RNA–Protein interactions for RNA: ENST00000588036.5

RTN2-205, Transcript of reticulon 2, humanhuman

TSL 4

Gene RTN2, Length 546 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-205ENST00000588036 ADGBQ8N7X0 1667 aa17.48■□□□□ 0.39
RTN2-205ENST00000588036 MED14O60244 1454 aa17.46■□□□□ 0.39
RTN2-205ENST00000588036 NPHP4O75161 1426 aaPredicted RBP17.46■□□□□ 0.39
RTN2-205ENST00000588036 PZPP20742 1482 aa17.45■□□□□ 0.38
RTN2-205ENST00000588036 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.45■□□□□ 0.38
RTN2-205ENST00000588036 CFDP1Q9UEE9 299 aaPredicted RBP17.45■□□□□ 0.38
RTN2-205ENST00000588036 DEPDC5O75140 1603 aa17.44■□□□□ 0.38
RTN2-205ENST00000588036 FAM135AQ9P2D6 1515 aa17.44■□□□□ 0.38
RTN2-205ENST00000588036 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
RTN2-205ENST00000588036 FYCO1Q9BQS8 1478 aa17.44■□□□□ 0.38
RTN2-205ENST00000588036 FBXO31Q5XUX0 539 aaPredicted RBP17.43■□□□□ 0.38
RTN2-205ENST00000588036 RGS17Q9UGC6 210 aaPredicted RBP17.43■□□□□ 0.38
RTN2-205ENST00000588036 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
RTN2-205ENST00000588036 RNF17Q9BXT8 1623 aaKnown RBP17.43■□□□□ 0.38
RTN2-205ENST00000588036 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
RTN2-205ENST00000588036 DHX29Q7Z478 1369 aaKnown RBP17.41■□□□□ 0.38
RTN2-205ENST00000588036 KDM5DQ9BY66 1539 aa17.41■□□□□ 0.38
RTN2-205ENST00000588036 CCNB3Q8WWL7 1395 aa17.4■□□□□ 0.38
RTN2-205ENST00000588036 SYNMO15061 1565 aa17.4■□□□□ 0.38
RTN2-205ENST00000588036 UGGT1Q9NYU2 1555 aa17.4■□□□□ 0.38
RTN2-205ENST00000588036 RTEL1-TNFRSF6BF6WH68 1400 aa17.4■□□□□ 0.38
RTN2-205ENST00000588036 MIA2Q96PC5 1412 aa17.4■□□□□ 0.38
RTN2-205ENST00000588036 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
RTN2-205ENST00000588036 IQGAP1P46940 1657 aa17.39■□□□□ 0.37
RTN2-205ENST00000588036 STRCP1A6NGW2 1772 aa17.37■□□□□ 0.37
RTN2-205ENST00000588036 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
RTN2-205ENST00000588036 KIF3BO15066 747 aa17.35■□□□□ 0.37
RTN2-205ENST00000588036 WASHC2CQ9Y4E1 1318 aa17.35■□□□□ 0.37
RTN2-205ENST00000588036 ZNF644Q9H582 1327 aaPredicted RBP17.32■□□□□ 0.36
RTN2-205ENST00000588036 POTEAQ6S8J7 498 aa17.31■□□□□ 0.36
RTN2-205ENST00000588036 MTUS2Q5JR59 1369 aa17.29■□□□□ 0.36
RTN2-205ENST00000588036 TIAM1Q13009 1591 aa17.29■□□□□ 0.36
RTN2-205ENST00000588036 ZC3H13Q5T200 1668 aaKnown RBP17.28■□□□□ 0.36
RTN2-205ENST00000588036 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
RTN2-205ENST00000588036 CCDC141Q6ZP82 1450 aa17.27■□□□□ 0.36
RTN2-205ENST00000588036 SCAF11Q99590 1463 aaKnown RBP17.24■□□□□ 0.35
RTN2-205ENST00000588036 ERVK-7P63135 1459 aa17.23■□□□□ 0.35
RTN2-205ENST00000588036 XIRP1Q702N8 1843 aaKnown RBP17.22■□□□□ 0.35
RTN2-205ENST00000588036 RSPH4AQ5TD94 716 aa17.22■□□□□ 0.35
RTN2-205ENST00000588036 ABCC3O15438 1527 aa17.21■□□□□ 0.35
RTN2-205ENST00000588036 EHBP1L1Q8N3D4 1523 aa17.21■□□□□ 0.35
RTN2-205ENST00000588036 CEP162Q5TB80 1403 aa17.21■□□□□ 0.34
RTN2-205ENST00000588036 ARHGAP23Q9P227 1491 aa17.19■□□□□ 0.34
RTN2-205ENST00000588036 UBR1Q8IWV7 1749 aa17.19■□□□□ 0.34
RTN2-205ENST00000588036 SETD1AO15047 1707 aaKnown RBP17.18■□□□□ 0.34
RTN2-205ENST00000588036 NCOA2Q15596 1464 aa17.18■□□□□ 0.34
RTN2-205ENST00000588036 SLIT1O75093 1534 aa17.18■□□□□ 0.34
RTN2-205ENST00000588036 LTKP29376 864 aa17.18■□□□□ 0.34
RTN2-205ENST00000588036 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
RTN2-205ENST00000588036 TXNDC2Q86VQ3 553 aa17.17■□□□□ 0.34
RTN2-205ENST00000588036 TMEM94Q12767 1356 aa17.15■□□□□ 0.34
RTN2-205ENST00000588036 ARHGEF5Q12774 1597 aa17.15■□□□□ 0.34
RTN2-205ENST00000588036 ROBO1Q9Y6N7 1651 aa17.15■□□□□ 0.34
RTN2-205ENST00000588036 LRRC9Q6ZRR7 1453 aa17.14■□□□□ 0.33
RTN2-205ENST00000588036 TSPY4P0CV99 314 aa17.13■□□□□ 0.33
RTN2-205ENST00000588036 TSPY10P0CW01 314 aa17.13■□□□□ 0.33
RTN2-205ENST00000588036 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
RTN2-205ENST00000588036 EIF2AK4Q9P2K8 1649 aaKnown RBP17.11■□□□□ 0.33
RTN2-205ENST00000588036 MAP3K1Q13233 1512 aa17.11■□□□□ 0.33
RTN2-205ENST00000588036 MROH1Q8NDA8 1641 aa17.1■□□□□ 0.33
RTN2-205ENST00000588036 CHIC1Q5VXU3 224 aa17.1■□□□□ 0.33
RTN2-205ENST00000588036 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
RTN2-205ENST00000588036 JCADQ9P266 1359 aa17.1■□□□□ 0.33
RTN2-205ENST00000588036 KCNA6P17658 529 aa17.09■□□□□ 0.33
RTN2-205ENST00000588036 SRCAPQ6ZRS2 3230 aa17.08■□□□□ 0.33
RTN2-205ENST00000588036 CFAP65Q6ZU64 1925 aaKnown RBP17.08■□□□□ 0.33
RTN2-205ENST00000588036 TMEM2Q9UHN6 1383 aa17.08■□□□□ 0.32
RTN2-205ENST00000588036 CEP152O94986 1710 aa17.07■□□□□ 0.32
RTN2-205ENST00000588036 MAST1Q9Y2H9 1570 aa17.07■□□□□ 0.32
RTN2-205ENST00000588036 ARHGAP31Q2M1Z3 1444 aa17.07■□□□□ 0.32
RTN2-205ENST00000588036 PROSER2Q86WR7 435 aaPredicted RBP17.06■□□□□ 0.32
RTN2-205ENST00000588036 PRDM15P57071 1507 aaPredicted RBP17.06■□□□□ 0.32
RTN2-205ENST00000588036 NKTRP30414 1462 aaKnown RBP17.05■□□□□ 0.32
RTN2-205ENST00000588036 PHLPP1O60346 1717 aa17.05■□□□□ 0.32
RTN2-205ENST00000588036 PIK3C2BO00750 1634 aa17.03■□□□□ 0.32
RTN2-205ENST00000588036 MSH6P52701 1360 aa17.03■□□□□ 0.32
RTN2-205ENST00000588036 ZNF772Q68DY9 489 aaPredicted RBP17.03■□□□□ 0.32
RTN2-205ENST00000588036 NWD1Q149M9 1564 aa17.02■□□□□ 0.32
RTN2-205ENST00000588036 TET3O43151 1660 aa17.02■□□□□ 0.32
RTN2-205ENST00000588036 SLAIN2Q9P270 581 aa17.02■□□□□ 0.32
RTN2-205ENST00000588036 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
RTN2-205ENST00000588036 FGD6Q6ZV73 1430 aa17.01■□□□□ 0.31
RTN2-205ENST00000588036 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
RTN2-205ENST00000588036 KDM5AP29375 1690 aaKnown RBP17.01■□□□□ 0.31
RTN2-205ENST00000588036 SPATA31A6Q5VVP1 1343 aa17■□□□□ 0.31
RTN2-205ENST00000588036 LRP6O75581 1613 aa17■□□□□ 0.31
RTN2-205ENST00000588036 COL16A1Q07092 1604 aaPredicted RBP17■□□□□ 0.31
RTN2-205ENST00000588036 TRIM52Q96A61 297 aa17■□□□□ 0.31
RTN2-205ENST00000588036 STAG3Q9UJ98 1225 aa17■□□□□ 0.31
RTN2-205ENST00000588036 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
RTN2-205ENST00000588036 DUOX2Q9NRD8 1548 aa16.99■□□□□ 0.31
RTN2-205ENST00000588036 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
RTN2-205ENST00000588036 CDK12Q9NYV4 1490 aaPredicted RBP16.96■□□□□ 0.31
RTN2-205ENST00000588036 RXRBP28702 533 aa16.94■□□□□ 0.3
RTN2-205ENST00000588036 IDI1Q13907 227 aa16.94■□□□□ 0.3
RTN2-205ENST00000588036 ERBINQ96RT1 1412 aa16.94■□□□□ 0.3
RTN2-205ENST00000588036 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
RTN2-205ENST00000588036 AHDC1Q5TGY3 1603 aaPredicted RBP16.92■□□□□ 0.3
RTN2-205ENST00000588036 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
RTN2-205ENST00000588036 KIF15Q9NS87 1388 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms