RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ABCC5O15440 1437 aa36.2■■■■□ 3.39
LSM7-204ENST00000587502 KDM5DQ9BY66 1539 aa36.19■■■■□ 3.38
LSM7-204ENST00000587502 DAPK1P53355 1430 aa36.16■■■■□ 3.38
LSM7-204ENST00000587502 DUOX2Q9NRD8 1548 aa36.15■■■■□ 3.38
LSM7-204ENST00000587502 EIF2AK4Q9P2K8 1649 aaKnown RBP36.15■■■■□ 3.38
LSM7-204ENST00000587502 CROCC2H7BZ55 1655 aa36.13■■■■□ 3.37
LSM7-204ENST00000587502 DNMT1P26358 1616 aaKnown RBP36.12■■■■□ 3.37
LSM7-204ENST00000587502 STRCQ7RTU9 1775 aa36.12■■■■□ 3.37
LSM7-204ENST00000587502 RNF17Q9BXT8 1623 aaKnown RBP36.12■■■■□ 3.37
LSM7-204ENST00000587502 KIF15Q9NS87 1388 aa36.11■■■■□ 3.37
LSM7-204ENST00000587502 PZPP20742 1482 aa36.09■■■■□ 3.37
LSM7-204ENST00000587502 MYO3AQ8NEV4 1616 aa36.08■■■■□ 3.37
LSM7-204ENST00000587502 RRP7BPQ9NSQ0 103 aa36.07■■■■□ 3.36
LSM7-204ENST00000587502 NCOA1Q15788 1441 aa36.06■■■■□ 3.36
LSM7-204ENST00000587502 ERBINQ96RT1 1412 aa36.05■■■■□ 3.36
LSM7-204ENST00000587502 ANKRD30AQ9BXX3 1397 aa36.04■■■■□ 3.36
LSM7-204ENST00000587502 ZNF142P52746 1687 aaPredicted RBP36.04■■■■□ 3.36
LSM7-204ENST00000587502 PTPRTO14522 1441 aa36.04■■■■□ 3.36
LSM7-204ENST00000587502 CEP170BQ9Y4F5 1589 aaPredicted RBP36.02■■■■□ 3.36
LSM7-204ENST00000587502 CAMSAP1Q5T5Y3 1602 aa36.02■■■■□ 3.36
LSM7-204ENST00000587502 FAM50AQ14320 339 aaKnown RBP36.02■■■■□ 3.36
LSM7-204ENST00000587502 ZC3H13Q5T200 1668 aaKnown RBP36.02■■■■□ 3.36
LSM7-204ENST00000587502 TNRQ92752 1358 aa36.02■■■■□ 3.36
LSM7-204ENST00000587502 FBXO31Q5XUX0 539 aaPredicted RBP36■■■■□ 3.35
LSM7-204ENST00000587502 ABCC3O15438 1527 aa35.99■■■■□ 3.35
LSM7-204ENST00000587502 A2ML1A8K2U0 1454 aa35.99■■■■□ 3.35
LSM7-204ENST00000587502 CHIC2Q9UKJ5 165 aa35.98■■■■□ 3.35
LSM7-204ENST00000587502 PLA2R1Q13018 1463 aa35.96■■■■□ 3.35
LSM7-204ENST00000587502 PKD2Q13563 968 aa35.95■■■■□ 3.35
LSM7-204ENST00000587502 MROH1Q8NDA8 1641 aa35.94■■■■□ 3.34
LSM7-204ENST00000587502 CERKQ8TCT0 537 aa35.91■■■■□ 3.34
LSM7-204ENST00000587502 ADGRL2O95490 1459 aa35.91■■■■□ 3.34
LSM7-204ENST00000587502 NLRP1Q9C000 1473 aa35.9■■■■□ 3.34
LSM7-204ENST00000587502 PRDM15P57071 1507 aaPredicted RBP35.89■■■■□ 3.34
LSM7-204ENST00000587502 KANK1Q14678 1352 aa35.88■■■■□ 3.33
LSM7-204ENST00000587502 NCKAP5LQ9HCH0 1330 aa35.87■■■■□ 3.33
LSM7-204ENST00000587502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.84■■■■□ 3.338e-8■■□□□ 14
LSM7-204ENST00000587502 DEPDC5O75140 1603 aa35.83■■■■□ 3.33
LSM7-204ENST00000587502 CEP152O94986 1710 aa35.83■■■■□ 3.33
LSM7-204ENST00000587502 THEMISQ8N1K5 641 aaPredicted RBP35.83■■■■□ 3.33
LSM7-204ENST00000587502 SPATA31D1Q6ZQQ2 1576 aa35.83■■■■□ 3.33
LSM7-204ENST00000587502 ARHGAP31Q2M1Z3 1444 aa35.82■■■■□ 3.32
LSM7-204ENST00000587502 ERVK-7P63135 1459 aa35.8■■■■□ 3.32
LSM7-204ENST00000587502 UGGT1Q9NYU2 1555 aa35.76■■■■□ 3.32
LSM7-204ENST00000587502 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.76■■■■□ 3.31
LSM7-204ENST00000587502 ANKRD50Q9ULJ7 1429 aa35.75■■■■□ 3.31
LSM7-204ENST00000587502 PPARGC1BQ86YN6 1023 aaKnown RBP35.75■■■■□ 3.31
LSM7-204ENST00000587502 ANKLE2Q86XL3 938 aa35.73■■■■□ 3.31
LSM7-204ENST00000587502 LMTK2Q8IWU2 1503 aa35.73■■■■□ 3.31
LSM7-204ENST00000587502 ROCK1Q13464 1354 aa35.72■■■■□ 3.31
LSM7-204ENST00000587502 CFAP65Q6ZU64 1925 aaKnown RBP35.7■■■■□ 3.31
LSM7-204ENST00000587502 VWDEQ8N2E2 1590 aa35.7■■■■□ 3.31
LSM7-204ENST00000587502 LTBP4Q8N2S1 1624 aa35.66■■■■□ 3.3
LSM7-204ENST00000587502 POLR1AO95602 1720 aaPredicted RBP35.66■■■■□ 3.3
LSM7-204ENST00000587502 IQSEC2Q5JU85 1478 aa35.6■■■■□ 3.29
LSM7-204ENST00000587502 ZNF335Q9H4Z2 1342 aaPredicted RBP35.59■■■■□ 3.29
LSM7-204ENST00000587502 ITGAEP38570 1179 aa35.59■■■■□ 3.29
LSM7-204ENST00000587502 NEURL4Q96JN8 1562 aa35.58■■■■□ 3.29
LSM7-204ENST00000587502 EFCAB6Q5THR3 1501 aa35.57■■■■□ 3.29
LSM7-204ENST00000587502 MED14O60244 1454 aa35.57■■■■□ 3.28
LSM7-204ENST00000587502 UBR1Q8IWV7 1749 aa35.54■■■■□ 3.28
LSM7-204ENST00000587502 NPHP4O75161 1426 aaPredicted RBP35.53■■■■□ 3.28
LSM7-204ENST00000587502 RRBP1Q9P2E9 1410 aaKnown RBP35.53■■■■□ 3.28
LSM7-204ENST00000587502 RPRD2Q5VT52 1461 aaKnown RBP35.53■■■■□ 3.28
LSM7-204ENST00000587502 STAG3Q9UJ98 1225 aa35.51■■■■□ 3.28
LSM7-204ENST00000587502 UNC13BO14795 1591 aa35.5■■■■□ 3.27
LSM7-204ENST00000587502 NOS1P29475 1434 aa35.49■■■■□ 3.27
LSM7-204ENST00000587502 SLC52A1Q9NWF4 448 aa35.48■■■■□ 3.27
LSM7-204ENST00000587502 IDI1Q13907 227 aa35.47■■■■□ 3.27
LSM7-204ENST00000587502 TET3O43151 1660 aa35.46■■■■□ 3.27
LSM7-204ENST00000587502 SLIT1O75093 1534 aa35.46■■■■□ 3.27
LSM7-204ENST00000587502 EID1Q9Y6B2 187 aa35.45■■■■□ 3.27
LSM7-204ENST00000587502 KDM5AP29375 1690 aaKnown RBP35.44■■■■□ 3.26
LSM7-204ENST00000587502 IQGAP1P46940 1657 aa35.44■■■■□ 3.26
LSM7-204ENST00000587502 PIK3C2BO00750 1634 aa35.44■■■■□ 3.26
LSM7-204ENST00000587502 ARHGAP23Q9P227 1491 aa35.44■■■■□ 3.26
LSM7-204ENST00000587502 SCAF11Q99590 1463 aaKnown RBP35.43■■■■□ 3.26
LSM7-204ENST00000587502 TXNDC2Q86VQ3 553 aa35.43■■■■□ 3.26
LSM7-204ENST00000587502 SYNMO15061 1565 aa35.42■■■■□ 3.26
LSM7-204ENST00000587502 ILDR2Q71H61 639 aa35.41■■■■□ 3.26
LSM7-204ENST00000587502 CPS1P31327 1500 aa35.41■■■■□ 3.26
LSM7-204ENST00000587502 GCC2Q8IWJ2 1684 aa35.4■■■■□ 3.26
LSM7-204ENST00000587502 SOCS7O14512 581 aa35.4■■■■□ 3.26
LSM7-204ENST00000587502 TMEM2Q9UHN6 1383 aa35.39■■■■□ 3.26
LSM7-204ENST00000587502 NUP155O75694 1391 aa35.38■■■■□ 3.26
LSM7-204ENST00000587502 DISP3Q9P2K9 1392 aa35.38■■■■□ 3.26
LSM7-204ENST00000587502 LTKP29376 864 aa35.37■■■■□ 3.25
LSM7-204ENST00000587502 IQGAP3Q86VI3 1631 aa35.36■■■■□ 3.25
LSM7-204ENST00000587502 ADGRB3O60242 1522 aa35.32■■■■□ 3.24
LSM7-204ENST00000587502 UBAP1LF5GYI3 381 aa35.29■■■■□ 3.24
LSM7-204ENST00000587502 E9PCH4 1651 aa35.27■■■■□ 3.24
LSM7-204ENST00000587502 HDGFP51858 240 aaKnown RBP35.24■■■■□ 3.23
LSM7-204ENST00000587502 NAIPQ13075 1403 aa35.23■■■■□ 3.23
LSM7-204ENST00000587502 TOM1O60784 492 aa35.18■■■■□ 3.22
LSM7-204ENST00000587502 HFM1A2PYH4 1435 aa35.17■■■■□ 3.22
LSM7-204ENST00000587502 TMEM131LA2VDJ0 1609 aa35.15■■■■□ 3.22
LSM7-204ENST00000587502 CHGAP10645 457 aaKnown RBP35.15■■■■□ 3.22
LSM7-204ENST00000587502 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.12■■■■□ 3.21
LSM7-204ENST00000587502 ZFYVE9O95405 1425 aa35.12■■■■□ 3.21
LSM7-204ENST00000587502 STRCP1A6NGW2 1772 aa35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms