RNA–Protein interactions for RNA: ENST00000588300.1

ERCC1-206, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 1,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-206ENST00000588300 TSPY10P0CW01 314 aa25.23■■□□□ 1.63
ERCC1-206ENST00000588300 NCKAP5LQ9HCH0 1330 aa25.21■■□□□ 1.63
ERCC1-206ENST00000588300 A2ML1A8K2U0 1454 aa25.21■■□□□ 1.63
ERCC1-206ENST00000588300 PKD2Q13563 968 aa25.2■■□□□ 1.62
ERCC1-206ENST00000588300 TCOF1Q13428 1488 aaKnown RBP25.2■■□□□ 1.62
ERCC1-206ENST00000588300 IQSEC2Q5JU85 1478 aa25.2■■□□□ 1.62
ERCC1-206ENST00000588300 MAST1Q9Y2H9 1570 aa25.19■■□□□ 1.62
ERCC1-206ENST00000588300 PZPP20742 1482 aa25.19■■□□□ 1.62
ERCC1-206ENST00000588300 DNMT1P26358 1616 aaKnown RBP25.18■■□□□ 1.62
ERCC1-206ENST00000588300 WASHC2CQ9Y4E1 1318 aa25.17■■□□□ 1.62
ERCC1-206ENST00000588300 KANK4Q5T7N3 995 aaPredicted RBP25.17■■□□□ 1.62
ERCC1-206ENST00000588300 MYOM3Q5VTT5 1437 aa25.16■■□□□ 1.62
ERCC1-206ENST00000588300 MIA2Q96PC5 1412 aa25.16■■□□□ 1.62
ERCC1-206ENST00000588300 TNRQ92752 1358 aa25.16■■□□□ 1.62
ERCC1-206ENST00000588300 RNF17Q9BXT8 1623 aaKnown RBP25.14■■□□□ 1.61
ERCC1-206ENST00000588300 FBXO31Q5XUX0 539 aaPredicted RBP25.13■■□□□ 1.61
ERCC1-206ENST00000588300 EIF2AK4Q9P2K8 1649 aaKnown RBP25.12■■□□□ 1.61
ERCC1-206ENST00000588300 POLR1AO95602 1720 aaPredicted RBP25.11■■□□□ 1.61
ERCC1-206ENST00000588300 ZNF335Q9H4Z2 1342 aaPredicted RBP25.11■■□□□ 1.61
ERCC1-206ENST00000588300 ZC3H13Q5T200 1668 aaKnown RBP25.1■■□□□ 1.61
ERCC1-206ENST00000588300 NLRP1Q9C000 1473 aa25.07■■□□□ 1.6
ERCC1-206ENST00000588300 ABCC3O15438 1527 aa25.06■■□□□ 1.6
ERCC1-206ENST00000588300 APLP2Q06481 763 aa25.05■■□□□ 1.6
ERCC1-206ENST00000588300 NEURL4Q96JN8 1562 aa25.04■■□□□ 1.6
ERCC1-206ENST00000588300 CROCC2H7BZ55 1655 aa25.04■■□□□ 1.6
ERCC1-206ENST00000588300 DUOX2Q9NRD8 1548 aa25.03■■□□□ 1.6
ERCC1-206ENST00000588300 UGGT1Q9NYU2 1555 aa25.02■■□□□ 1.6
ERCC1-206ENST00000588300 MROH1Q8NDA8 1641 aa25.02■■□□□ 1.6
ERCC1-206ENST00000588300 PTPN23Q9H3S7 1636 aa25.02■■□□□ 1.6
ERCC1-206ENST00000588300 SHANK2Q9UPX8 1470 aa25.01■■□□□ 1.59
ERCC1-206ENST00000588300 SPATA31D1Q6ZQQ2 1576 aa25.01■■□□□ 1.59
ERCC1-206ENST00000588300 CEP152O94986 1710 aa25■■□□□ 1.59
ERCC1-206ENST00000588300 THEMISQ8N1K5 641 aaPredicted RBP25■■□□□ 1.59
ERCC1-206ENST00000588300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.99■■□□□ 1.597e-7■■■■■ 52.8
ERCC1-206ENST00000588300 ANKLE2Q86XL3 938 aa24.97■■□□□ 1.59
ERCC1-206ENST00000588300 ERVK-7P63135 1459 aa24.96■■□□□ 1.59
ERCC1-206ENST00000588300 ABCC5O15440 1437 aa24.96■■□□□ 1.59
ERCC1-206ENST00000588300 KIF15Q9NS87 1388 aa24.96■■□□□ 1.59
ERCC1-206ENST00000588300 DEPDC5O75140 1603 aa24.96■■□□□ 1.59
ERCC1-206ENST00000588300 UBAP1LF5GYI3 381 aa24.95■■□□□ 1.58
ERCC1-206ENST00000588300 ERBINQ96RT1 1412 aa24.95■■□□□ 1.58
ERCC1-206ENST00000588300 FGD6Q6ZV73 1430 aa24.94■■□□□ 1.58
ERCC1-206ENST00000588300 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
ERCC1-206ENST00000588300 CPS1P31327 1500 aa24.93■■□□□ 1.58
ERCC1-206ENST00000588300 PRDM15P57071 1507 aaPredicted RBP24.93■■□□□ 1.58
ERCC1-206ENST00000588300 DAPK1P53355 1430 aa24.93■■□□□ 1.58
ERCC1-206ENST00000588300 MED14O60244 1454 aa24.92■■□□□ 1.58
ERCC1-206ENST00000588300 CFAP65Q6ZU64 1925 aaKnown RBP24.91■■□□□ 1.58
ERCC1-206ENST00000588300 NPHP4O75161 1426 aaPredicted RBP24.91■■□□□ 1.58
ERCC1-206ENST00000588300 IQGAP1P46940 1657 aa24.9■■□□□ 1.58
ERCC1-206ENST00000588300 RRP7BPQ9NSQ0 103 aa24.89■■□□□ 1.58
ERCC1-206ENST00000588300 VWDEQ8N2E2 1590 aa24.88■■□□□ 1.57
ERCC1-206ENST00000588300 UBR1Q8IWV7 1749 aa24.87■■□□□ 1.57
ERCC1-206ENST00000588300 ARHGAP31Q2M1Z3 1444 aa24.86■■□□□ 1.57
ERCC1-206ENST00000588300 ANKRD30AQ9BXX3 1397 aa24.83■■□□□ 1.57
ERCC1-206ENST00000588300 KANK1Q14678 1352 aa24.82■■□□□ 1.56
ERCC1-206ENST00000588300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.81■■□□□ 1.56
ERCC1-206ENST00000588300 CHIC2Q9UKJ5 165 aa24.8■■□□□ 1.56
ERCC1-206ENST00000588300 TOM1O60784 492 aa24.78■■□□□ 1.56
ERCC1-206ENST00000588300 SCAF11Q99590 1463 aaKnown RBP24.77■■□□□ 1.56
ERCC1-206ENST00000588300 SLIT1O75093 1534 aa24.76■■□□□ 1.55
ERCC1-206ENST00000588300 LMTK2Q8IWU2 1503 aa24.76■■□□□ 1.55
ERCC1-206ENST00000588300 ILDR2Q71H61 639 aa24.76■■□□□ 1.55
ERCC1-206ENST00000588300 SCAF1Q9H7N4 1312 aaKnown RBP24.76■■□□□ 1.55
ERCC1-206ENST00000588300 ADGRL2O95490 1459 aa24.76■■□□□ 1.55
ERCC1-206ENST00000588300 ARHGAP23Q9P227 1491 aa24.76■■□□□ 1.55
ERCC1-206ENST00000588300 PIK3C2BO00750 1634 aa24.75■■□□□ 1.55
ERCC1-206ENST00000588300 STRCP1A6NGW2 1772 aa24.75■■□□□ 1.55
ERCC1-206ENST00000588300 SYNMO15061 1565 aa24.75■■□□□ 1.55
ERCC1-206ENST00000588300 PIP4K2BP78356 416 aa24.73■■□□□ 1.55
ERCC1-206ENST00000588300 KDM5AP29375 1690 aaKnown RBP24.72■■□□□ 1.55
ERCC1-206ENST00000588300 FAM50AQ14320 339 aaKnown RBP24.71■■□□□ 1.55
ERCC1-206ENST00000588300 TXNDC2Q86VQ3 553 aa24.7■■□□□ 1.54
ERCC1-206ENST00000588300 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
ERCC1-206ENST00000588300 LRRC7Q96NW7 1537 aa24.7■■□□□ 1.54
ERCC1-206ENST00000588300 LTKP29376 864 aa24.69■■□□□ 1.54
ERCC1-206ENST00000588300 EID1Q9Y6B2 187 aa24.69■■□□□ 1.54
ERCC1-206ENST00000588300 STAG3Q9UJ98 1225 aa24.68■■□□□ 1.54
ERCC1-206ENST00000588300 HSPA1LP34931 641 aa24.67■■□□□ 1.54
ERCC1-206ENST00000588300 ALKQ9UM73 1620 aa24.67■■□□□ 1.54
ERCC1-206ENST00000588300 TMEM2Q9UHN6 1383 aa24.67■■□□□ 1.54
ERCC1-206ENST00000588300 ANKRD50Q9ULJ7 1429 aa24.65■■□□□ 1.54
ERCC1-206ENST00000588300 NOS1P29475 1434 aa24.64■■□□□ 1.54
ERCC1-206ENST00000588300 SOCS7O14512 581 aa24.63■■□□□ 1.53
ERCC1-206ENST00000588300 IDI1Q13907 227 aa24.63■■□□□ 1.53
ERCC1-206ENST00000588300 ADGRB3O60242 1522 aa24.61■■□□□ 1.53
ERCC1-206ENST00000588300 RPRD2Q5VT52 1461 aaKnown RBP24.6■■□□□ 1.53
ERCC1-206ENST00000588300 TET3O43151 1660 aa24.59■■□□□ 1.53
ERCC1-206ENST00000588300 MED1Q15648 1581 aaPredicted RBP24.58■■□□□ 1.52
ERCC1-206ENST00000588300 XIRP1Q702N8 1843 aaKnown RBP24.57■■□□□ 1.52
ERCC1-206ENST00000588300 SLC52A1Q9NWF4 448 aa24.57■■□□□ 1.52
ERCC1-206ENST00000588300 UNC13BO14795 1591 aa24.56■■□□□ 1.52
ERCC1-206ENST00000588300 GCC2Q8IWJ2 1684 aa24.56■■□□□ 1.52
ERCC1-206ENST00000588300 ROCK1Q13464 1354 aa24.51■■□□□ 1.51
ERCC1-206ENST00000588300 MYO5BQ9ULV0 1848 aa24.5■■□□□ 1.51
ERCC1-206ENST00000588300 SLC26A8Q96RN1 970 aa24.48■■□□□ 1.51
ERCC1-206ENST00000588300 KCNA6P17658 529 aa24.47■■□□□ 1.51
ERCC1-206ENST00000588300 E9PCH4 1651 aa24.46■■□□□ 1.51
ERCC1-206ENST00000588300 IQGAP3Q86VI3 1631 aa24.46■■□□□ 1.51
ERCC1-206ENST00000588300 SENP3Q9H4L4 574 aaPredicted RBP24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms