RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 CEP170BQ9Y4F5 1589 aaPredicted RBP13.25□□□□□ -0.29
NEDD4L-218ENST00000587547 MROH2AA6NES4 1674 aa13.24□□□□□ -0.29
NEDD4L-218ENST00000587547 TOM1O60784 492 aa13.24□□□□□ -0.29
NEDD4L-218ENST00000587547 CAPN15O75808 1086 aa13.24□□□□□ -0.29
NEDD4L-218ENST00000587547 KIDINS220Q9ULH0 1771 aa13.24□□□□□ -0.29
NEDD4L-218ENST00000587547 ABCC1P33527 1531 aa13.23□□□□□ -0.29
NEDD4L-218ENST00000587547 TROQ12816 1431 aaPredicted RBP13.23□□□□□ -0.29
NEDD4L-218ENST00000587547 ALKQ9UM73 1620 aa13.23□□□□□ -0.29
NEDD4L-218ENST00000587547 PTPRKQ15262 1439 aa13.22□□□□□ -0.29
NEDD4L-218ENST00000587547 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
NEDD4L-218ENST00000587547 POLA2Q14181 598 aa13.22□□□□□ -0.29
NEDD4L-218ENST00000587547 CDC42BPBQ9Y5S2 1711 aa13.22□□□□□ -0.29
NEDD4L-218ENST00000587547 C1QBPQ07021 282 aaKnown RBP13.21□□□□□ -0.29
NEDD4L-218ENST00000587547 ITSN2Q9NZM3 1697 aa13.21□□□□□ -0.3
NEDD4L-218ENST00000587547 CPS1P31327 1500 aa13.2□□□□□ -0.3
NEDD4L-218ENST00000587547 SUPT6HQ7KZ85 1726 aaKnown RBP13.2□□□□□ -0.3
NEDD4L-218ENST00000587547 RGS17Q9UGC6 210 aaPredicted RBP13.2□□□□□ -0.3
NEDD4L-218ENST00000587547 CDK11AQ9UQ88 783 aaPredicted RBP13.2□□□□□ -0.3
NEDD4L-218ENST00000587547 CLTCQ00610 1675 aaKnown RBP13.19□□□□□ -0.3
NEDD4L-218ENST00000587547 CCDC18Q5T9S5 1454 aa13.19□□□□□ -0.3
NEDD4L-218ENST00000587547 SHANK2Q9UPX8 1470 aa13.19□□□□□ -0.3
NEDD4L-218ENST00000587547 TIAM1Q13009 1591 aa13.19□□□□□ -0.3
NEDD4L-218ENST00000587547 NEURL4Q96JN8 1562 aa13.18□□□□□ -0.3
NEDD4L-218ENST00000587547 PREX2Q70Z35 1606 aa13.17□□□□□ -0.3
NEDD4L-218ENST00000587547 SAMD9LQ8IVG5 1584 aa13.16□□□□□ -0.3
NEDD4L-218ENST00000587547 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
NEDD4L-218ENST00000587547 A2ML1A8K2U0 1454 aa13.16□□□□□ -0.3
NEDD4L-218ENST00000587547 VWDEQ8N2E2 1590 aa13.14□□□□□ -0.31
NEDD4L-218ENST00000587547 PLXNC1O60486 1568 aa13.13□□□□□ -0.31
NEDD4L-218ENST00000587547 SLC24A1O60721 1099 aa13.12□□□□□ -0.31
NEDD4L-218ENST00000587547 GGT6Q6P531 493 aa13.12□□□□□ -0.31
NEDD4L-218ENST00000587547 POLR1AO95602 1720 aaPredicted RBP13.12□□□□□ -0.31
NEDD4L-218ENST00000587547 SPAG9O60271 1321 aaKnown RBP13.12□□□□□ -0.31
NEDD4L-218ENST00000587547 MAP3K1Q13233 1512 aa13.11□□□□□ -0.31
NEDD4L-218ENST00000587547 SYCP2Q9BX26 1530 aa13.11□□□□□ -0.31
NEDD4L-218ENST00000587547 EHBP1L1Q8N3D4 1523 aa13.1□□□□□ -0.31
NEDD4L-218ENST00000587547 A2MP01023 1474 aa13.1□□□□□ -0.31
NEDD4L-218ENST00000587547 ATP7AQ04656 1500 aa13.09□□□□□ -0.31
NEDD4L-218ENST00000587547 POTEAQ6S8J7 498 aa13.09□□□□□ -0.31
NEDD4L-218ENST00000587547 PPARGC1BQ86YN6 1023 aaKnown RBP13.09□□□□□ -0.31
NEDD4L-218ENST00000587547 ZNF777Q9ULD5 760 aaPredicted RBP13.09□□□□□ -0.31
NEDD4L-218ENST00000587547 MTUS2Q5JR59 1369 aa13.08□□□□□ -0.31
NEDD4L-218ENST00000587547 CDC42BPAQ5VT25 1732 aa13.08□□□□□ -0.32
NEDD4L-218ENST00000587547 HNRNPMP52272 730 aaKnown RBP eCLIP13.08□□□□□ -0.329e-7■■■■■ 32.6
NEDD4L-218ENST00000587547 FBXO3Q9UK99 471 aa13.08□□□□□ -0.32
NEDD4L-218ENST00000587547 LRRC9Q6ZRR7 1453 aa13.08□□□□□ -0.32
NEDD4L-218ENST00000587547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEDD4L-218ENST00000587547 INO80Q9ULG1 1556 aaPredicted RBP13.07□□□□□ -0.32
NEDD4L-218ENST00000587547 KANK4Q5T7N3 995 aaPredicted RBP13.07□□□□□ -0.32
NEDD4L-218ENST00000587547 PROM2Q8N271 834 aa13.07□□□□□ -0.32
NEDD4L-218ENST00000587547 TNRQ92752 1358 aa13.07□□□□□ -0.32
NEDD4L-218ENST00000587547 FBXO31Q5XUX0 539 aaPredicted RBP13.06□□□□□ -0.32
NEDD4L-218ENST00000587547 LRRC7Q96NW7 1537 aa13.06□□□□□ -0.32
NEDD4L-218ENST00000587547 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
NEDD4L-218ENST00000587547 ABCB7O75027 752 aa13.05□□□□□ -0.32
NEDD4L-218ENST00000587547 ANKLE2Q86XL3 938 aa13.05□□□□□ -0.32
NEDD4L-218ENST00000587547 RNF17Q9BXT8 1623 aaKnown RBP13.05□□□□□ -0.32
NEDD4L-218ENST00000587547 STRCP1A6NGW2 1772 aa13.04□□□□□ -0.32
NEDD4L-218ENST00000587547 MED14O60244 1454 aa13.04□□□□□ -0.32
NEDD4L-218ENST00000587547 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.32
NEDD4L-218ENST00000587547 GPATCH8Q9UKJ3 1502 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-218ENST00000587547 PZPP20742 1482 aa13.01□□□□□ -0.33
NEDD4L-218ENST00000587547 NCOA2Q15596 1464 aa13.01□□□□□ -0.33
NEDD4L-218ENST00000587547 DEPDC5O75140 1603 aa13.01□□□□□ -0.33
NEDD4L-218ENST00000587547 IQGAP1P46940 1657 aa13□□□□□ -0.33
NEDD4L-218ENST00000587547 SYNMO15061 1565 aa13□□□□□ -0.33
NEDD4L-218ENST00000587547 KIAA1107Q9UPP5 1409 aa13□□□□□ -0.33
NEDD4L-218ENST00000587547 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
NEDD4L-218ENST00000587547 THEMISQ8N1K5 641 aaPredicted RBP12.99□□□□□ -0.33
NEDD4L-218ENST00000587547 UGGT1Q9NYU2 1555 aa12.98□□□□□ -0.33
NEDD4L-218ENST00000587547 FAM135AQ9P2D6 1515 aa12.98□□□□□ -0.33
NEDD4L-218ENST00000587547 MIA2Q96PC5 1412 aa12.97□□□□□ -0.33
NEDD4L-218ENST00000587547 ADGBQ8N7X0 1667 aa12.97□□□□□ -0.33
NEDD4L-218ENST00000587547 NLRP1Q9C000 1473 aa12.97□□□□□ -0.33
NEDD4L-218ENST00000587547 KDM5DQ9BY66 1539 aa12.96□□□□□ -0.33
NEDD4L-218ENST00000587547 PLEKHH2Q8IVE3 1493 aa12.96□□□□□ -0.34
NEDD4L-218ENST00000587547 CCNB3Q8WWL7 1395 aa12.95□□□□□ -0.34
NEDD4L-218ENST00000587547 CFDP1Q9UEE9 299 aaPredicted RBP12.95□□□□□ -0.34
NEDD4L-218ENST00000587547 DHX29Q7Z478 1369 aaKnown RBP12.94□□□□□ -0.34
NEDD4L-218ENST00000587547 ZNF644Q9H582 1327 aaPredicted RBP12.93□□□□□ -0.34
NEDD4L-218ENST00000587547 KIF3BO15066 747 aa12.93□□□□□ -0.34
NEDD4L-218ENST00000587547 FAM135BQ49AJ0 1406 aa12.93□□□□□ -0.34
NEDD4L-218ENST00000587547 ZC3H13Q5T200 1668 aaKnown RBP12.93□□□□□ -0.34
NEDD4L-218ENST00000587547 MYOM3Q5VTT5 1437 aa12.92□□□□□ -0.34
NEDD4L-218ENST00000587547 MBD5Q9P267 1494 aa12.91□□□□□ -0.34
NEDD4L-218ENST00000587547 WASHC2CQ9Y4E1 1318 aa12.91□□□□□ -0.34
NEDD4L-218ENST00000587547 XIRP1Q702N8 1843 aaKnown RBP12.91□□□□□ -0.34
NEDD4L-218ENST00000587547 DSG3P32926 999 aa12.91□□□□□ -0.34
NEDD4L-218ENST00000587547 VASPP50552 380 aaPredicted RBP12.91□□□□□ -0.34
NEDD4L-218ENST00000587547 PTPN23Q9H3S7 1636 aa12.91□□□□□ -0.34
NEDD4L-218ENST00000587547 UPF1Q92900 1129 aaKnown RBP eCLIP12.9□□□□□ -0.34
NEDD4L-218ENST00000587547 RTEL1-TNFRSF6BF6WH68 1400 aa12.89□□□□□ -0.35
NEDD4L-218ENST00000587547 FGD6Q6ZV73 1430 aa12.88□□□□□ -0.35
NEDD4L-218ENST00000587547 SCAF11Q99590 1463 aaKnown RBP12.87□□□□□ -0.35
NEDD4L-218ENST00000587547 ROBO1Q9Y6N7 1651 aa12.86□□□□□ -0.35
NEDD4L-218ENST00000587547 CAMSAP2Q08AD1 1489 aa12.86□□□□□ -0.35
NEDD4L-218ENST00000587547 LTKP29376 864 aa12.86□□□□□ -0.35
NEDD4L-218ENST00000587547 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
NEDD4L-218ENST00000587547 TMEM94Q12767 1356 aa12.84□□□□□ -0.35
NEDD4L-218ENST00000587547 SRCAPQ6ZRS2 3230 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms