RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 ZNF467Q7Z7K2 595 aaPredicted RBP8.64□□□□□ -1.03
SDF2-206ENST00000587788 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
SDF2-206ENST00000587788 BCL11BQ9C0K0 894 aaPredicted RBP8.63□□□□□ -1.03
SDF2-206ENST00000587788 FRMPD1Q5SYB0 1578 aa8.63□□□□□ -1.03
SDF2-206ENST00000587788 RICTORQ6R327 1708 aa8.63□□□□□ -1.03
SDF2-206ENST00000587788 CCER1Q8TC90 406 aaPredicted RBP8.62□□□□□ -1.03
SDF2-206ENST00000587788 CCDC18Q5T9S5 1454 aa8.62□□□□□ -1.03
SDF2-206ENST00000587788 PREX2Q70Z35 1606 aa8.62□□□□□ -1.03
SDF2-206ENST00000587788 CFAP74Q9C0B2 1584 aa8.61□□□□□ -1.03
SDF2-206ENST00000587788 PLEKHD1A6NEE1 506 aa8.6□□□□□ -1.03
SDF2-206ENST00000587788 ZNF579Q8NAF0 562 aaKnown RBP8.6□□□□□ -1.03
SDF2-206ENST00000587788 STK24Q9Y6E0 443 aa8.6□□□□□ -1.03
SDF2-206ENST00000587788 TROQ12816 1431 aaPredicted RBP8.6□□□□□ -1.03
SDF2-206ENST00000587788 PDAP1Q13442 181 aaKnown RBP8.59□□□□□ -1.03
SDF2-206ENST00000587788 ARAP3Q8WWN8 1544 aa8.59□□□□□ -1.03
SDF2-206ENST00000587788 NEO1Q92859 1461 aa8.58□□□□□ -1.04
SDF2-206ENST00000587788 FANCAO15360 1455 aa8.57□□□□□ -1.04
SDF2-206ENST00000587788 TIAM1Q13009 1591 aa8.57□□□□□ -1.04
SDF2-206ENST00000587788 PCDHB8Q9UN66 801 aa8.57□□□□□ -1.04
SDF2-206ENST00000587788 PCDHB13Q9Y5F0 798 aa8.57□□□□□ -1.04
SDF2-206ENST00000587788 SIGLEC1Q9BZZ2 1709 aa8.57□□□□□ -1.04
SDF2-206ENST00000587788 ITSN2Q9NZM3 1697 aa8.56□□□□□ -1.04
SDF2-206ENST00000587788 PAK3O75914 559 aaPredicted RBP8.56□□□□□ -1.04
SDF2-206ENST00000587788 KIF12Q96FN5 646 aa8.56□□□□□ -1.04
SDF2-206ENST00000587788 BCANQ96GW7 911 aa8.56□□□□□ -1.04
SDF2-206ENST00000587788 PLCH2O75038 1416 aa8.55□□□□□ -1.04
SDF2-206ENST00000587788 ARHGAP5Q13017 1502 aa8.55□□□□□ -1.04
SDF2-206ENST00000587788 EHBP1L1Q8N3D4 1523 aa8.55□□□□□ -1.04
SDF2-206ENST00000587788 RYDENQ9NUL5 291 aaKnown RBP8.55□□□□□ -1.04
SDF2-206ENST00000587788 CDK11AQ9UQ88 783 aaPredicted RBP8.55□□□□□ -1.04
SDF2-206ENST00000587788 AKNAQ7Z591 1439 aa8.54□□□□□ -1.04
SDF2-206ENST00000587788 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
SDF2-206ENST00000587788 SUPT6HQ7KZ85 1726 aaKnown RBP8.54□□□□□ -1.04
SDF2-206ENST00000587788 SAMD9LQ8IVG5 1584 aa8.54□□□□□ -1.04
SDF2-206ENST00000587788 ZMYM4Q5VZL5 1548 aa8.54□□□□□ -1.04
SDF2-206ENST00000587788 IFNL1Q8IU54 200 aa8.53□□□□□ -1.04
SDF2-206ENST00000587788 ABCC1P33527 1531 aa8.53□□□□□ -1.04
SDF2-206ENST00000587788 ARHGEF40Q8TER5 1519 aa8.53□□□□□ -1.04
SDF2-206ENST00000587788 ADGRL1O94910 1474 aa8.52□□□□□ -1.05
SDF2-206ENST00000587788 MAP3K13O43283 966 aa8.52□□□□□ -1.05
SDF2-206ENST00000587788 RAPGEF3O95398 923 aa8.52□□□□□ -1.05
SDF2-206ENST00000587788 PSEN1P49768 467 aa8.52□□□□□ -1.05
SDF2-206ENST00000587788 DENND4BO75064 1496 aaPredicted RBP8.51□□□□□ -1.05
SDF2-206ENST00000587788 PHLDB1Q86UU1 1377 aa8.51□□□□□ -1.05
SDF2-206ENST00000587788 GPATCH8Q9UKJ3 1502 aaKnown RBP8.51□□□□□ -1.05
SDF2-206ENST00000587788 KDM5CP41229 1560 aa8.51□□□□□ -1.05
SDF2-206ENST00000587788 CLSPNQ9HAW4 1339 aa8.51□□□□□ -1.05
SDF2-206ENST00000587788 MTUS2Q5JR59 1369 aa8.5□□□□□ -1.05
SDF2-206ENST00000587788 ARHGEF12Q9NZN5 1544 aa8.5□□□□□ -1.05
SDF2-206ENST00000587788 CD44P16070 742 aaKnown RBP8.5□□□□□ -1.05
SDF2-206ENST00000587788 POGZQ7Z3K3 1410 aa8.5□□□□□ -1.05
SDF2-206ENST00000587788 SCAPERQ9BY12 1400 aa8.5□□□□□ -1.05
SDF2-206ENST00000587788 HECW2Q9P2P5 1572 aa8.5□□□□□ -1.05
SDF2-206ENST00000587788 ABCA6Q8N139 1617 aa8.5□□□□□ -1.05
SDF2-206ENST00000587788 SYCP2Q9BX26 1530 aa8.49□□□□□ -1.05
SDF2-206ENST00000587788 BCORL1Q5H9F3 1711 aa8.49□□□□□ -1.05
SDF2-206ENST00000587788 KIDINS220Q9ULH0 1771 aa8.49□□□□□ -1.05
SDF2-206ENST00000587788 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
SDF2-206ENST00000587788 NCOA2Q15596 1464 aa8.49□□□□□ -1.05
SDF2-206ENST00000587788 LRRC9Q6ZRR7 1453 aa8.49□□□□□ -1.05
SDF2-206ENST00000587788 ZFYVE16Q7Z3T8 1539 aa8.49□□□□□ -1.05
SDF2-206ENST00000587788 RRBP1Q9P2E9 1410 aaKnown RBP8.48□□□□□ -1.05
SDF2-206ENST00000587788 YEATS2Q9ULM3 1422 aa8.48□□□□□ -1.05
SDF2-206ENST00000587788 ZRANB1Q9UGI0 708 aa8.48□□□□□ -1.05
SDF2-206ENST00000587788 DIP2CQ9Y2E4 1556 aa8.48□□□□□ -1.05
SDF2-206ENST00000587788 TRAPPC8Q9Y2L5 1435 aa8.47□□□□□ -1.05
SDF2-206ENST00000587788 ADAMTSL3P82987 1691 aa8.47□□□□□ -1.05
SDF2-206ENST00000587788 KDM4FA0A1W2PPD8 638 aa8.47□□□□□ -1.05
SDF2-206ENST00000587788 C19orf67A6NJJ6 358 aa8.47□□□□□ -1.05
SDF2-206ENST00000587788 EFCAB2Q5VUJ9 269 aa8.47□□□□□ -1.05
SDF2-206ENST00000587788 MFRPQ9BY79 579 aa8.47□□□□□ -1.05
SDF2-206ENST00000587788 INO80Q9ULG1 1556 aaPredicted RBP8.47□□□□□ -1.05
SDF2-206ENST00000587788 ZNF518AQ6AHZ1 1483 aa8.46□□□□□ -1.05
SDF2-206ENST00000587788 PHF12Q96QT6 1004 aa8.46□□□□□ -1.06
SDF2-206ENST00000587788 MADDQ8WXG6 1647 aa8.46□□□□□ -1.06
SDF2-206ENST00000587788 ADGBQ8N7X0 1667 aa8.46□□□□□ -1.06
SDF2-206ENST00000587788 CCNB3Q8WWL7 1395 aa8.46□□□□□ -1.06
SDF2-206ENST00000587788 FER1L4A9Z1Z3 1794 aa8.45□□□□□ -1.06
SDF2-206ENST00000587788 RIMS1Q86UR5 1692 aaKnown RBP8.45□□□□□ -1.06
SDF2-206ENST00000587788 AFAP1Q8N556 730 aa8.44□□□□□ -1.06
SDF2-206ENST00000587788 ZNF644Q9H582 1327 aaPredicted RBP8.44□□□□□ -1.06
SDF2-206ENST00000587788 CAMSAP2Q08AD1 1489 aa8.44□□□□□ -1.06
SDF2-206ENST00000587788 MAGI2Q86UL8 1455 aa8.44□□□□□ -1.06
SDF2-206ENST00000587788 CROCC2H7BZ55 1655 aa8.43□□□□□ -1.06
SDF2-206ENST00000587788 FBXO22Q8NEZ5 403 aa8.43□□□□□ -1.06
SDF2-206ENST00000587788 ZNF777Q9ULD5 760 aaPredicted RBP8.43□□□□□ -1.06
SDF2-206ENST00000587788 ATP7AQ04656 1500 aa8.43□□□□□ -1.06
SDF2-206ENST00000587788 MBD5Q9P267 1494 aa8.42□□□□□ -1.06
SDF2-206ENST00000587788 MLH3Q9UHC1 1453 aa8.42□□□□□ -1.06
SDF2-206ENST00000587788 REREQ9P2R6 1566 aa8.42□□□□□ -1.06
SDF2-206ENST00000587788 ARHGEF5Q12774 1597 aa8.41□□□□□ -1.06
SDF2-206ENST00000587788 ATP10AO60312 1499 aa8.41□□□□□ -1.06
SDF2-206ENST00000587788 PLEKHH2Q8IVE3 1493 aa8.41□□□□□ -1.06
SDF2-206ENST00000587788 HNRNPMP52272 730 aaKnown RBP eCLIP8.41□□□□□ -1.06
SDF2-206ENST00000587788 EFCAB3Q8N7B9 438 aa8.41□□□□□ -1.06
SDF2-206ENST00000587788 CFDP1Q9UEE9 299 aaPredicted RBP8.41□□□□□ -1.06
SDF2-206ENST00000587788 PTPN23Q9H3S7 1636 aa8.4□□□□□ -1.06
SDF2-206ENST00000587788 PLXNC1O60486 1568 aa8.4□□□□□ -1.06
SDF2-206ENST00000587788 MYOM3Q5VTT5 1437 aa8.4□□□□□ -1.06
SDF2-206ENST00000587788 C9orf84Q5VXU9 1444 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms