RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 CROCC2H7BZ55 1655 aa13.22□□□□□ -0.29
CTDP1-204ENST00000587623 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.22□□□□□ -0.29
CTDP1-204ENST00000587623 FAM135AQ9P2D6 1515 aa13.21□□□□□ -0.29
CTDP1-204ENST00000587623 MROH2AA6NES4 1674 aa13.21□□□□□ -0.3
CTDP1-204ENST00000587623 CLTCQ00610 1675 aaKnown RBP13.21□□□□□ -0.3
CTDP1-204ENST00000587623 ERBINQ96RT1 1412 aa13.21□□□□□ -0.3
CTDP1-204ENST00000587623 C3P01024 1663 aa13.2□□□□□ -0.3
CTDP1-204ENST00000587623 NPATQ14207 1427 aa13.2□□□□□ -0.3
CTDP1-204ENST00000587623 NCOA1Q15788 1441 aa13.2□□□□□ -0.3
CTDP1-204ENST00000587623 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
CTDP1-204ENST00000587623 KDM5DQ9BY66 1539 aa13.19□□□□□ -0.3
CTDP1-204ENST00000587623 HSPA2P54652 639 aa13.19□□□□□ -0.3
CTDP1-204ENST00000587623 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.19□□□□□ -0.3
CTDP1-204ENST00000587623 LMTK3Q96Q04 1460 aa13.18□□□□□ -0.3
CTDP1-204ENST00000587623 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
CTDP1-204ENST00000587623 ADGRL2O95490 1459 aa13.16□□□□□ -0.3
CTDP1-204ENST00000587623 RNF17Q9BXT8 1623 aaKnown RBP13.16□□□□□ -0.3
CTDP1-204ENST00000587623 ANKRD50Q9ULJ7 1429 aa13.15□□□□□ -0.3
CTDP1-204ENST00000587623 DMRT2Q9Y5R5 561 aa13.15□□□□□ -0.3
CTDP1-204ENST00000587623 ROCK1Q13464 1354 aa13.15□□□□□ -0.3
CTDP1-204ENST00000587623 PTPRKQ15262 1439 aa13.14□□□□□ -0.31
CTDP1-204ENST00000587623 TNRQ92752 1358 aa13.14□□□□□ -0.31
CTDP1-204ENST00000587623 RRBP1Q9P2E9 1410 aaKnown RBP13.13□□□□□ -0.31
CTDP1-204ENST00000587623 PZPP20742 1482 aa13.13□□□□□ -0.31
CTDP1-204ENST00000587623 FBXO31Q5XUX0 539 aaPredicted RBP13.13□□□□□ -0.31
CTDP1-204ENST00000587623 ABCC3O15438 1527 aa13.13□□□□□ -0.31
CTDP1-204ENST00000587623 ZC3H13Q5T200 1668 aaKnown RBP13.12□□□□□ -0.31
CTDP1-204ENST00000587623 PRDM15P57071 1507 aaPredicted RBP13.09□□□□□ -0.31
CTDP1-204ENST00000587623 THEMISQ8N1K5 641 aaPredicted RBP13.09□□□□□ -0.31
CTDP1-204ENST00000587623 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
CTDP1-204ENST00000587623 CEP152O94986 1710 aa13.08□□□□□ -0.32
CTDP1-204ENST00000587623 PKD2Q13563 968 aa13.07□□□□□ -0.32
CTDP1-204ENST00000587623 A2ML1A8K2U0 1454 aa13.07□□□□□ -0.32
CTDP1-204ENST00000587623 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
CTDP1-204ENST00000587623 DEPDC5O75140 1603 aa13.06□□□□□ -0.32
CTDP1-204ENST00000587623 CAMSAP1Q5T5Y3 1602 aa13.06□□□□□ -0.32
CTDP1-204ENST00000587623 MROH1Q8NDA8 1641 aa13.06□□□□□ -0.32
CTDP1-204ENST00000587623 MYO3AQ8NEV4 1616 aa13.06□□□□□ -0.32
CTDP1-204ENST00000587623 NLRP1Q9C000 1473 aa13.06□□□□□ -0.32
CTDP1-204ENST00000587623 CEP170BQ9Y4F5 1589 aaPredicted RBP13.06□□□□□ -0.32
CTDP1-204ENST00000587623 NUP155O75694 1391 aa13.06□□□□□ -0.32
CTDP1-204ENST00000587623 ARHGAP31Q2M1Z3 1444 aa13.05□□□□□ -0.32
CTDP1-204ENST00000587623 ERVK-7P63135 1459 aa13.05□□□□□ -0.32
CTDP1-204ENST00000587623 ANKLE2Q86XL3 938 aa13.04□□□□□ -0.32
CTDP1-204ENST00000587623 TRIM52Q96A61 297 aa13.03□□□□□ -0.32
CTDP1-204ENST00000587623 NCKAP5LQ9HCH0 1330 aa13.03□□□□□ -0.32
CTDP1-204ENST00000587623 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
CTDP1-204ENST00000587623 SPATA31D1Q6ZQQ2 1576 aa13.03□□□□□ -0.32
CTDP1-204ENST00000587623 ZNF142P52746 1687 aaPredicted RBP13.02□□□□□ -0.32
CTDP1-204ENST00000587623 UGGT1Q9NYU2 1555 aa13.02□□□□□ -0.33
CTDP1-204ENST00000587623 PLA2R1Q13018 1463 aa13.01□□□□□ -0.33
CTDP1-204ENST00000587623 VWDEQ8N2E2 1590 aa13.01□□□□□ -0.33
CTDP1-204ENST00000587623 EFCAB6Q5THR3 1501 aa13□□□□□ -0.33
CTDP1-204ENST00000587623 RPRD2Q5VT52 1461 aaKnown RBP13□□□□□ -0.33
CTDP1-204ENST00000587623 PTPRTO14522 1441 aa13□□□□□ -0.33
CTDP1-204ENST00000587623 SLC52A1Q9NWF4 448 aa13□□□□□ -0.33
CTDP1-204ENST00000587623 EID1Q9Y6B2 187 aa13□□□□□ -0.33
CTDP1-204ENST00000587623 UNC13BO14795 1591 aa12.99□□□□□ -0.33
CTDP1-204ENST00000587623 NAIPQ13075 1403 aa12.99□□□□□ -0.33
CTDP1-204ENST00000587623 ACIN1Q9UKV3 1341 aaKnown RBP12.99□□□□□ -0.33
CTDP1-204ENST00000587623 HFM1A2PYH4 1435 aa12.98□□□□□ -0.33
CTDP1-204ENST00000587623 TET3O43151 1660 aa12.98□□□□□ -0.33
CTDP1-204ENST00000587623 STRCQ7RTU9 1775 aa12.97□□□□□ -0.33
CTDP1-204ENST00000587623 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
CTDP1-204ENST00000587623 HDGFP51858 240 aaKnown RBP12.97□□□□□ -0.33
CTDP1-204ENST00000587623 IDI1Q13907 227 aa12.97□□□□□ -0.33
CTDP1-204ENST00000587623 GCC2Q8IWJ2 1684 aa12.96□□□□□ -0.34
CTDP1-204ENST00000587623 IQGAP3Q86VI3 1631 aa12.95□□□□□ -0.34
CTDP1-204ENST00000587623 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
CTDP1-204ENST00000587623 SLC4A1APQ9BWU0 796 aaKnown RBP12.95□□□□□ -0.34
CTDP1-204ENST00000587623 NOS1P29475 1434 aa12.95□□□□□ -0.34
CTDP1-204ENST00000587623 BCANQ96GW7 911 aa12.94□□□□□ -0.34
CTDP1-204ENST00000587623 PPP1R15AO75807 674 aaPredicted RBP12.93□□□□□ -0.34
CTDP1-204ENST00000587623 CERKQ8TCT0 537 aa12.93□□□□□ -0.34
CTDP1-204ENST00000587623 NPHP4O75161 1426 aaPredicted RBP12.92□□□□□ -0.34
CTDP1-204ENST00000587623 TMEM2Q9UHN6 1383 aa12.91□□□□□ -0.34
CTDP1-204ENST00000587623 PIK3C2BO00750 1634 aa12.91□□□□□ -0.34
CTDP1-204ENST00000587623 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
CTDP1-204ENST00000587623 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
CTDP1-204ENST00000587623 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
CTDP1-204ENST00000587623 SETD5Q9C0A6 1442 aa12.9□□□□□ -0.34
CTDP1-204ENST00000587623 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.9□□□□□ -0.34
CTDP1-204ENST00000587623 SYNMO15061 1565 aa12.9□□□□□ -0.35
CTDP1-204ENST00000587623 E9PCH4 1651 aa12.89□□□□□ -0.35
CTDP1-204ENST00000587623 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
CTDP1-204ENST00000587623 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
CTDP1-204ENST00000587623 ADGRB3O60242 1522 aa12.88□□□□□ -0.35
CTDP1-204ENST00000587623 SLIT1O75093 1534 aa12.88□□□□□ -0.35
CTDP1-204ENST00000587623 ZNF335Q9H4Z2 1342 aaPredicted RBP12.88□□□□□ -0.35
CTDP1-204ENST00000587623 KDM5AP29375 1690 aaKnown RBP12.87□□□□□ -0.35
CTDP1-204ENST00000587623 MED14O60244 1454 aa12.87□□□□□ -0.35
CTDP1-204ENST00000587623 LTKP29376 864 aa12.87□□□□□ -0.35
CTDP1-204ENST00000587623 ARHGAP23Q9P227 1491 aa12.86□□□□□ -0.35
CTDP1-204ENST00000587623 ILDR1Q86SU0 546 aaPredicted RBP12.86□□□□□ -0.35
CTDP1-204ENST00000587623 MPHOSPH9Q99550 1183 aa12.85□□□□□ -0.35
CTDP1-204ENST00000587623 IQGAP1P46940 1657 aa12.85□□□□□ -0.35
CTDP1-204ENST00000587623 RIMS2Q9UQ26 1411 aa12.85□□□□□ -0.35
CTDP1-204ENST00000587623 NEURL4Q96JN8 1562 aa12.85□□□□□ -0.35
CTDP1-204ENST00000587623 SPHKAPQ2M3C7 1700 aa12.84□□□□□ -0.35
CTDP1-204ENST00000587623 RAB3GAP2Q9H2M9 1393 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms