RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 PTPN23Q9H3S7 1636 aa18.18■□□□□ 0.5
PRKCSH-207ENST00000588269 SHANK2Q9UPX8 1470 aa18.17■□□□□ 0.5
PRKCSH-207ENST00000588269 NPATQ14207 1427 aa18.16■□□□□ 0.5
PRKCSH-207ENST00000588269 ZNF335Q9H4Z2 1342 aaPredicted RBP18.16■□□□□ 0.5
PRKCSH-207ENST00000588269 PTPRKQ15262 1439 aa18.15■□□□□ 0.5
PRKCSH-207ENST00000588269 FAM135AQ9P2D6 1515 aa18.15■□□□□ 0.5
PRKCSH-207ENST00000588269 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
PRKCSH-207ENST00000588269 TCOF1Q13428 1488 aaKnown RBP18.14■□□□□ 0.5
PRKCSH-207ENST00000588269 PPP6R1Q9UPN7 881 aa18.13■□□□□ 0.49
PRKCSH-207ENST00000588269 CEP170BQ9Y4F5 1589 aaPredicted RBP18.13■□□□□ 0.49
PRKCSH-207ENST00000588269 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
PRKCSH-207ENST00000588269 ZNF142P52746 1687 aaPredicted RBP18.12■□□□□ 0.49
PRKCSH-207ENST00000588269 DNMT1P26358 1616 aaKnown RBP18.1■□□□□ 0.49
PRKCSH-207ENST00000588269 EIF2AK4Q9P2K8 1649 aaKnown RBP18.09■□□□□ 0.49
PRKCSH-207ENST00000588269 SPATA31D1Q6ZQQ2 1576 aa18.08■□□□□ 0.49
PRKCSH-207ENST00000588269 DAPK1P53355 1430 aa18.08■□□□□ 0.49
PRKCSH-207ENST00000588269 KDM5DQ9BY66 1539 aa18.08■□□□□ 0.48
PRKCSH-207ENST00000588269 DUOX2Q9NRD8 1548 aa18.08■□□□□ 0.48
PRKCSH-207ENST00000588269 FBXO31Q5XUX0 539 aaPredicted RBP18.07■□□□□ 0.48
PRKCSH-207ENST00000588269 ABCC5O15440 1437 aa18.06■□□□□ 0.48
PRKCSH-207ENST00000588269 KIF3BO15066 747 aa18.05■□□□□ 0.48
PRKCSH-207ENST00000588269 PLA2R1Q13018 1463 aa18.05■□□□□ 0.48
PRKCSH-207ENST00000588269 ERBINQ96RT1 1412 aa18.05■□□□□ 0.48
PRKCSH-207ENST00000588269 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
PRKCSH-207ENST00000588269 KIF15Q9NS87 1388 aa18.04■□□□□ 0.48
PRKCSH-207ENST00000588269 RNF17Q9BXT8 1623 aaKnown RBP18.04■□□□□ 0.48
PRKCSH-207ENST00000588269 IQSEC2Q5JU85 1478 aa18.03■□□□□ 0.48
PRKCSH-207ENST00000588269 UBAP1LF5GYI3 381 aa18.03■□□□□ 0.48
PRKCSH-207ENST00000588269 FAM50AQ14320 339 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-207ENST00000588269 ZC3H13Q5T200 1668 aaKnown RBP18.03■□□□□ 0.48
PRKCSH-207ENST00000588269 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
PRKCSH-207ENST00000588269 PKD2Q13563 968 aa18.01■□□□□ 0.47
PRKCSH-207ENST00000588269 WASHC2CQ9Y4E1 1318 aa17.99■□□□□ 0.47
PRKCSH-207ENST00000588269 TNRQ92752 1358 aa17.99■□□□□ 0.47
PRKCSH-207ENST00000588269 NEURL4Q96JN8 1562 aa17.99■□□□□ 0.47
PRKCSH-207ENST00000588269 SOCS7O14512 581 aa17.98■□□□□ 0.47
PRKCSH-207ENST00000588269 ADGRL2O95490 1459 aa17.98■□□□□ 0.47
PRKCSH-207ENST00000588269 POLR1AO95602 1720 aaPredicted RBP17.97■□□□□ 0.47
PRKCSH-207ENST00000588269 PZPP20742 1482 aa17.96■□□□□ 0.47
PRKCSH-207ENST00000588269 PRDM15P57071 1507 aaPredicted RBP17.96■□□□□ 0.47
PRKCSH-207ENST00000588269 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.95■□□□□ 0.46
PRKCSH-207ENST00000588269 KANK1Q14678 1352 aa17.94■□□□□ 0.46
PRKCSH-207ENST00000588269 RRP7BPQ9NSQ0 103 aa17.94■□□□□ 0.46
PRKCSH-207ENST00000588269 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
PRKCSH-207ENST00000588269 ABCC3O15438 1527 aa17.93■□□□□ 0.46
PRKCSH-207ENST00000588269 PIP4K2BP78356 416 aa17.92■□□□□ 0.46
PRKCSH-207ENST00000588269 DEPDC5O75140 1603 aa17.91■□□□□ 0.46
PRKCSH-207ENST00000588269 CHIC2Q9UKJ5 165 aa17.91■□□□□ 0.46
PRKCSH-207ENST00000588269 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
PRKCSH-207ENST00000588269 ROCK1Q13464 1354 aa17.9■□□□□ 0.46
PRKCSH-207ENST00000588269 CFAP65Q6ZU64 1925 aaKnown RBP17.88■□□□□ 0.45
PRKCSH-207ENST00000588269 VWDEQ8N2E2 1590 aa17.88■□□□□ 0.45
PRKCSH-207ENST00000588269 HSPA1LP34931 641 aa17.88■□□□□ 0.45
PRKCSH-207ENST00000588269 ANKRD50Q9ULJ7 1429 aa17.88■□□□□ 0.45
PRKCSH-207ENST00000588269 NLRP1Q9C000 1473 aa17.88■□□□□ 0.45
PRKCSH-207ENST00000588269 UGGT1Q9NYU2 1555 aa17.87■□□□□ 0.45
PRKCSH-207ENST00000588269 SENP3Q9H4L4 574 aaPredicted RBP17.87■□□□□ 0.45
PRKCSH-207ENST00000588269 CEP152O94986 1710 aa17.86■□□□□ 0.45
PRKCSH-207ENST00000588269 RRBP1Q9P2E9 1410 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-207ENST00000588269 STRCP1A6NGW2 1772 aa17.85■□□□□ 0.45
PRKCSH-207ENST00000588269 NPHP4O75161 1426 aaPredicted RBP17.85■□□□□ 0.45
PRKCSH-207ENST00000588269 ANKLE2Q86XL3 938 aa17.85■□□□□ 0.45
PRKCSH-207ENST00000588269 PPARGC1BQ86YN6 1023 aaKnown RBP17.85■□□□□ 0.45
PRKCSH-207ENST00000588269 ALKQ9UM73 1620 aa17.84■□□□□ 0.45
PRKCSH-207ENST00000588269 CPS1P31327 1500 aa17.84■□□□□ 0.45
PRKCSH-207ENST00000588269 ARHGAP31Q2M1Z3 1444 aa17.84■□□□□ 0.45
PRKCSH-207ENST00000588269 LMTK2Q8IWU2 1503 aa17.83■□□□□ 0.45
PRKCSH-207ENST00000588269 ERVK-7P63135 1459 aa17.83■□□□□ 0.45
PRKCSH-207ENST00000588269 IQGAP1P46940 1657 aa17.83■□□□□ 0.44
PRKCSH-207ENST00000588269 THEMISQ8N1K5 641 aaPredicted RBP17.82■□□□□ 0.44
PRKCSH-207ENST00000588269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.449e-11■□□□□ 8.5
PRKCSH-207ENST00000588269 MED1Q15648 1581 aaPredicted RBP17.82■□□□□ 0.44
PRKCSH-207ENST00000588269 MED14O60244 1454 aa17.8■□□□□ 0.44
PRKCSH-207ENST00000588269 EFCAB6Q5THR3 1501 aa17.79■□□□□ 0.44
PRKCSH-207ENST00000588269 TOM1O60784 492 aa17.79■□□□□ 0.44
PRKCSH-207ENST00000588269 ITGAEP38570 1179 aa17.79■□□□□ 0.44
PRKCSH-207ENST00000588269 UNC13BO14795 1591 aa17.79■□□□□ 0.44
PRKCSH-207ENST00000588269 RPRD2Q5VT52 1461 aaKnown RBP17.77■□□□□ 0.44
PRKCSH-207ENST00000588269 UBR1Q8IWV7 1749 aa17.77■□□□□ 0.44
PRKCSH-207ENST00000588269 LRRC7Q96NW7 1537 aa17.75■□□□□ 0.43
PRKCSH-207ENST00000588269 TET3O43151 1660 aa17.74■□□□□ 0.43
PRKCSH-207ENST00000588269 LTKP29376 864 aa17.73■□□□□ 0.43
PRKCSH-207ENST00000588269 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
PRKCSH-207ENST00000588269 IQGAP3Q86VI3 1631 aa17.71■□□□□ 0.43
PRKCSH-207ENST00000588269 SCAF11Q99590 1463 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-207ENST00000588269 TXNDC2Q86VQ3 553 aa17.69■□□□□ 0.42
PRKCSH-207ENST00000588269 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
PRKCSH-207ENST00000588269 XIRP1Q702N8 1843 aaKnown RBP17.68■□□□□ 0.42
PRKCSH-207ENST00000588269 SYNMO15061 1565 aa17.68■□□□□ 0.42
PRKCSH-207ENST00000588269 STAG3Q9UJ98 1225 aa17.68■□□□□ 0.42
PRKCSH-207ENST00000588269 KDM5AP29375 1690 aaKnown RBP17.67■□□□□ 0.42
PRKCSH-207ENST00000588269 NUP155O75694 1391 aa17.67■□□□□ 0.42
PRKCSH-207ENST00000588269 HFM1A2PYH4 1435 aa17.67■□□□□ 0.42
PRKCSH-207ENST00000588269 ARHGAP23Q9P227 1491 aa17.67■□□□□ 0.42
PRKCSH-207ENST00000588269 NOS1P29475 1434 aa17.66■□□□□ 0.42
PRKCSH-207ENST00000588269 SLIT1O75093 1534 aa17.66■□□□□ 0.42
PRKCSH-207ENST00000588269 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
PRKCSH-207ENST00000588269 SLC52A1Q9NWF4 448 aa17.65■□□□□ 0.42
PRKCSH-207ENST00000588269 NAIPQ13075 1403 aa17.64■□□□□ 0.42
PRKCSH-207ENST00000588269 ADGRB3O60242 1522 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms