53-204ENST00000588858 RIMS1Q86UR5 1692 aaKnown RBP12□□□□□ -0.49
C19orf53-204ENST00000588858 MPHOSPH9Q99550 1183 aa11.99□□□□□ -0.49
C19orf53-204ENST00000588858 ERVK-7P63135 1459 aa11.99□□□□□ -0.49
C19orf53-204ENST00000588858 C3P01024 1663 aa11.99□□□□□ -0.49
C19orf53-204ENST00000588858 SETD1BQ9UPS6 1966 aaKnown RBP11.98□□□□□ -0.49
C19orf53-204ENST00000588858 TRIM52Q96A61 297 aa11.98□□□□□ -0.49
C19orf53-204ENST00000588858 PCGF6Q9BYE7 350 aa11.98□□□□□ -0.49
C19orf53-204ENST00000588858 SLC4A1APQ9BWU0 796 aaKnown RBP11.97□□□□□ -0.49
C19orf53-204ENST00000588858 E9PCH4 1651 aa11.97□□□□□ -0.49
C19orf53-204ENST00000588858 NLRP1Q9C000 1473 aa11.95□□□□□ -0.5
C19orf53-204ENST00000588858 PREX1Q8TCU6 1659 aa11.95□□□□□ -0.5
C19orf53-204ENST00000588858 PKD2Q13563 968 aa11.95□□□□□ -0.5
C19orf53-204ENST00000588858 SLC52A1Q9NWF4 448 aa11.95□□□□□ -0.5
C19orf53-204ENST00000588858 TRPM2O94759 1503 aa11.95□□□□□ -0.5
C19orf53-204ENST00000588858 PLA2R1Q13018 1463 aa11.95□□□□□ -0.5
C19orf53-204ENST00000588858 TNRQ92752 1358 aa11.94□□□□□ -0.5
C19orf53-204ENST00000588858 DHX57Q6P158 1386 aaKnown RBP11.93□□□□□ -0.5
C19orf53-204ENST00000588858 PIK3C2BO00750 1634 aa11.93□□□□□ -0.5
C19orf53-204ENST00000588858 ANKRD30BQ9BXX2 1392 aa11.92□□□□□ -0.5
C19orf53-204ENST00000588858 SYNMO15061 1565 aa11.92□□□□□ -0.5
C19orf53-204ENST00000588858 NEURL4Q96JN8 1562 aa11.92□□□□□ -0.5
C19orf53-204ENST00000588858 KDM5AP29375 1690 aaKnown RBP11.92□□□□□ -0.5
C19orf53-204ENST00000588858 CEBPAP49715 358 aaPredicted RBP11.92□□□□□ -0.5
C19orf53-204ENST00000588858 FBXO31Q5XUX0 539 aaPredicted RBP11.92□□□□□ -0.5
C19orf53-204ENST00000588858 CLSPNQ9HAW4 1339 aa11.91□□□□□ -0.5
C19orf53-204ENST00000588858 SPHKAPQ2M3C7 1700 aa11.91□□□□□ -0.5
C19orf53-204ENST00000588858 ZNF142P52746 1687 aaPredicted RBP11.91□□□□□ -0.5
C19orf53-204ENST00000588858 A2ML1A8K2U0 1454 aa11.9□□□□□ -0.5
C19orf53-204ENST00000588858 UHRF1BP1Q6BDS2 1440 aa11.89□□□□□ -0.51
C19orf53-204ENST00000588858 MYO3AQ8NEV4 1616 aa11.89□□□□□ -0.51
C19orf53-204ENST00000588858 CCDC144AA2RUR9 1427 aa11.87□□□□□ -0.51
C19orf53-204ENST00000588858 IDI1Q13907 227 aa11.87□□□□□ -0.51
C19orf53-204ENST00000588858 CEP170BQ9Y4F5 1589 aaPredicted RBP11.87□□□□□ -0.51
C19orf53-204ENST00000588858 ADGRB3O60242 1522 aa11.86□□□□□ -0.51
C19orf53-204ENST00000588858 LMTK3Q96Q04 1460 aa11.85□□□□□ -0.51
C19orf53-204ENST00000588858 CLTCL1P53675 1640 aa11.85□□□□□ -0.51
C19orf53-204ENST00000588858 SPATA31E1Q6ZUB1 1445 aa11.85□□□□□ -0.51
C19orf53-204ENST00000588858 UGGT1Q9NYU2 1555 aa11.84□□□□□ -0.51
C19orf53-204ENST00000588858 ARHGAP23Q9P227 1491 aa11.84□□□□□ -0.51
C19orf53-204ENST00000588858 TMEM131LA2VDJ0 1609 aa11.84□□□□□ -0.51
C19orf53-204ENST00000588858 SLIT1O75093 1534 aa11.84□□□□□ -0.51
C19orf53-204ENST00000588858 FOXD1Q16676 465 aa11.83□□□□□ -0.52
C19orf53-204ENST00000588858 THEMISQ8N1K5 641 aaPredicted RBP11.83□□□□□ -0.52
C19orf53-204ENST00000588858 CFAP65Q6ZU64 1925 aaKnown RBP11.83□□□□□ -0.52
C19orf53-204ENST00000588858 RPGRIP1LQ68CZ1 1315 aa11.83□□□□□ -0.52
C19orf53-204ENST00000588858 UBR1Q8IWV7 1749 aa11.83□□□□□ -0.52
C19orf53-204ENST00000588858 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
C19orf53-204ENST00000588858 TMEM2Q9UHN6 1383 aa11.8□□□□□ -0.52
C19orf53-204ENST00000588858 ZFYVE9O95405 1425 aa11.8□□□□□ -0.52
C19orf53-204ENST00000588858 TIMELESSQ9UNS1 1208 aa11.8□□□□□ -0.52
C19orf53-204ENST00000588858 KIF1BO60333 1816 aa11.79□□□□□ -0.52
C19orf53-204ENST00000588858 MED14O60244 1454 aa11.78□□□□□ -0.52
C19orf53-204ENST00000588858 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
C19orf53-204ENST00000588858 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.78□□□□□ -0.52
C19orf53-204ENST00000588858 AEBP2Q6ZN18 517 aaPredicted RBP11.77□□□□□ -0.53
C19orf53-204ENST00000588858 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
C19orf53-204ENST00000588858 PLPPR3Q6T4P5 718 aa11.76□□□□□ -0.53
C19orf53-204ENST00000588858 STAG3Q9UJ98 1225 aa11.76□□□□□ -0.53
C19orf53-204ENST00000588858 RIMS2Q9UQ26 1411 aa11.76□□□□□ -0.53
C19orf53-204ENST00000588858 MYOM2P54296 1465 aa11.76□□□□□ -0.53
C19orf53-204ENST00000588858 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms