RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, human

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-219	ENST00000588411	ABCC5	O15440	1437 aa		33.85	■■■■□ 3.01
CIRBP-219	ENST00000588411	DUOX2	Q9NRD8	1548 aa		33.83	■■■■□ 3.01
CIRBP-219	ENST00000588411	STRC	Q7RTU9	1775 aa		33.83	■■■■□ 3.01
CIRBP-219	ENST00000588411	FBXO41	Q8TF61	875 aa		33.82	■■■■□ 3
CIRBP-219	ENST00000588411	MYO3A	Q8NEV4	1616 aa		33.82	■■■■□ 3
CIRBP-219	ENST00000588411	EIF2AK4	Q9P2K8	1649 aa	Known RBP	33.82	■■■■□ 3
CIRBP-219	ENST00000588411	DAPK1	P53355	1430 aa		33.81	■■■■□ 3
CIRBP-219	ENST00000588411	NCOA1	Q15788	1441 aa		33.81	■■■■□ 3
CIRBP-219	ENST00000588411	PZP	P20742	1482 aa		33.81	■■■■□ 3
CIRBP-219	ENST00000588411	KIF15	Q9NS87	1388 aa		33.8	■■■■□ 3
CIRBP-219	ENST00000588411	RNF17	Q9BXT8	1623 aa	Known RBP	33.79	■■■■□ 3
CIRBP-219	ENST00000588411	CROCC2	H7BZ55	1655 aa		33.79	■■■■□ 3
CIRBP-219	ENST00000588411	PTPRT	O14522	1441 aa		33.79	■■■■□ 3
CIRBP-219	ENST00000588411	DNMT1	P26358	1616 aa	Known RBP	33.78	■■■■□ 3
CIRBP-219	ENST00000588411	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	33.77	■■■■□ 3
CIRBP-219	ENST00000588411	CAMSAP1	Q5T5Y3	1602 aa		33.77	■■■■□ 3
CIRBP-219	ENST00000588411	ZNF142	P52746	1687 aa	Predicted RBP	33.77	■■■■□ 3
CIRBP-219	ENST00000588411	TNR	Q92752	1358 aa		33.76	■■■■□ 3
CIRBP-219	ENST00000588411	RRP7BP	Q9NSQ0	103 aa		33.75	■■■□□ 2.99
CIRBP-219	ENST00000588411	ERBIN	Q96RT1	1412 aa		33.73	■■■□□ 2.99
CIRBP-219	ENST00000588411	A2ML1	A8K2U0	1454 aa		33.72	■■■□□ 2.99
CIRBP-219	ENST00000588411	FBXO31	Q5XUX0	539 aa	Predicted RBP	33.72	■■■□□ 2.99
CIRBP-219	ENST00000588411	ANKRD30A	Q9BXX3	1397 aa		33.72	■■■□□ 2.99
CIRBP-219	ENST00000588411	CERK	Q8TCT0	537 aa		33.71	■■■□□ 2.99
CIRBP-219	ENST00000588411	ZC3H13	Q5T200	1668 aa	Known RBP	33.71	■■■□□ 2.99
CIRBP-219	ENST00000588411	PLA2R1	Q13018	1463 aa		33.7	■■■□□ 2.99
CIRBP-219	ENST00000588411	ABCC3	O15438	1527 aa		33.7	■■■□□ 2.99
CIRBP-219	ENST00000588411	FAM50A	Q14320	339 aa	Known RBP	33.7	■■■□□ 2.99
CIRBP-219	ENST00000588411	PKD2	Q13563	968 aa		33.68	■■■□□ 2.98
CIRBP-219	ENST00000588411	CHIC2	Q9UKJ5	165 aa		33.67	■■■□□ 2.98
CIRBP-219	ENST00000588411	MROH1	Q8NDA8	1641 aa		33.64	■■■□□ 2.98
CIRBP-219	ENST00000588411	NCKAP5L	Q9HCH0	1330 aa		33.63	■■■□□ 2.97
CIRBP-219	ENST00000588411	NLRP1	Q9C000	1473 aa		33.63	■■■□□ 2.97
CIRBP-219	ENST00000588411	KANK1	Q14678	1352 aa		33.6	■■■□□ 2.97
CIRBP-219	ENST00000588411	PRDM15	P57071	1507 aa	Predicted RBP	33.59	■■■□□ 2.97
CIRBP-219	ENST00000588411	ADGRL2	O95490	1459 aa		33.57	■■■□□ 2.97
CIRBP-219	ENST00000588411	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	33.57	■■■□□ 2.96
CIRBP-219	ENST00000588411	THEMIS	Q8N1K5	641 aa	Predicted RBP	33.55	■■■□□ 2.96
CIRBP-219	ENST00000588411	SPATA31D1	Q6ZQQ2	1576 aa		33.55	■■■□□ 2.96
CIRBP-219	ENST00000588411	ERVK-7	P63135	1459 aa		33.54	■■■□□ 2.96
CIRBP-219	ENST00000588411	CEP152	O94986	1710 aa		33.53	■■■□□ 2.96
CIRBP-219	ENST00000588411	DEPDC5	O75140	1603 aa		33.51	■■■□□ 2.96
CIRBP-219	ENST00000588411	ARHGAP31	Q2M1Z3	1444 aa		33.51	■■■□□ 2.95
CIRBP-219	ENST00000588411	UGGT1	Q9NYU2	1555 aa		33.5	■■■□□ 2.95
CIRBP-219	ENST00000588411	ANKLE2	Q86XL3	938 aa		33.47	■■■□□ 2.95
CIRBP-219	ENST00000588411	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	33.46	■■■□□ 2.95	5e-6	■■■□□ 18.7
CIRBP-219	ENST00000588411	ANKRD50	Q9ULJ7	1429 aa		33.45	■■■□□ 2.94
CIRBP-219	ENST00000588411	LTBP4	Q8N2S1	1624 aa		33.44	■■■□□ 2.94
CIRBP-219	ENST00000588411	PPARGC1B	Q86YN6	1023 aa	Known RBP	33.42	■■■□□ 2.94
CIRBP-219	ENST00000588411	LMTK2	Q8IWU2	1503 aa		33.41	■■■□□ 2.94
CIRBP-219	ENST00000588411	POLR1A	O95602	1720 aa	Predicted RBP	33.39	■■■□□ 2.94
CIRBP-219	ENST00000588411	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.39	■■■□□ 2.94
CIRBP-219	ENST00000588411	IQSEC2	Q5JU85	1478 aa		33.38	■■■□□ 2.93
CIRBP-219	ENST00000588411	VWDE	Q8N2E2	1590 aa		33.38	■■■□□ 2.93
CIRBP-219	ENST00000588411	ROCK1	Q13464	1354 aa		33.37	■■■□□ 2.93
CIRBP-219	ENST00000588411	NEURL4	Q96JN8	1562 aa		33.34	■■■□□ 2.93
CIRBP-219	ENST00000588411	CFAP65	Q6ZU64	1925 aa	Known RBP	33.34	■■■□□ 2.93
CIRBP-219	ENST00000588411	NPHP4	O75161	1426 aa	Predicted RBP	33.31	■■■□□ 2.92
CIRBP-219	ENST00000588411	MED14	O60244	1454 aa		33.31	■■■□□ 2.92
CIRBP-219	ENST00000588411	ITGAE	P38570	1179 aa		33.3	■■■□□ 2.92
CIRBP-219	ENST00000588411	EFCAB6	Q5THR3	1501 aa		33.29	■■■□□ 2.92
CIRBP-219	ENST00000588411	STAG3	Q9UJ98	1225 aa		33.27	■■■□□ 2.92
CIRBP-219	ENST00000588411	UBR1	Q8IWV7	1749 aa		33.27	■■■□□ 2.92
CIRBP-219	ENST00000588411	RPRD2	Q5VT52	1461 aa	Known RBP	33.24	■■■□□ 2.91
CIRBP-219	ENST00000588411	NOS1	P29475	1434 aa		33.21	■■■□□ 2.91
CIRBP-219	ENST00000588411	SCAF11	Q99590	1463 aa	Known RBP	33.21	■■■□□ 2.91
CIRBP-219	ENST00000588411	EID1	Q9Y6B2	187 aa		33.21	■■■□□ 2.91
CIRBP-219	ENST00000588411	IQGAP1	P46940	1657 aa		33.2	■■■□□ 2.91
CIRBP-219	ENST00000588411	CPS1	P31327	1500 aa		33.2	■■■□□ 2.91
CIRBP-219	ENST00000588411	UNC13B	O14795	1591 aa		33.2	■■■□□ 2.91
CIRBP-219	ENST00000588411	SLIT1	O75093	1534 aa		33.19	■■■□□ 2.9
CIRBP-219	ENST00000588411	IDI1	Q13907	227 aa		33.19	■■■□□ 2.9
CIRBP-219	ENST00000588411	TXNDC2	Q86VQ3	553 aa		33.19	■■■□□ 2.9
CIRBP-219	ENST00000588411	SLC52A1	Q9NWF4	448 aa		33.19	■■■□□ 2.9
CIRBP-219	ENST00000588411	ARHGAP23	Q9P227	1491 aa		33.18	■■■□□ 2.9
CIRBP-219	ENST00000588411	PIK3C2B	O00750	1634 aa		33.18	■■■□□ 2.9
CIRBP-219	ENST00000588411	RRBP1	Q9P2E9	1410 aa	Known RBP	33.18	■■■□□ 2.9
CIRBP-219	ENST00000588411	TET3	O43151	1660 aa		33.17	■■■□□ 2.9
CIRBP-219	ENST00000588411	SYNM	O15061	1565 aa		33.16	■■■□□ 2.9
CIRBP-219	ENST00000588411	TMEM2	Q9UHN6	1383 aa		33.15	■■■□□ 2.9
CIRBP-219	ENST00000588411	KDM5A	P29375	1690 aa	Known RBP	33.13	■■■□□ 2.89
CIRBP-219	ENST00000588411	UBAP1L	F5GYI3	381 aa		33.12	■■■□□ 2.89
CIRBP-219	ENST00000588411	LTK	P29376	864 aa		33.12	■■■□□ 2.89
CIRBP-219	ENST00000588411	NUP155	O75694	1391 aa		33.1	■■■□□ 2.89
CIRBP-219	ENST00000588411	GCC2	Q8IWJ2	1684 aa		33.1	■■■□□ 2.89
CIRBP-219	ENST00000588411	ADGRB3	O60242	1522 aa		33.08	■■■□□ 2.89
CIRBP-219	ENST00000588411	IQGAP3	Q86VI3	1631 aa		33.07	■■■□□ 2.88
CIRBP-219	ENST00000588411	TOM1	O60784	492 aa		32.99	■■■□□ 2.87
CIRBP-219	ENST00000588411	HDGF	P51858	240 aa	Known RBP	32.98	■■■□□ 2.87
CIRBP-219	ENST00000588411		E9PCH4	1651 aa		32.97	■■■□□ 2.87
CIRBP-219	ENST00000588411	CHGA	P10645	457 aa	Known RBP	32.93	■■■□□ 2.86
CIRBP-219	ENST00000588411	NAIP	Q13075	1403 aa		32.93	■■■□□ 2.86
CIRBP-219	ENST00000588411	BCAN	Q96GW7	911 aa		32.92	■■■□□ 2.86
CIRBP-219	ENST00000588411	PPP1R15A	O75807	674 aa	Predicted RBP	32.91	■■■□□ 2.86
CIRBP-219	ENST00000588411	SCAF1	Q9H7N4	1312 aa	Known RBP	32.91	■■■□□ 2.86
CIRBP-219	ENST00000588411	LRRC7	Q96NW7	1537 aa		32.91	■■■□□ 2.86
CIRBP-219	ENST00000588411	TMEM131L	A2VDJ0	1609 aa		32.88	■■■□□ 2.85
CIRBP-219	ENST00000588411	RIMS2	Q9UQ26	1411 aa		32.88	■■■□□ 2.85
CIRBP-219	ENST00000588411	STRCP1	A6NGW2	1772 aa		32.88	■■■□□ 2.85
CIRBP-219	ENST00000588411	ZFYVE9	O95405	1425 aa		32.87	■■■□□ 2.85

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