RNA–Protein interactions for RNA: ENST00000588839.1

NFIC-205, Transcript of nuclear factor I C, humanhuman

TSL 3

Gene NFIC, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-205ENST00000588839 KIF3BO15066 747 aa23.17■■□□□ 1.3
NFIC-205ENST00000588839 PTPRTO14522 1441 aa23.16■■□□□ 1.3
NFIC-205ENST00000588839 KDM5DQ9BY66 1539 aa23.16■■□□□ 1.3
NFIC-205ENST00000588839 NCOA1Q15788 1441 aa23.16■■□□□ 1.3
NFIC-205ENST00000588839 CAMSAP1Q5T5Y3 1602 aa23.15■■□□□ 1.3
NFIC-205ENST00000588839 CERKQ8TCT0 537 aa23.15■■□□□ 1.3
NFIC-205ENST00000588839 CEP170BQ9Y4F5 1589 aaPredicted RBP23.14■■□□□ 1.29
NFIC-205ENST00000588839 EIF2AK4Q9P2K8 1649 aaKnown RBP23.11■■□□□ 1.29
NFIC-205ENST00000588839 WASHC2CQ9Y4E1 1318 aa23.09■■□□□ 1.29
NFIC-205ENST00000588839 RNF17Q9BXT8 1623 aaKnown RBP23.09■■□□□ 1.29
NFIC-205ENST00000588839 PLA2R1Q13018 1463 aa23.08■■□□□ 1.29
NFIC-205ENST00000588839 ZC3H13Q5T200 1668 aaKnown RBP23.08■■□□□ 1.29
NFIC-205ENST00000588839 PTPN23Q9H3S7 1636 aa23.08■■□□□ 1.28
NFIC-205ENST00000588839 CROCC2H7BZ55 1655 aa23.07■■□□□ 1.28
NFIC-205ENST00000588839 PZPP20742 1482 aa23.07■■□□□ 1.28
NFIC-205ENST00000588839 A2ML1A8K2U0 1454 aa23.05■■□□□ 1.28
NFIC-205ENST00000588839 SHANK2Q9UPX8 1470 aa23.04■■□□□ 1.28
NFIC-205ENST00000588839 DUOX2Q9NRD8 1548 aa23.03■■□□□ 1.28
NFIC-205ENST00000588839 TNRQ92752 1358 aa23.03■■□□□ 1.28
NFIC-205ENST00000588839 PKD2Q13563 968 aa23.03■■□□□ 1.28
NFIC-205ENST00000588839 DNMT1P26358 1616 aaKnown RBP23.02■■□□□ 1.28
NFIC-205ENST00000588839 TCOF1Q13428 1488 aaKnown RBP23■■□□□ 1.27
NFIC-205ENST00000588839 FGD6Q6ZV73 1430 aa22.99■■□□□ 1.27
NFIC-205ENST00000588839 NCKAP5LQ9HCH0 1330 aa22.99■■□□□ 1.27
NFIC-205ENST00000588839 POLR1AO95602 1720 aaPredicted RBP22.99■■□□□ 1.27
NFIC-205ENST00000588839 ABCC3O15438 1527 aa22.98■■□□□ 1.27
NFIC-205ENST00000588839 FBXO31Q5XUX0 539 aaPredicted RBP22.98■■□□□ 1.27
NFIC-205ENST00000588839 ABCC5O15440 1437 aa22.97■■□□□ 1.27
NFIC-205ENST00000588839 NLRP1Q9C000 1473 aa22.97■■□□□ 1.27
NFIC-205ENST00000588839 LTBP4Q8N2S1 1624 aa22.97■■□□□ 1.27
NFIC-205ENST00000588839 CEP152O94986 1710 aa22.96■■□□□ 1.27
NFIC-205ENST00000588839 KIF15Q9NS87 1388 aa22.96■■□□□ 1.27
NFIC-205ENST00000588839 DAPK1P53355 1430 aa22.96■■□□□ 1.27
NFIC-205ENST00000588839 MROH1Q8NDA8 1641 aa22.96■■□□□ 1.27
NFIC-205ENST00000588839 IQSEC2Q5JU85 1478 aa22.95■■□□□ 1.26
NFIC-205ENST00000588839 ERBINQ96RT1 1412 aa22.95■■□□□ 1.26
NFIC-205ENST00000588839 CFAP65Q6ZU64 1925 aaKnown RBP22.92■■□□□ 1.26
NFIC-205ENST00000588839 SPATA31D1Q6ZQQ2 1576 aa22.92■■□□□ 1.26
NFIC-205ENST00000588839 PRDM15P57071 1507 aaPredicted RBP22.92■■□□□ 1.26
NFIC-205ENST00000588839 UGGT1Q9NYU2 1555 aa22.91■■□□□ 1.26
NFIC-205ENST00000588839 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
NFIC-205ENST00000588839 THEMISQ8N1K5 641 aaPredicted RBP22.89■■□□□ 1.25
NFIC-205ENST00000588839 DEPDC5O75140 1603 aa22.89■■□□□ 1.25
NFIC-205ENST00000588839 ANKRD30AQ9BXX3 1397 aa22.89■■□□□ 1.25
NFIC-205ENST00000588839 ERVK-7P63135 1459 aa22.88■■□□□ 1.25
NFIC-205ENST00000588839 ZNF335Q9H4Z2 1342 aaPredicted RBP22.86■■□□□ 1.25
NFIC-205ENST00000588839 NEURL4Q96JN8 1562 aa22.85■■□□□ 1.25
NFIC-205ENST00000588839 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
NFIC-205ENST00000588839 KANK1Q14678 1352 aa22.85■■□□□ 1.25
NFIC-205ENST00000588839 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.84■■□□□ 1.25
NFIC-205ENST00000588839 ADRA2BP18089 450 aa22.83■■□□□ 1.25
NFIC-205ENST00000588839 ARHGAP31Q2M1Z3 1444 aa22.82■■□□□ 1.24
NFIC-205ENST00000588839 CHIC2Q9UKJ5 165 aa22.82■■□□□ 1.24
NFIC-205ENST00000588839 ADGRL2O95490 1459 aa22.8■■□□□ 1.24
NFIC-205ENST00000588839 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
NFIC-205ENST00000588839 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.8■■□□□ 1.24
NFIC-205ENST00000588839 UBR1Q8IWV7 1749 aa22.79■■□□□ 1.24
NFIC-205ENST00000588839 IQGAP1P46940 1657 aa22.79■■□□□ 1.24
NFIC-205ENST00000588839 MED14O60244 1454 aa22.79■■□□□ 1.24
NFIC-205ENST00000588839 CPS1P31327 1500 aa22.77■■□□□ 1.24
NFIC-205ENST00000588839 NPHP4O75161 1426 aaPredicted RBP22.77■■□□□ 1.24
NFIC-205ENST00000588839 LMTK2Q8IWU2 1503 aa22.76■■□□□ 1.23
NFIC-205ENST00000588839 VWDEQ8N2E2 1590 aa22.75■■□□□ 1.23
NFIC-205ENST00000588839 UBAP1LF5GYI3 381 aa22.71■■□□□ 1.23
NFIC-205ENST00000588839 ANKRD50Q9ULJ7 1429 aa22.7■■□□□ 1.22
NFIC-205ENST00000588839 EFCAB6Q5THR3 1501 aa22.7■■□□□ 1.22
NFIC-205ENST00000588839 PIK3C2BO00750 1634 aa22.7■■□□□ 1.22
NFIC-205ENST00000588839 KDM5AP29375 1690 aaKnown RBP22.7■■□□□ 1.22
NFIC-205ENST00000588839 SLIT1O75093 1534 aa22.68■■□□□ 1.22
NFIC-205ENST00000588839 SCAF11Q99590 1463 aaKnown RBP22.68■■□□□ 1.22
NFIC-205ENST00000588839 STAG3Q9UJ98 1225 aa22.66■■□□□ 1.22
NFIC-205ENST00000588839 ARHGAP23Q9P227 1491 aa22.66■■□□□ 1.22
NFIC-205ENST00000588839 EID1Q9Y6B2 187 aa22.64■■□□□ 1.21
NFIC-205ENST00000588839 TET3O43151 1660 aa22.64■■□□□ 1.21
NFIC-205ENST00000588839 SYNMO15061 1565 aa22.63■■□□□ 1.21
NFIC-205ENST00000588839 RPRD2Q5VT52 1461 aaKnown RBP22.63■■□□□ 1.21
NFIC-205ENST00000588839 PIAS4Q8N2W9 510 aaPredicted RBP22.63■■□□□ 1.21
NFIC-205ENST00000588839 GCC2Q8IWJ2 1684 aa22.62■■□□□ 1.21
NFIC-205ENST00000588839 TXNDC2Q86VQ3 553 aa22.62■■□□□ 1.21
NFIC-205ENST00000588839 UNC13BO14795 1591 aa22.62■■□□□ 1.21
NFIC-205ENST00000588839 ROCK1Q13464 1354 aa22.62■■□□□ 1.21
NFIC-205ENST00000588839 TOM1O60784 492 aa22.61■■□□□ 1.21
NFIC-205ENST00000588839 NOS1P29475 1434 aa22.61■■□□□ 1.21
NFIC-205ENST00000588839 STRCP1A6NGW2 1772 aa22.6■■□□□ 1.21
NFIC-205ENST00000588839 TMEM2Q9UHN6 1383 aa22.6■■□□□ 1.21
NFIC-205ENST00000588839 ADGRB3O60242 1522 aa22.58■■□□□ 1.21
NFIC-205ENST00000588839 IDI1Q13907 227 aa22.58■■□□□ 1.21
NFIC-205ENST00000588839 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.21
NFIC-205ENST00000588839 LTKP29376 864 aa22.57■■□□□ 1.2
NFIC-205ENST00000588839 DISP3Q9P2K9 1392 aa22.56■■□□□ 1.2
NFIC-205ENST00000588839 SCAF1Q9H7N4 1312 aaKnown RBP22.56■■□□□ 1.2
NFIC-205ENST00000588839 IQGAP3Q86VI3 1631 aa22.53■■□□□ 1.2
NFIC-205ENST00000588839 LRRC7Q96NW7 1537 aa22.53■■□□□ 1.2
NFIC-205ENST00000588839 PIP4K2BP78356 416 aa22.52■■□□□ 1.2
NFIC-205ENST00000588839 MYO5BQ9ULV0 1848 aa22.52■■□□□ 1.2
NFIC-205ENST00000588839 ITGAEP38570 1179 aa22.51■■□□□ 1.19
NFIC-205ENST00000588839 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
NFIC-205ENST00000588839 E9PCH4 1651 aa22.51■■□□□ 1.19
NFIC-205ENST00000588839 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
NFIC-205ENST00000588839 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms