RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 A2MP01023 1474 aa16.73■□□□□ 0.27
VMP1-207ENST00000588131 TRIM52Q96A61 297 aa16.73■□□□□ 0.27
VMP1-207ENST00000588131 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
VMP1-207ENST00000588131 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
VMP1-207ENST00000588131 MAGI2Q86UL8 1455 aa16.72■□□□□ 0.27
VMP1-207ENST00000588131 KDM5DQ9BY66 1539 aa16.71■□□□□ 0.27
VMP1-207ENST00000588131 PZPP20742 1482 aa16.71■□□□□ 0.27
VMP1-207ENST00000588131 DEPDC5O75140 1603 aa16.69■□□□□ 0.26
VMP1-207ENST00000588131 ARHGEF40Q8TER5 1519 aa16.69■□□□□ 0.26
VMP1-207ENST00000588131 ACIN1Q9UKV3 1341 aaKnown RBP16.69■□□□□ 0.26
VMP1-207ENST00000588131 BCORL1Q5H9F3 1711 aa16.67■□□□□ 0.26
VMP1-207ENST00000588131 MROH1Q8NDA8 1641 aa16.67■□□□□ 0.26
VMP1-207ENST00000588131 NUP155O75694 1391 aa16.66■□□□□ 0.26
VMP1-207ENST00000588131 MPHOSPH9Q99550 1183 aa16.66■□□□□ 0.26
VMP1-207ENST00000588131 IQGAP3Q86VI3 1631 aa16.66■□□□□ 0.26
VMP1-207ENST00000588131 RNF17Q9BXT8 1623 aaKnown RBP16.66■□□□□ 0.26
VMP1-207ENST00000588131 ATP10AO60312 1499 aa16.66■□□□□ 0.26
VMP1-207ENST00000588131 REREQ9P2R6 1566 aa16.65■□□□□ 0.26
VMP1-207ENST00000588131 FAM135AQ9P2D6 1515 aa16.65■□□□□ 0.26
VMP1-207ENST00000588131 SIGLEC1Q9BZZ2 1709 aa16.65■□□□□ 0.26
VMP1-207ENST00000588131 KIF3BO15066 747 aa16.64■□□□□ 0.25
VMP1-207ENST00000588131 PRDM15P57071 1507 aaPredicted RBP16.64■□□□□ 0.25
VMP1-207ENST00000588131 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.258e-7■□□□□ 10.1
VMP1-207ENST00000588131 SLC4A1APQ9BWU0 796 aaKnown RBP16.62■□□□□ 0.25
VMP1-207ENST00000588131 VWDEQ8N2E2 1590 aa16.62■□□□□ 0.25
VMP1-207ENST00000588131 CLSPNQ9HAW4 1339 aa16.62■□□□□ 0.25
VMP1-207ENST00000588131 AGLP35573 1532 aa16.59■□□□□ 0.25
VMP1-207ENST00000588131 CEP152O94986 1710 aa16.57■□□□□ 0.24
VMP1-207ENST00000588131 PKD2Q13563 968 aa16.57■□□□□ 0.24
VMP1-207ENST00000588131 TET3O43151 1660 aa16.56■□□□□ 0.24
VMP1-207ENST00000588131 KANK1Q14678 1352 aa16.55■□□□□ 0.24
VMP1-207ENST00000588131 GGT6Q6P531 493 aa16.55■□□□□ 0.24
VMP1-207ENST00000588131 LMTK2Q8IWU2 1503 aa16.55■□□□□ 0.24
VMP1-207ENST00000588131 E9PCH4 1651 aa16.54■□□□□ 0.24
VMP1-207ENST00000588131 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
VMP1-207ENST00000588131 SIN3AQ96ST3 1273 aa16.54■□□□□ 0.24
VMP1-207ENST00000588131 ABCC3O15438 1527 aa16.54■□□□□ 0.24
VMP1-207ENST00000588131 ANKRD30BQ9BXX2 1392 aa16.53■□□□□ 0.24
VMP1-207ENST00000588131 ZC3H13Q5T200 1668 aaKnown RBP16.52■□□□□ 0.23
VMP1-207ENST00000588131 EFCAB6Q5THR3 1501 aa16.51■□□□□ 0.23
VMP1-207ENST00000588131 CAMSAP1Q5T5Y3 1602 aa16.5■□□□□ 0.23
VMP1-207ENST00000588131 NEUROD1Q13562 356 aa16.49■□□□□ 0.23
VMP1-207ENST00000588131 PLA2R1Q13018 1463 aa16.48■□□□□ 0.23
VMP1-207ENST00000588131 WASHC2CQ9Y4E1 1318 aa16.47■□□□□ 0.23
VMP1-207ENST00000588131 SPHKAPQ2M3C7 1700 aa16.46■□□□□ 0.23
VMP1-207ENST00000588131 MLECQ14165 292 aa16.46■□□□□ 0.23
VMP1-207ENST00000588131 CLTCQ00610 1675 aaKnown RBP16.46■□□□□ 0.23
VMP1-207ENST00000588131 RPRD2Q5VT52 1461 aaKnown RBP16.45■□□□□ 0.22
VMP1-207ENST00000588131 ARID4BQ4LE39 1312 aaPredicted RBP16.45■□□□□ 0.22
VMP1-207ENST00000588131 NPATQ14207 1427 aa16.44■□□□□ 0.22
VMP1-207ENST00000588131 TRPM2O94759 1503 aa16.43■□□□□ 0.22
VMP1-207ENST00000588131 PTPRTO14522 1441 aa16.43■□□□□ 0.22
VMP1-207ENST00000588131 ARHGAP31Q2M1Z3 1444 aa16.41■□□□□ 0.22
VMP1-207ENST00000588131 CLTCL1P53675 1640 aa16.41■□□□□ 0.22
VMP1-207ENST00000588131 TONSLQ96HA7 1378 aa16.39■□□□□ 0.21
VMP1-207ENST00000588131 CCDC144AA2RUR9 1427 aa16.39■□□□□ 0.21
VMP1-207ENST00000588131 PREX1Q8TCU6 1659 aa16.38■□□□□ 0.21
VMP1-207ENST00000588131 UGGT1Q9NYU2 1555 aa16.38■□□□□ 0.21
VMP1-207ENST00000588131 CFAP65Q6ZU64 1925 aaKnown RBP16.37■□□□□ 0.21
VMP1-207ENST00000588131 TIMELESSQ9UNS1 1208 aa16.37■□□□□ 0.21
VMP1-207ENST00000588131 SYNMO15061 1565 aa16.37■□□□□ 0.21
VMP1-207ENST00000588131 NOS1P29475 1434 aa16.36■□□□□ 0.21
VMP1-207ENST00000588131 FER1L4A9Z1Z3 1794 aa16.36■□□□□ 0.21
VMP1-207ENST00000588131 MROH2AA6NES4 1674 aa16.36■□□□□ 0.21
VMP1-207ENST00000588131 CNTLNQ9NXG0 1405 aa16.36■□□□□ 0.21
VMP1-207ENST00000588131 ERVK-7P63135 1459 aa16.34■□□□□ 0.21
VMP1-207ENST00000588131 L3MBTL2Q969R5 705 aa16.33■□□□□ 0.2
VMP1-207ENST00000588131 ESF1Q9H501 851 aaKnown RBP16.33■□□□□ 0.2
VMP1-207ENST00000588131 PIK3C2BO00750 1634 aa16.33■□□□□ 0.2
VMP1-207ENST00000588131 ZMYM3Q14202 1370 aa16.32■□□□□ 0.2
VMP1-207ENST00000588131 FBXO31Q5XUX0 539 aaPredicted RBP16.32■□□□□ 0.2
VMP1-207ENST00000588131 SPATA31D1Q6ZQQ2 1576 aa16.32■□□□□ 0.2
VMP1-207ENST00000588131 MADDQ8WXG6 1647 aa16.32■□□□□ 0.2
VMP1-207ENST00000588131 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
VMP1-207ENST00000588131 SPATA31E1Q6ZUB1 1445 aa16.3■□□□□ 0.2
VMP1-207ENST00000588131 PPP1R15AO75807 674 aaPredicted RBP16.3■□□□□ 0.2
VMP1-207ENST00000588131 KIF1BO60333 1816 aa16.3■□□□□ 0.2
VMP1-207ENST00000588131 C3P01024 1663 aa16.3■□□□□ 0.2
VMP1-207ENST00000588131 RIMS1Q86UR5 1692 aaKnown RBP16.29■□□□□ 0.2
VMP1-207ENST00000588131 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
VMP1-207ENST00000588131 ADGRB3O60242 1522 aa16.27■□□□□ 0.2
VMP1-207ENST00000588131 RGL3Q3MIN7 710 aa16.26■□□□□ 0.19
VMP1-207ENST00000588131 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
VMP1-207ENST00000588131 CEBPAP49715 358 aaPredicted RBP16.24■□□□□ 0.19
VMP1-207ENST00000588131 IDI1Q13907 227 aa16.23■□□□□ 0.19
VMP1-207ENST00000588131 IFT172Q9UG01 1749 aa16.22■□□□□ 0.19
VMP1-207ENST00000588131 MYO5BQ9ULV0 1848 aa16.22■□□□□ 0.19
VMP1-207ENST00000588131 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
VMP1-207ENST00000588131 DCAF11Q8TEB1 546 aa16.22■□□□□ 0.19
VMP1-207ENST00000588131 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
VMP1-207ENST00000588131 TMEM131LA2VDJ0 1609 aa16.22■□□□□ 0.19
VMP1-207ENST00000588131 TNRQ92752 1358 aa16.22■□□□□ 0.19
VMP1-207ENST00000588131 CHGAP10645 457 aaKnown RBP16.21■□□□□ 0.19
VMP1-207ENST00000588131 UHRF1BP1Q6BDS2 1440 aa16.2■□□□□ 0.18
VMP1-207ENST00000588131 KDM2AQ9Y2K7 1162 aa16.2■□□□□ 0.18
VMP1-207ENST00000588131 PPLO60437 1756 aa16.18■□□□□ 0.18
VMP1-207ENST00000588131 ZNF326Q5BKZ1 582 aaKnown RBP16.17■□□□□ 0.18
VMP1-207ENST00000588131 NEXMIFQ5QGS0 1516 aa16.17■□□□□ 0.18
VMP1-207ENST00000588131 PRAG1Q86YV5 1406 aa16.17■□□□□ 0.18
VMP1-207ENST00000588131 A2ML1A8K2U0 1454 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms