RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 PLA2R1Q13018 1463 aa24.31■■□□□ 1.48
ERCC2-211ENST00000588652 TSHZ2Q9NRE2 1034 aa24.31■■□□□ 1.48
ERCC2-211ENST00000588652 BCORL1Q5H9F3 1711 aa24.3■■□□□ 1.48
ERCC2-211ENST00000588652 ABCA9Q8IUA7 1624 aa24.3■■□□□ 1.48
ERCC2-211ENST00000588652 DCAF11Q8TEB1 546 aa24.3■■□□□ 1.48
ERCC2-211ENST00000588652 BCANQ96GW7 911 aa24.29■■□□□ 1.48
ERCC2-211ENST00000588652 KDM2AQ9Y2K7 1162 aa24.28■■□□□ 1.48
ERCC2-211ENST00000588652 RTEL1-TNFRSF6BF6WH68 1400 aa24.28■■□□□ 1.48
ERCC2-211ENST00000588652 ZFYVE16Q7Z3T8 1539 aa24.26■■□□□ 1.47
ERCC2-211ENST00000588652 SPAG9O60271 1321 aaKnown RBP24.26■■□□□ 1.47
ERCC2-211ENST00000588652 AFAP1Q8N556 730 aa24.26■■□□□ 1.47
ERCC2-211ENST00000588652 FANCAO15360 1455 aa24.26■■□□□ 1.47
ERCC2-211ENST00000588652 CARD11Q9BXL7 1154 aa24.25■■□□□ 1.47
ERCC2-211ENST00000588652 NEFLP07196 543 aa24.24■■□□□ 1.47
ERCC2-211ENST00000588652 PRKRIP1Q9H875 184 aaPredicted RBP24.24■■□□□ 1.47
ERCC2-211ENST00000588652 OSCARQ8IYS5 282 aa24.24■■□□□ 1.47
ERCC2-211ENST00000588652 ATP10AO60312 1499 aa24.24■■□□□ 1.47
ERCC2-211ENST00000588652 ASXL2Q76L83 1435 aa24.24■■□□□ 1.47
ERCC2-211ENST00000588652 ARID4BQ4LE39 1312 aaPredicted RBP24.21■■□□□ 1.47
ERCC2-211ENST00000588652 MYT1Q01538 1121 aa24.21■■□□□ 1.47
ERCC2-211ENST00000588652 PRAG1Q86YV5 1406 aa24.19■■□□□ 1.46
ERCC2-211ENST00000588652 TRPM1Q7Z4N2 1603 aa24.19■■□□□ 1.46
ERCC2-211ENST00000588652 INO80Q9ULG1 1556 aaPredicted RBP24.18■■□□□ 1.46
ERCC2-211ENST00000588652 A2MP01023 1474 aa24.18■■□□□ 1.46
ERCC2-211ENST00000588652 RGL3Q3MIN7 710 aa24.18■■□□□ 1.46
ERCC2-211ENST00000588652 ATP7AQ04656 1500 aa24.17■■□□□ 1.46
ERCC2-211ENST00000588652 HNRNPUQ00839 825 aaKnown RBP eCLIP24.17■■□□□ 1.46
ERCC2-211ENST00000588652 ADGRL1O94910 1474 aa24.16■■□□□ 1.46
ERCC2-211ENST00000588652 ROCK2O75116 1388 aaKnown RBP24.16■■□□□ 1.46
ERCC2-211ENST00000588652 AEBP2Q6ZN18 517 aaPredicted RBP24.16■■□□□ 1.46
ERCC2-211ENST00000588652 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
ERCC2-211ENST00000588652 DEPDC5O75140 1603 aa24.15■■□□□ 1.46
ERCC2-211ENST00000588652 SCAPERQ9BY12 1400 aa24.14■■□□□ 1.46
ERCC2-211ENST00000588652 E9PCH4 1651 aa24.14■■□□□ 1.45
ERCC2-211ENST00000588652 ST20-MTHFSA0A0A6YYL1 179 aa24.13■■□□□ 1.45
ERCC2-211ENST00000588652 DHX29Q7Z478 1369 aaKnown RBP24.13■■□□□ 1.45
ERCC2-211ENST00000588652 POLR3GLQ9BT43 218 aa24.12■■□□□ 1.45
ERCC2-211ENST00000588652 NPM1P06748 294 aaKnown RBP eCLIP24.1■■□□□ 1.45
ERCC2-211ENST00000588652 GPRASP1Q5JY77 1395 aa24.08■■□□□ 1.45
ERCC2-211ENST00000588652 MRS2Q9HD23 443 aa24.07■■□□□ 1.44
ERCC2-211ENST00000588652 LAMC1P11047 1609 aa24.07■■□□□ 1.44
ERCC2-211ENST00000588652 EIF2AK4Q9P2K8 1649 aaKnown RBP24.06■■□□□ 1.44
ERCC2-211ENST00000588652 TET3O43151 1660 aa24.06■■□□□ 1.44
ERCC2-211ENST00000588652 NBPF1Q3BBV0 1214 aa24.06■■□□□ 1.44
ERCC2-211ENST00000588652 TRPM2O94759 1503 aa24.05■■□□□ 1.44
ERCC2-211ENST00000588652 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
ERCC2-211ENST00000588652 SPHKAPQ2M3C7 1700 aa24.05■■□□□ 1.44
ERCC2-211ENST00000588652 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
ERCC2-211ENST00000588652 KIDINS220Q9ULH0 1771 aa24.03■■□□□ 1.44
ERCC2-211ENST00000588652 PTPRTO14522 1441 aa24.03■■□□□ 1.44
ERCC2-211ENST00000588652 PRDM15P57071 1507 aaPredicted RBP24.02■■□□□ 1.44
ERCC2-211ENST00000588652 KIF3BO15066 747 aa24.02■■□□□ 1.44
ERCC2-211ENST00000588652 KANK1Q14678 1352 aa24.02■■□□□ 1.44
ERCC2-211ENST00000588652 CEP152O94986 1710 aa24.01■■□□□ 1.43
ERCC2-211ENST00000588652 ZNF518AQ6AHZ1 1483 aa24.01■■□□□ 1.43
ERCC2-211ENST00000588652 FAM9BQ8IZU0 186 aa24■■□□□ 1.43
ERCC2-211ENST00000588652 MROH1Q8NDA8 1641 aa24■■□□□ 1.43
ERCC2-211ENST00000588652 CD109Q6YHK3 1445 aa23.99■■□□□ 1.43
ERCC2-211ENST00000588652 CLTCL1P53675 1640 aa23.98■■□□□ 1.43
ERCC2-211ENST00000588652 CFAP74Q9C0B2 1584 aa23.98■■□□□ 1.43
ERCC2-211ENST00000588652 RNF17Q9BXT8 1623 aaKnown RBP23.97■■□□□ 1.43
ERCC2-211ENST00000588652 MADDQ8WXG6 1647 aa23.94■■□□□ 1.42
ERCC2-211ENST00000588652 CNGB1Q14028 1251 aaPredicted RBP23.93■■□□□ 1.42
ERCC2-211ENST00000588652 POGZQ7Z3K3 1410 aa23.92■■□□□ 1.42
ERCC2-211ENST00000588652 ZBED9Q6R2W3 1325 aa23.92■■□□□ 1.42
ERCC2-211ENST00000588652 COL17A1Q9UMD9 1497 aaPredicted RBP23.91■■□□□ 1.42
ERCC2-211ENST00000588652 TESK2Q96S53 571 aa23.91■■□□□ 1.42
ERCC2-211ENST00000588652 EFCAB6Q5THR3 1501 aa23.89■■□□□ 1.42
ERCC2-211ENST00000588652 STAC3Q96MF2 364 aa23.89■■□□□ 1.42
ERCC2-211ENST00000588652 IRX6P78412 446 aaPredicted RBP23.89■■□□□ 1.41
ERCC2-211ENST00000588652 MLH3Q9UHC1 1453 aa23.88■■□□□ 1.41
ERCC2-211ENST00000588652 NEURL4Q96JN8 1562 aa23.88■■□□□ 1.41
ERCC2-211ENST00000588652 DISP3Q9P2K9 1392 aa23.86■■□□□ 1.41
ERCC2-211ENST00000588652 HECW2Q9P2P5 1572 aa23.86■■□□□ 1.41
ERCC2-211ENST00000588652 KTN1Q86UP2 1357 aaKnown RBP23.86■■□□□ 1.41
ERCC2-211ENST00000588652 PPRC1Q5VV67 1664 aaKnown RBP23.86■■□□□ 1.41
ERCC2-211ENST00000588652 LMTK2Q8IWU2 1503 aa23.86■■□□□ 1.41
ERCC2-211ENST00000588652 IQGAP1P46940 1657 aa23.84■■□□□ 1.41
ERCC2-211ENST00000588652 RBM19Q9Y4C8 960 aaKnown RBP23.84■■□□□ 1.41
ERCC2-211ENST00000588652 FRMPD1Q5SYB0 1578 aa23.84■■□□□ 1.41
ERCC2-211ENST00000588652 ERICH6BQ5W0A0 696 aa23.83■■□□□ 1.41
ERCC2-211ENST00000588652 UGGT1Q9NYU2 1555 aa23.83■■□□□ 1.4
ERCC2-211ENST00000588652 RALBP1Q15311 655 aa23.82■■□□□ 1.4
ERCC2-211ENST00000588652 NEO1Q92859 1461 aa23.82■■□□□ 1.4
ERCC2-211ENST00000588652 KIF1BO60333 1816 aa23.81■■□□□ 1.4
ERCC2-211ENST00000588652 TMF1P82094 1093 aa23.81■■□□□ 1.4
ERCC2-211ENST00000588652 MYBBP1AQ9BQG0 1328 aaKnown RBP23.8■■□□□ 1.4
ERCC2-211ENST00000588652 PER1O15534 1290 aaPredicted RBP23.8■■□□□ 1.4
ERCC2-211ENST00000588652 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
ERCC2-211ENST00000588652 TMC1Q8TDI8 760 aa23.79■■□□□ 1.4
ERCC2-211ENST00000588652 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
ERCC2-211ENST00000588652 KIAA1210Q9ULL0 1709 aa23.78■■□□□ 1.4
ERCC2-211ENST00000588652 BRD4O60885 1362 aaPredicted RBP23.77■■□□□ 1.4
ERCC2-211ENST00000588652 SCAF11Q99590 1463 aaKnown RBP23.77■■□□□ 1.4
ERCC2-211ENST00000588652 PARD3Q8TEW0 1356 aa23.76■■□□□ 1.39
ERCC2-211ENST00000588652 MAP3K4Q9Y6R4 1608 aa23.75■■□□□ 1.39
ERCC2-211ENST00000588652 MYOM2P54296 1465 aa23.75■■□□□ 1.39
ERCC2-211ENST00000588652 IFT172Q9UG01 1749 aa23.75■■□□□ 1.39
ERCC2-211ENST00000588652 PPP4R2Q9NY27 417 aa23.74■■□□□ 1.39
ERCC2-211ENST00000588652 MROH2AA6NES4 1674 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms