RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 TCOF1Q13428 1488 aaKnown RBP30.09■■■□□ 2.41
CCDC130-209ENST00000588809 FGD6Q6ZV73 1430 aa30.09■■■□□ 2.41
CCDC130-209ENST00000588809 ILDR1Q86SU0 546 aaPredicted RBP30.09■■■□□ 2.41
CCDC130-209ENST00000588809 SHANK2Q9UPX8 1470 aa30.09■■■□□ 2.41
CCDC130-209ENST00000588809 KIF3BO15066 747 aa30.08■■■□□ 2.41
CCDC130-209ENST00000588809 ZC3H13Q5T200 1668 aaKnown RBP30.06■■■□□ 2.4
CCDC130-209ENST00000588809 DUOX2Q9NRD8 1548 aa30.03■■■□□ 2.4
CCDC130-209ENST00000588809 ABCC5O15440 1437 aa30.03■■■□□ 2.4
CCDC130-209ENST00000588809 CEP170BQ9Y4F5 1589 aaPredicted RBP30.03■■■□□ 2.4
CCDC130-209ENST00000588809 MROH1Q8NDA8 1641 aa30.02■■■□□ 2.4
CCDC130-209ENST00000588809 PZPP20742 1482 aa30■■■□□ 2.39
CCDC130-209ENST00000588809 DAPK1P53355 1430 aa29.99■■■□□ 2.39
CCDC130-209ENST00000588809 NCOA1Q15788 1441 aa29.99■■■□□ 2.39
CCDC130-209ENST00000588809 CAMSAP1Q5T5Y3 1602 aa29.99■■■□□ 2.39
CCDC130-209ENST00000588809 DMRT2Q9Y5R5 561 aa29.97■■■□□ 2.39
CCDC130-209ENST00000588809 CEP152O94986 1710 aa29.95■■■□□ 2.38
CCDC130-209ENST00000588809 ABCC3O15438 1527 aa29.95■■■□□ 2.38
CCDC130-209ENST00000588809 PTPRTO14522 1441 aa29.95■■■□□ 2.38
CCDC130-209ENST00000588809 WASHC2CQ9Y4E1 1318 aa29.94■■■□□ 2.38
CCDC130-209ENST00000588809 DEPDC5O75140 1603 aa29.93■■■□□ 2.38
CCDC130-209ENST00000588809 KIF15Q9NS87 1388 aa29.92■■■□□ 2.38
CCDC130-209ENST00000588809 ERBINQ96RT1 1412 aa29.92■■■□□ 2.38
CCDC130-209ENST00000588809 PLA2R1Q13018 1463 aa29.92■■■□□ 2.38
CCDC130-209ENST00000588809 A2ML1A8K2U0 1454 aa29.91■■■□□ 2.38
CCDC130-209ENST00000588809 PRDM15P57071 1507 aaPredicted RBP29.91■■■□□ 2.38
CCDC130-209ENST00000588809 FBXO41Q8TF61 875 aa29.9■■■□□ 2.38
CCDC130-209ENST00000588809 TNRQ92752 1358 aa29.87■■■□□ 2.37
CCDC130-209ENST00000588809 CFAP65Q6ZU64 1925 aaKnown RBP29.85■■■□□ 2.37
CCDC130-209ENST00000588809 ADGRL2O95490 1459 aa29.85■■■□□ 2.37
CCDC130-209ENST00000588809 POLR1AO95602 1720 aaPredicted RBP29.85■■■□□ 2.37
CCDC130-209ENST00000588809 FBXO31Q5XUX0 539 aaPredicted RBP29.84■■■□□ 2.37
CCDC130-209ENST00000588809 SPATA31D1Q6ZQQ2 1576 aa29.84■■■□□ 2.37
CCDC130-209ENST00000588809 ANKRD30AQ9BXX3 1397 aa29.82■■■□□ 2.36
CCDC130-209ENST00000588809 NLRP1Q9C000 1473 aa29.81■■■□□ 2.36
CCDC130-209ENST00000588809 RRP7BPQ9NSQ0 103 aa29.81■■■□□ 2.36
CCDC130-209ENST00000588809 CERKQ8TCT0 537 aa29.79■■■□□ 2.36
CCDC130-209ENST00000588809 ERVK-7P63135 1459 aa29.77■■■□□ 2.36
CCDC130-209ENST00000588809 LTBP4Q8N2S1 1624 aa29.77■■■□□ 2.36
CCDC130-209ENST00000588809 PKD2Q13563 968 aa29.76■■■□□ 2.35
CCDC130-209ENST00000588809 VWDEQ8N2E2 1590 aa29.75■■■□□ 2.35
CCDC130-209ENST00000588809 ARHGAP31Q2M1Z3 1444 aa29.74■■■□□ 2.35
CCDC130-209ENST00000588809 NCKAP5LQ9HCH0 1330 aa29.73■■■□□ 2.35
CCDC130-209ENST00000588809 UGGT1Q9NYU2 1555 aa29.73■■■□□ 2.35
CCDC130-209ENST00000588809 CHIC2Q9UKJ5 165 aa29.73■■■□□ 2.35
CCDC130-209ENST00000588809 NEURL4Q96JN8 1562 aa29.73■■■□□ 2.35
CCDC130-209ENST00000588809 FAM50AQ14320 339 aaKnown RBP29.72■■■□□ 2.35
CCDC130-209ENST00000588809 LMTK2Q8IWU2 1503 aa29.71■■■□□ 2.35
CCDC130-209ENST00000588809 UBR1Q8IWV7 1749 aa29.69■■■□□ 2.34
CCDC130-209ENST00000588809 KANK1Q14678 1352 aa29.65■■■□□ 2.34
CCDC130-209ENST00000588809 IQSEC2Q5JU85 1478 aa29.64■■■□□ 2.34
CCDC130-209ENST00000588809 THEMISQ8N1K5 641 aaPredicted RBP29.63■■■□□ 2.33
CCDC130-209ENST00000588809 ANKRD50Q9ULJ7 1429 aa29.62■■■□□ 2.33
CCDC130-209ENST00000588809 EFCAB6Q5THR3 1501 aa29.62■■■□□ 2.33
CCDC130-209ENST00000588809 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.61■■■□□ 2.33
CCDC130-209ENST00000588809 KDM5AP29375 1690 aaKnown RBP29.6■■■□□ 2.33
CCDC130-209ENST00000588809 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.6■■■□□ 2.331e-6■■□□□ 13
CCDC130-209ENST00000588809 MED14O60244 1454 aa29.6■■■□□ 2.33
CCDC130-209ENST00000588809 UNC13BO14795 1591 aa29.6■■■□□ 2.33
CCDC130-209ENST00000588809 IQGAP1P46940 1657 aa29.58■■■□□ 2.33
CCDC130-209ENST00000588809 ROCK1Q13464 1354 aa29.58■■■□□ 2.33
CCDC130-209ENST00000588809 PIK3C2BO00750 1634 aa29.56■■■□□ 2.32
CCDC130-209ENST00000588809 TET3O43151 1660 aa29.56■■■□□ 2.32
CCDC130-209ENST00000588809 GCC2Q8IWJ2 1684 aa29.56■■■□□ 2.32
CCDC130-209ENST00000588809 ZNF335Q9H4Z2 1342 aaPredicted RBP29.55■■■□□ 2.32
CCDC130-209ENST00000588809 ANKLE2Q86XL3 938 aa29.55■■■□□ 2.32
CCDC130-209ENST00000588809 SYNMO15061 1565 aa29.54■■■□□ 2.32
CCDC130-209ENST00000588809 SLIT1O75093 1534 aa29.51■■■□□ 2.32
CCDC130-209ENST00000588809 RPRD2Q5VT52 1461 aaKnown RBP29.5■■■□□ 2.31
CCDC130-209ENST00000588809 PPARGC1BQ86YN6 1023 aaKnown RBP29.5■■■□□ 2.31
CCDC130-209ENST00000588809 ARHGAP23Q9P227 1491 aa29.49■■■□□ 2.31
CCDC130-209ENST00000588809 NPHP4O75161 1426 aaPredicted RBP29.49■■■□□ 2.31
CCDC130-209ENST00000588809 NOS1P29475 1434 aa29.49■■■□□ 2.31
CCDC130-209ENST00000588809 IQGAP3Q86VI3 1631 aa29.48■■■□□ 2.31
CCDC130-209ENST00000588809 RRBP1Q9P2E9 1410 aaKnown RBP29.46■■■□□ 2.31
CCDC130-209ENST00000588809 CPS1P31327 1500 aa29.45■■■□□ 2.3
CCDC130-209ENST00000588809 E9PCH4 1651 aa29.44■■■□□ 2.3
CCDC130-209ENST00000588809 SCAF11Q99590 1463 aaKnown RBP29.43■■■□□ 2.3
CCDC130-209ENST00000588809 STRCP1A6NGW2 1772 aa29.41■■■□□ 2.3
CCDC130-209ENST00000588809 ADGRB3O60242 1522 aa29.4■■■□□ 2.3
CCDC130-209ENST00000588809 MYO5BQ9ULV0 1848 aa29.4■■■□□ 2.3
CCDC130-209ENST00000588809 IDI1Q13907 227 aa29.37■■■□□ 2.29
CCDC130-209ENST00000588809 TMEM2Q9UHN6 1383 aa29.36■■■□□ 2.29
CCDC130-209ENST00000588809 ITGAEP38570 1179 aa29.34■■■□□ 2.29
CCDC130-209ENST00000588809 LTKP29376 864 aa29.33■■■□□ 2.29
CCDC130-209ENST00000588809 SLC52A1Q9NWF4 448 aa29.33■■■□□ 2.29
CCDC130-209ENST00000588809 TMEM131LA2VDJ0 1609 aa29.31■■■□□ 2.28
CCDC130-209ENST00000588809 TXNDC2Q86VQ3 553 aa29.3■■■□□ 2.28
CCDC130-209ENST00000588809 STAG3Q9UJ98 1225 aa29.28■■■□□ 2.28
CCDC130-209ENST00000588809 EID1Q9Y6B2 187 aa29.28■■■□□ 2.28
CCDC130-209ENST00000588809 NUP155O75694 1391 aa29.26■■■□□ 2.27
CCDC130-209ENST00000588809 SPHKAPQ2M3C7 1700 aa29.25■■■□□ 2.27
CCDC130-209ENST00000588809 XIRP1Q702N8 1843 aaKnown RBP29.23■■■□□ 2.27
CCDC130-209ENST00000588809 NAIPQ13075 1403 aa29.22■■■□□ 2.27
CCDC130-209ENST00000588809 LRRC7Q96NW7 1537 aa29.22■■■□□ 2.27
CCDC130-209ENST00000588809 UBAP1LF5GYI3 381 aa29.22■■■□□ 2.27
CCDC130-209ENST00000588809 ZFYVE9O95405 1425 aa29.2■■■□□ 2.27
CCDC130-209ENST00000588809 ALKQ9UM73 1620 aa29.18■■■□□ 2.26
CCDC130-209ENST00000588809 HFM1A2PYH4 1435 aa29.16■■■□□ 2.26
CCDC130-209ENST00000588809 NWD1Q149M9 1564 aa29.12■■■□□ 2.25
CCDC130-209ENST00000588809 RIMS2Q9UQ26 1411 aa29.11■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms