RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 COL17A1Q9UMD9 1497 aaPredicted RBP32.33■■■□□ 2.77
RBM42-203ENST00000588161 DIP2CQ9Y2E4 1556 aa32.31■■■□□ 2.76
RBM42-203ENST00000588161 YEATS2Q9ULM3 1422 aa32.28■■■□□ 2.76
RBM42-203ENST00000588161 DEPDC5O75140 1603 aa32.26■■■□□ 2.76
RBM42-203ENST00000588161 KIF3BO15066 747 aa32.26■■■□□ 2.76
RBM42-203ENST00000588161 FAM135AQ9P2D6 1515 aa32.26■■■□□ 2.76
RBM42-203ENST00000588161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.26■■■□□ 2.75
RBM42-203ENST00000588161 IQGAP3Q86VI3 1631 aa32.25■■■□□ 2.75
RBM42-203ENST00000588161 PKD2Q13563 968 aa32.22■■■□□ 2.75
RBM42-203ENST00000588161 BCORL1Q5H9F3 1711 aa32.21■■■□□ 2.75
RBM42-203ENST00000588161 ATP10AO60312 1499 aa32.2■■■□□ 2.75
RBM42-203ENST00000588161 SIN3AQ96ST3 1273 aa32.19■■■□□ 2.74
RBM42-203ENST00000588161 ANKRD30BQ9BXX2 1392 aa32.19■■■□□ 2.74
RBM42-203ENST00000588161 FOXD1Q16676 465 aa32.18■■■□□ 2.74
RBM42-203ENST00000588161 KANK1Q14678 1352 aa32.18■■■□□ 2.74
RBM42-203ENST00000588161 RNF17Q9BXT8 1623 aaKnown RBP32.17■■■□□ 2.74
RBM42-203ENST00000588161 PRDM15P57071 1507 aaPredicted RBP32.17■■■□□ 2.74
RBM42-203ENST00000588161 REREQ9P2R6 1566 aa32.16■■■□□ 2.74
RBM42-203ENST00000588161 VWDEQ8N2E2 1590 aa32.15■■■□□ 2.74
RBM42-203ENST00000588161 MROH1Q8NDA8 1641 aa32.15■■■□□ 2.74
RBM42-203ENST00000588161 TIMELESSQ9UNS1 1208 aa32.14■■■□□ 2.74
RBM42-203ENST00000588161 NEUROD1Q13562 356 aa32.13■■■□□ 2.73
RBM42-203ENST00000588161 ARHGEF40Q8TER5 1519 aa32.12■■■□□ 2.73
RBM42-203ENST00000588161 AGLP35573 1532 aa32.07■■■□□ 2.72
RBM42-203ENST00000588161 GGT6Q6P531 493 aa32.05■■■□□ 2.72
RBM42-203ENST00000588161 TET3O43151 1660 aa32.04■■■□□ 2.72
RBM42-203ENST00000588161 LMTK2Q8IWU2 1503 aa32.04■■■□□ 2.72
RBM42-203ENST00000588161 RPRD2Q5VT52 1461 aaKnown RBP32.01■■■□□ 2.72
RBM42-203ENST00000588161 TONSLQ96HA7 1378 aa31.99■■■□□ 2.71
RBM42-203ENST00000588161 E9PCH4 1651 aa31.96■■■□□ 2.71
RBM42-203ENST00000588161 WASHC2CQ9Y4E1 1318 aa31.95■■■□□ 2.71
RBM42-203ENST00000588161 ABCC3O15438 1527 aa31.94■■■□□ 2.7
RBM42-203ENST00000588161 EFCAB6Q5THR3 1501 aa31.94■■■□□ 2.7
RBM42-203ENST00000588161 PPP6R1Q9UPN7 881 aa31.93■■■□□ 2.7
RBM42-203ENST00000588161 CEP152O94986 1710 aa31.93■■■□□ 2.7
RBM42-203ENST00000588161 PLA2R1Q13018 1463 aa31.93■■■□□ 2.7
RBM42-203ENST00000588161 ZC3H13Q5T200 1668 aaKnown RBP31.9■■■□□ 2.7
RBM42-203ENST00000588161 SIGLEC1Q9BZZ2 1709 aa31.9■■■□□ 2.7
RBM42-203ENST00000588161 PTPRTO14522 1441 aa31.89■■■□□ 2.7
RBM42-203ENST00000588161 CCDC144AA2RUR9 1427 aa31.88■■■□□ 2.69
RBM42-203ENST00000588161 PPP1R15AO75807 674 aaPredicted RBP31.85■■■□□ 2.69
RBM42-203ENST00000588161 TRPM2O94759 1503 aa31.84■■■□□ 2.69
RBM42-203ENST00000588161 CAMSAP1Q5T5Y3 1602 aa31.83■■■□□ 2.69
RBM42-203ENST00000588161 SPHKAPQ2M3C7 1700 aa31.83■■■□□ 2.69
RBM42-203ENST00000588161 ARHGAP31Q2M1Z3 1444 aa31.82■■■□□ 2.68
RBM42-203ENST00000588161 NPATQ14207 1427 aa31.82■■■□□ 2.68
RBM42-203ENST00000588161 L3MBTL2Q969R5 705 aa31.8■■■□□ 2.68
RBM42-203ENST00000588161 ARID4BQ4LE39 1312 aaPredicted RBP31.78■■■□□ 2.68
RBM42-203ENST00000588161 MLECQ14165 292 aa31.75■■■□□ 2.67
RBM42-203ENST00000588161 CNTLNQ9NXG0 1405 aa31.72■■■□□ 2.67
RBM42-203ENST00000588161 NOS1P29475 1434 aa31.7■■■□□ 2.66
RBM42-203ENST00000588161 CLTCL1P53675 1640 aa31.69■■■□□ 2.66
RBM42-203ENST00000588161 CLTCQ00610 1675 aaKnown RBP31.68■■■□□ 2.66
RBM42-203ENST00000588161 ESF1Q9H501 851 aaKnown RBP31.67■■■□□ 2.66
RBM42-203ENST00000588161 SPATA31E1Q6ZUB1 1445 aa31.64■■■□□ 2.66
RBM42-203ENST00000588161 NEURL4Q96JN8 1562 aa31.62■■■□□ 2.65
RBM42-203ENST00000588161 CFAP65Q6ZU64 1925 aaKnown RBP31.61■■■□□ 2.65
RBM42-203ENST00000588161 PREX1Q8TCU6 1659 aa31.59■■■□□ 2.65
RBM42-203ENST00000588161 UGGT1Q9NYU2 1555 aa31.59■■■□□ 2.65
RBM42-203ENST00000588161 RGL3Q3MIN7 710 aa31.59■■■□□ 2.65
RBM42-203ENST00000588161 SYNMO15061 1565 aa31.58■■■□□ 2.65
RBM42-203ENST00000588161 ZMYM3Q14202 1370 aa31.58■■■□□ 2.65
RBM42-203ENST00000588161 DCAF11Q8TEB1 546 aa31.57■■■□□ 2.64
RBM42-203ENST00000588161 ERVK-7P63135 1459 aa31.56■■■□□ 2.64
RBM42-203ENST00000588161 SLC52A1Q9NWF4 448 aa31.56■■■□□ 2.64
RBM42-203ENST00000588161 PIK3C2BO00750 1634 aa31.55■■■□□ 2.64
RBM42-203ENST00000588161 UHRF1BP1Q6BDS2 1440 aa31.55■■■□□ 2.64
RBM42-203ENST00000588161 KIF1BO60333 1816 aa31.54■■■□□ 2.64
RBM42-203ENST00000588161 MROH2AA6NES4 1674 aa31.53■■■□□ 2.64
RBM42-203ENST00000588161 NBPF8Q3BBV2 869 aa31.53■■■□□ 2.64
RBM42-203ENST00000588161 FBXO31Q5XUX0 539 aaPredicted RBP31.53■■■□□ 2.64
RBM42-203ENST00000588161 STAC3Q96MF2 364 aa31.52■■■□□ 2.64
RBM42-203ENST00000588161 SPATA31D1Q6ZQQ2 1576 aa31.52■■■□□ 2.64
RBM42-203ENST00000588161 KDM2AQ9Y2K7 1162 aa31.49■■■□□ 2.63
RBM42-203ENST00000588161 ADGRB3O60242 1522 aa31.49■■■□□ 2.63
RBM42-203ENST00000588161 ZNF316A6NFI3 1004 aaPredicted RBP31.48■■■□□ 2.63
RBM42-203ENST00000588161 IDI1Q13907 227 aa31.47■■■□□ 2.63
RBM42-203ENST00000588161 FER1L4A9Z1Z3 1794 aa31.45■■■□□ 2.62
RBM42-203ENST00000588161 ZNF326Q5BKZ1 582 aaKnown RBP31.43■■■□□ 2.62
RBM42-203ENST00000588161 PRAG1Q86YV5 1406 aa31.43■■■□□ 2.62
RBM42-203ENST00000588161 CHGAP10645 457 aaKnown RBP31.42■■■□□ 2.62
RBM42-203ENST00000588161 RPGRIP1LQ68CZ1 1315 aa31.39■■■□□ 2.62
RBM42-203ENST00000588161 RALGAPBQ86X10 1494 aa31.38■■■□□ 2.61
RBM42-203ENST00000588161 TNRQ92752 1358 aa31.36■■■□□ 2.61
RBM42-203ENST00000588161 MYOM2P54296 1465 aa31.35■■■□□ 2.61
RBM42-203ENST00000588161 ADAMTSL3P82987 1691 aa31.34■■■□□ 2.61
RBM42-203ENST00000588161 TMEM131LA2VDJ0 1609 aa31.34■■■□□ 2.61
RBM42-203ENST00000588161 IFT172Q9UG01 1749 aa31.34■■■□□ 2.61
RBM42-203ENST00000588161 C3P01024 1663 aa31.34■■■□□ 2.61
RBM42-203ENST00000588161 MADDQ8WXG6 1647 aa31.32■■■□□ 2.6
RBM42-203ENST00000588161 CEBPAP49715 358 aaPredicted RBP31.3■■■□□ 2.6
RBM42-203ENST00000588161 TRPM1Q7Z4N2 1603 aa31.3■■■□□ 2.6
RBM42-203ENST00000588161 EIF4G2P78344 907 aaKnown RBP eCLIP31.28■■■□□ 2.6
RBM42-203ENST00000588161 PPLO60437 1756 aa31.28■■■□□ 2.6
RBM42-203ENST00000588161 STAG3Q9UJ98 1225 aa31.27■■■□□ 2.6
RBM42-203ENST00000588161 NRXN1Q9ULB1 1477 aa31.27■■■□□ 2.6
RBM42-203ENST00000588161 RIMS1Q86UR5 1692 aaKnown RBP31.25■■■□□ 2.59
RBM42-203ENST00000588161 NEXMIFQ5QGS0 1516 aa31.25■■■□□ 2.59
RBM42-203ENST00000588161 ROCK2O75116 1388 aaKnown RBP31.25■■■□□ 2.59
RBM42-203ENST00000588161 ADGRF5Q8IZF2 1346 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms