RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 SIGLEC1Q9BZZ2 1709 aa27.55■■■□□ 2
H3F3B-206ENST00000587560 DHX29Q7Z478 1369 aaKnown RBP27.54■■■□□ 2
H3F3B-206ENST00000587560 RIMS1Q86UR5 1692 aaKnown RBP27.53■■■□□ 2
H3F3B-206ENST00000587560 EIF2AK4Q9P2K8 1649 aaKnown RBP27.52■■■□□ 2
H3F3B-206ENST00000587560 ERBINQ96RT1 1412 aa27.52■■■□□ 2
H3F3B-206ENST00000587560 ANKRD50Q9ULJ7 1429 aa27.51■■□□□ 1.99
H3F3B-206ENST00000587560 PCGF6Q9BYE7 350 aa27.51■■□□□ 1.99
H3F3B-206ENST00000587560 AGLP35573 1532 aa27.51■■□□□ 1.99
H3F3B-206ENST00000587560 SETD5Q9C0A6 1442 aa27.5■■□□□ 1.99
H3F3B-206ENST00000587560 MYT1LQ9UL68 1186 aa27.46■■□□□ 1.99
H3F3B-206ENST00000587560 DEPDC5O75140 1603 aa27.45■■□□□ 1.98
H3F3B-206ENST00000587560 RNF17Q9BXT8 1623 aaKnown RBP27.44■■□□□ 1.98
H3F3B-206ENST00000587560 HRCP23327 699 aa27.42■■□□□ 1.98
H3F3B-206ENST00000587560 RAB3GAP2Q9H2M9 1393 aa27.42■■□□□ 1.98
H3F3B-206ENST00000587560 MROH1Q8NDA8 1641 aa27.41■■□□□ 1.98
H3F3B-206ENST00000587560 UNC13BO14795 1591 aa27.41■■□□□ 1.98
H3F3B-206ENST00000587560 PRDM15P57071 1507 aaPredicted RBP27.36■■□□□ 1.97
H3F3B-206ENST00000587560 VWDEQ8N2E2 1590 aa27.35■■□□□ 1.97
H3F3B-206ENST00000587560 KDM5DQ9BY66 1539 aa27.34■■□□□ 1.97
H3F3B-206ENST00000587560 KIF3BO15066 747 aa27.32■■□□□ 1.96
H3F3B-206ENST00000587560 STRCQ7RTU9 1775 aa27.32■■□□□ 1.96
H3F3B-206ENST00000587560 ARID4BQ4LE39 1312 aaPredicted RBP27.31■■□□□ 1.96
H3F3B-206ENST00000587560 ACIN1Q9UKV3 1341 aaKnown RBP27.29■■□□□ 1.96
H3F3B-206ENST00000587560 IQGAP3Q86VI3 1631 aa27.29■■□□□ 1.96
H3F3B-206ENST00000587560 FAM135AQ9P2D6 1515 aa27.27■■□□□ 1.96
H3F3B-206ENST00000587560 PLPPR3Q6T4P5 718 aa27.26■■□□□ 1.95
H3F3B-206ENST00000587560 PZPP20742 1482 aa27.25■■□□□ 1.95
H3F3B-206ENST00000587560 LMTK2Q8IWU2 1503 aa27.24■■□□□ 1.95
H3F3B-206ENST00000587560 ZC3H13Q5T200 1668 aaKnown RBP27.22■■□□□ 1.95
H3F3B-206ENST00000587560 PPP6R1Q9UPN7 881 aa27.22■■□□□ 1.95
H3F3B-206ENST00000587560 ABCC3O15438 1527 aa27.21■■□□□ 1.95
H3F3B-206ENST00000587560 CEP152O94986 1710 aa27.2■■□□□ 1.94
H3F3B-206ENST00000587560 NUP155O75694 1391 aa27.19■■□□□ 1.94
H3F3B-206ENST00000587560 PREX1Q8TCU6 1659 aa27.18■■□□□ 1.94
H3F3B-206ENST00000587560 TET3O43151 1660 aa27.17■■□□□ 1.94
H3F3B-206ENST00000587560 GGT6Q6P531 493 aa27.17■■□□□ 1.94
H3F3B-206ENST00000587560 KANK1Q14678 1352 aa27.14■■□□□ 1.94
H3F3B-206ENST00000587560 LTBP4Q8N2S1 1624 aa27.14■■□□□ 1.94
H3F3B-206ENST00000587560 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.13■■□□□ 1.93
H3F3B-206ENST00000587560 CLTCQ00610 1675 aaKnown RBP27.13■■□□□ 1.93
H3F3B-206ENST00000587560 CAMSAP1Q5T5Y3 1602 aa27.12■■□□□ 1.93
H3F3B-206ENST00000587560 FER1L4A9Z1Z3 1794 aa27.12■■□□□ 1.93
H3F3B-206ENST00000587560 MROH2AA6NES4 1674 aa27.12■■□□□ 1.93
H3F3B-206ENST00000587560 TRIM52Q96A61 297 aa27.12■■□□□ 1.93
H3F3B-206ENST00000587560 DMRT2Q9Y5R5 561 aa27.12■■□□□ 1.93
H3F3B-206ENST00000587560 IQSEC2Q5JU85 1478 aa27.12■■□□□ 1.93
H3F3B-206ENST00000587560 EFCAB6Q5THR3 1501 aa27.11■■□□□ 1.93
H3F3B-206ENST00000587560 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
H3F3B-206ENST00000587560 MPHOSPH9Q99550 1183 aa27.1■■□□□ 1.93
H3F3B-206ENST00000587560 E9PCH4 1651 aa27.1■■□□□ 1.93
H3F3B-206ENST00000587560 MLECQ14165 292 aa27.09■■□□□ 1.93
H3F3B-206ENST00000587560 ARHGAP31Q2M1Z3 1444 aa27.08■■□□□ 1.93
H3F3B-206ENST00000587560 CNTLNQ9NXG0 1405 aa27.08■■□□□ 1.93
H3F3B-206ENST00000587560 WASHC2CQ9Y4E1 1318 aa27.07■■□□□ 1.92
H3F3B-206ENST00000587560 SLC4A1APQ9BWU0 796 aaKnown RBP27.04■■□□□ 1.92
H3F3B-206ENST00000587560 RPRD2Q5VT52 1461 aaKnown RBP27.04■■□□□ 1.92
H3F3B-206ENST00000587560 MED1Q15648 1581 aaPredicted RBP27.04■■□□□ 1.92
H3F3B-206ENST00000587560 NPATQ14207 1427 aa27.03■■□□□ 1.92
H3F3B-206ENST00000587560 PTPRTO14522 1441 aa26.99■■□□□ 1.91
H3F3B-206ENST00000587560 C3P01024 1663 aa26.99■■□□□ 1.91
H3F3B-206ENST00000587560 PKD2Q13563 968 aa26.99■■□□□ 1.91
H3F3B-206ENST00000587560 ZMYM3Q14202 1370 aa26.98■■□□□ 1.91
H3F3B-206ENST00000587560 PLA2R1Q13018 1463 aa26.97■■□□□ 1.91
H3F3B-206ENST00000587560 NOS1P29475 1434 aa26.96■■□□□ 1.91
H3F3B-206ENST00000587560 SPHKAPQ2M3C7 1700 aa26.95■■□□□ 1.9
H3F3B-206ENST00000587560 ANKRD30BQ9BXX2 1392 aa26.94■■□□□ 1.9
H3F3B-206ENST00000587560 CFAP65Q6ZU64 1925 aaKnown RBP26.93■■□□□ 1.9
H3F3B-206ENST00000587560 ERVK-7P63135 1459 aa26.92■■□□□ 1.9
H3F3B-206ENST00000587560 ESF1Q9H501 851 aaKnown RBP26.91■■□□□ 1.9
H3F3B-206ENST00000587560 TRPM2O94759 1503 aa26.9■■□□□ 1.9
H3F3B-206ENST00000587560 SYNMO15061 1565 aa26.9■■□□□ 1.9
H3F3B-206ENST00000587560 FOXD1Q16676 465 aa26.9■■□□□ 1.9
H3F3B-206ENST00000587560 PIK3C2BO00750 1634 aa26.87■■□□□ 1.89
H3F3B-206ENST00000587560 CLSPNQ9HAW4 1339 aa26.86■■□□□ 1.89
H3F3B-206ENST00000587560 FBXO31Q5XUX0 539 aaPredicted RBP26.85■■□□□ 1.89
H3F3B-206ENST00000587560 SETD1BQ9UPS6 1966 aaKnown RBP26.85■■□□□ 1.89
H3F3B-206ENST00000587560 CLTCL1P53675 1640 aa26.83■■□□□ 1.88
H3F3B-206ENST00000587560 UHRF1BP1Q6BDS2 1440 aa26.82■■□□□ 1.88
H3F3B-206ENST00000587560 UBAP1LF5GYI3 381 aa26.82■■□□□ 1.88
H3F3B-206ENST00000587560 CEBPAP49715 358 aaPredicted RBP26.82■■□□□ 1.88
H3F3B-206ENST00000587560 UGGT1Q9NYU2 1555 aa26.79■■□□□ 1.88
H3F3B-206ENST00000587560 TNRQ92752 1358 aa26.76■■□□□ 1.87
H3F3B-206ENST00000587560 CCER1Q8TC90 406 aaPredicted RBP26.75■■□□□ 1.87
H3F3B-206ENST00000587560 NEURL4Q96JN8 1562 aa26.75■■□□□ 1.87
H3F3B-206ENST00000587560 CCDC144AA2RUR9 1427 aa26.73■■□□□ 1.87
H3F3B-206ENST00000587560 MYO3AQ8NEV4 1616 aa26.72■■□□□ 1.87
H3F3B-206ENST00000587560 SLC52A1Q9NWF4 448 aa26.72■■□□□ 1.87
H3F3B-206ENST00000587560 KDM5AP29375 1690 aaKnown RBP26.72■■□□□ 1.87
H3F3B-206ENST00000587560 NLRP1Q9C000 1473 aa26.71■■□□□ 1.87
H3F3B-206ENST00000587560 KIF1BO60333 1816 aa26.7■■□□□ 1.87
H3F3B-206ENST00000587560 HSPA1LP34931 641 aa26.7■■□□□ 1.86
H3F3B-206ENST00000587560 TMEM131LA2VDJ0 1609 aa26.69■■□□□ 1.86
H3F3B-206ENST00000587560 IDI1Q13907 227 aa26.69■■□□□ 1.86
H3F3B-206ENST00000587560 SPATA31E1Q6ZUB1 1445 aa26.69■■□□□ 1.86
H3F3B-206ENST00000587560 SIN3AQ96ST3 1273 aa26.69■■□□□ 1.86
H3F3B-206ENST00000587560 ZNF142P52746 1687 aaPredicted RBP26.69■■□□□ 1.86
H3F3B-206ENST00000587560 ADGRB3O60242 1522 aa26.68■■□□□ 1.86
H3F3B-206ENST00000587560 PHF23Q9BUL5 403 aaPredicted RBP26.66■■□□□ 1.86
H3F3B-206ENST00000587560 MYO5BQ9ULV0 1848 aa26.66■■□□□ 1.86
H3F3B-206ENST00000587560 UBR1Q8IWV7 1749 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms