RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 ZCCHC6Q5VYS8 1495 aaKnown RBP6.45□□□□□ -1.38
LDLRAD4-209ENST00000587440 SMYD5Q6GMV2 418 aa6.44□□□□□ -1.38
LDLRAD4-209ENST00000587440 URB2Q14146 1524 aaKnown RBP6.44□□□□□ -1.38
LDLRAD4-209ENST00000587440 SEC24BO95487 1268 aa6.43□□□□□ -1.38
LDLRAD4-209ENST00000587440 BARGINQ6ZT62 677 aa6.43□□□□□ -1.38
LDLRAD4-209ENST00000587440 CERKQ8TCT0 537 aa6.43□□□□□ -1.38
LDLRAD4-209ENST00000587440 PEG3Q9GZU2 1588 aa6.43□□□□□ -1.38
LDLRAD4-209ENST00000587440 NEUROD2Q15784 382 aa6.42□□□□□ -1.38
LDLRAD4-209ENST00000587440 SYNJ1O43426 1573 aa6.42□□□□□ -1.38
LDLRAD4-209ENST00000587440 ABCC10Q5T3U5 1492 aa6.41□□□□□ -1.38
LDLRAD4-209ENST00000587440 TOP2BQ02880 1626 aa6.41□□□□□ -1.38
LDLRAD4-209ENST00000587440 G3V3G9 751 aa6.41□□□□□ -1.38
LDLRAD4-209ENST00000587440 PTGER2P43116 358 aa6.4□□□□□ -1.38
LDLRAD4-209ENST00000587440 PRIM1P49642 420 aaKnown RBP6.4□□□□□ -1.38
LDLRAD4-209ENST00000587440 GPIHBP1Q8IV16 184 aa6.4□□□□□ -1.38
LDLRAD4-209ENST00000587440 UPF1Q92900 1129 aaKnown RBP eCLIP6.4□□□□□ -1.38
LDLRAD4-209ENST00000587440 PTCD2Q8WV60 388 aaKnown RBP6.39□□□□□ -1.39
LDLRAD4-209ENST00000587440 SRCAPQ6ZRS2 3230 aa6.38□□□□□ -1.39
LDLRAD4-209ENST00000587440 SLC34A2O95436 690 aa6.38□□□□□ -1.39
LDLRAD4-209ENST00000587440 OSBPP22059 807 aa6.38□□□□□ -1.39
LDLRAD4-209ENST00000587440 DIP2BQ9P265 1576 aa6.37□□□□□ -1.39
LDLRAD4-209ENST00000587440 POTEJP0CG39 1038 aa6.37□□□□□ -1.39
LDLRAD4-209ENST00000587440 MAP3K9P80192 1104 aa6.37□□□□□ -1.39
LDLRAD4-209ENST00000587440 FAM69CQ0P6D2 419 aa6.36□□□□□ -1.39
LDLRAD4-209ENST00000587440 GRXCR2A6NFK2 248 aa6.35□□□□□ -1.39
LDLRAD4-209ENST00000587440 EVI5O60447 810 aa6.35□□□□□ -1.39
LDLRAD4-209ENST00000587440 C3orf67Q6ZVT6 689 aa6.35□□□□□ -1.39
LDLRAD4-209ENST00000587440 GPBP1L1Q9HC44 474 aaPredicted RBP6.35□□□□□ -1.39
LDLRAD4-209ENST00000587440 ANO8Q9HCE9 1232 aaPredicted RBP6.35□□□□□ -1.39
LDLRAD4-209ENST00000587440 DDX12PQ92771 950 aa6.34□□□□□ -1.39
LDLRAD4-209ENST00000587440 AK7Q96M32 723 aa6.34□□□□□ -1.39
LDLRAD4-209ENST00000587440 MAPKBP1O60336 1514 aa6.34□□□□□ -1.39
LDLRAD4-209ENST00000587440 PCF11O94913 1555 aaKnown RBP6.32□□□□□ -1.4
LDLRAD4-209ENST00000587440 POTEB2H3BUK9 544 aa6.32□□□□□ -1.4
LDLRAD4-209ENST00000587440 TRIM66O15016 1216 aa6.31□□□□□ -1.4
LDLRAD4-209ENST00000587440 FECHP22830 423 aa6.31□□□□□ -1.4
LDLRAD4-209ENST00000587440 CFTRP13569 1480 aa6.3□□□□□ -1.4
LDLRAD4-209ENST00000587440 PTGDRQ13258 359 aa6.3□□□□□ -1.4
LDLRAD4-209ENST00000587440 KRI1Q8N9T8 703 aaKnown RBP6.3□□□□□ -1.4
LDLRAD4-209ENST00000587440 PCDHGA4Q9Y5G9 962 aa6.3□□□□□ -1.4
LDLRAD4-209ENST00000587440 AQRO60306 1485 aaKnown RBP eCLIP6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 NUTM2FA1L443 756 aa6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 TBC1D12O60347 775 aa6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 PDE4DQ08499 809 aa6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 MAP2K5Q13163 448 aa6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 C14orf37Q86TY3 774 aa6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 KDM4CQ9H3R0 1056 aa6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 CDHR5Q9HBB8 845 aa6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.29□□□□□ -1.4
LDLRAD4-209ENST00000587440 SNAPC4Q5SXM2 1469 aa6.28□□□□□ -1.4
LDLRAD4-209ENST00000587440 HOXB3P14651 431 aaPredicted RBP6.28□□□□□ -1.4
LDLRAD4-209ENST00000587440 EN1Q05925 392 aaPredicted RBP6.28□□□□□ -1.4
LDLRAD4-209ENST00000587440 CCDC102AQ96A19 550 aa6.28□□□□□ -1.4
LDLRAD4-209ENST00000587440 NPDC1Q9NQX5 325 aaPredicted RBP6.28□□□□□ -1.4
LDLRAD4-209ENST00000587440 PCDHGA10Q9Y5H3 936 aa6.28□□□□□ -1.4
LDLRAD4-209ENST00000587440 TSPOAP1O95153 1857 aa6.28□□□□□ -1.4
LDLRAD4-209ENST00000587440 MINK1Q8N4C8 1332 aaPredicted RBP6.27□□□□□ -1.41
LDLRAD4-209ENST00000587440 GNPATO15228 680 aa6.27□□□□□ -1.41
LDLRAD4-209ENST00000587440 HIC1Q14526 733 aa6.27□□□□□ -1.41
LDLRAD4-209ENST00000587440 ERICH6Q7L0X2 663 aa6.27□□□□□ -1.41
LDLRAD4-209ENST00000587440 OTUD5Q96G74 571 aa6.27□□□□□ -1.41
LDLRAD4-209ENST00000587440 TARBP1Q13395 1621 aaKnown RBP6.26□□□□□ -1.41
LDLRAD4-209ENST00000587440 IRF6O14896 467 aa6.26□□□□□ -1.41
LDLRAD4-209ENST00000587440 FCHSD2O94868 740 aa6.26□□□□□ -1.41
LDLRAD4-209ENST00000587440 PHF14O94880 888 aa6.26□□□□□ -1.41
LDLRAD4-209ENST00000587440 AMHR2Q16671 573 aa6.26□□□□□ -1.41
LDLRAD4-209ENST00000587440 MAGI1Q96QZ7 1491 aaPredicted RBP6.26□□□□□ -1.41
LDLRAD4-209ENST00000587440 WDR97A6NE52 1622 aa6.25□□□□□ -1.41
LDLRAD4-209ENST00000587440 IL27Q8NEV9 243 aa6.25□□□□□ -1.41
LDLRAD4-209ENST00000587440 CHMP7Q8WUX9 453 aaPredicted RBP6.25□□□□□ -1.41
LDLRAD4-209ENST00000587440 ABCC8Q09428 1581 aa6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 MED1Q15648 1581 aaPredicted RBP6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 IQSEC2Q5JU85 1478 aa6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 ZNF316A6NFI3 1004 aaPredicted RBP6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 TSR1Q2NL82 804 aaKnown RBP6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 JPH4Q96JJ6 628 aa6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 EPAS1Q99814 870 aa6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 TOPBP1Q92547 1522 aa6.24□□□□□ -1.41
LDLRAD4-209ENST00000587440 FOSBP53539 338 aa6.23□□□□□ -1.41
LDLRAD4-209ENST00000587440 IFFO2Q5TF58 517 aa6.23□□□□□ -1.41
LDLRAD4-209ENST00000587440 PARP9Q8IXQ6 854 aa6.23□□□□□ -1.41
LDLRAD4-209ENST00000587440 SLAIN1Q8ND83 568 aa6.23□□□□□ -1.41
LDLRAD4-209ENST00000587440 KHSRPQ92945 711 aaKnown RBP eCLIP6.23□□□□□ -1.41
LDLRAD4-209ENST00000587440 FAM117AQ9C073 453 aa6.23□□□□□ -1.41
LDLRAD4-209ENST00000587440 PTPRMP28827 1452 aa6.22□□□□□ -1.41
LDLRAD4-209ENST00000587440 PLEKHG3A1L390 1219 aa6.22□□□□□ -1.41
LDLRAD4-209ENST00000587440 GPR153Q6NV75 609 aa6.22□□□□□ -1.41
LDLRAD4-209ENST00000587440 TYW1BQ6NUM6 668 aa6.21□□□□□ -1.42
LDLRAD4-209ENST00000587440 PLSCR2Q9NRY7 297 aa6.21□□□□□ -1.42
LDLRAD4-209ENST00000587440 PRDM2Q13029 1718 aa6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 MAP3K7O43318 606 aa6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 ARSIQ5FYB1 569 aa6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 FBXW7Q969H0 707 aa6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 RBM33Q96EV2 1170 aaKnown RBP6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 PHOX2BQ99453 314 aa6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 TMUB1Q9BVT8 246 aa6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 REPIN1Q9BWE0 567 aaKnown RBP6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 PPRC1Q5VV67 1664 aaKnown RBP6.2□□□□□ -1.42
LDLRAD4-209ENST00000587440 CEP170Q5SW79 1584 aa6.19□□□□□ -1.42
LDLRAD4-209ENST00000587440 NUDT7P0C024 238 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms