RNA–Protein interactions for RNA: ENST00000587376.5

ERCC2-210, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-210ENST00000587376 PTPRTO14522 1441 aa23.93■■□□□ 1.42
ERCC2-210ENST00000587376 ZNF142P52746 1687 aaPredicted RBP23.92■■□□□ 1.42
ERCC2-210ENST00000587376 CAMSAP1Q5T5Y3 1602 aa23.92■■□□□ 1.42
ERCC2-210ENST00000587376 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
ERCC2-210ENST00000587376 CEP170BQ9Y4F5 1589 aaPredicted RBP23.91■■□□□ 1.42
ERCC2-210ENST00000587376 CERKQ8TCT0 537 aa23.91■■□□□ 1.42
ERCC2-210ENST00000587376 NCOA1Q15788 1441 aa23.91■■□□□ 1.42
ERCC2-210ENST00000587376 FGD6Q6ZV73 1430 aa23.91■■□□□ 1.42
ERCC2-210ENST00000587376 DUOX2Q9NRD8 1548 aa23.89■■□□□ 1.42
ERCC2-210ENST00000587376 SHANK2Q9UPX8 1470 aa23.89■■□□□ 1.42
ERCC2-210ENST00000587376 CROCC2H7BZ55 1655 aa23.89■■□□□ 1.41
ERCC2-210ENST00000587376 PZPP20742 1482 aa23.88■■□□□ 1.41
ERCC2-210ENST00000587376 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
ERCC2-210ENST00000587376 TNRQ92752 1358 aa23.87■■□□□ 1.41
ERCC2-210ENST00000587376 ZC3H13Q5T200 1668 aaKnown RBP23.86■■□□□ 1.41
ERCC2-210ENST00000587376 PKD2Q13563 968 aa23.86■■□□□ 1.41
ERCC2-210ENST00000587376 DAPK1P53355 1430 aa23.85■■□□□ 1.41
ERCC2-210ENST00000587376 KIF15Q9NS87 1388 aa23.85■■□□□ 1.41
ERCC2-210ENST00000587376 A2ML1A8K2U0 1454 aa23.85■■□□□ 1.41
ERCC2-210ENST00000587376 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
ERCC2-210ENST00000587376 ABCC5O15440 1437 aa23.84■■□□□ 1.41
ERCC2-210ENST00000587376 DNMT1P26358 1616 aaKnown RBP23.84■■□□□ 1.41
ERCC2-210ENST00000587376 PLA2R1Q13018 1463 aa23.84■■□□□ 1.41
ERCC2-210ENST00000587376 FBXO31Q5XUX0 539 aaPredicted RBP23.83■■□□□ 1.41
ERCC2-210ENST00000587376 RRP7BPQ9NSQ0 103 aa23.83■■□□□ 1.41
ERCC2-210ENST00000587376 ERBINQ96RT1 1412 aa23.82■■□□□ 1.4
ERCC2-210ENST00000587376 ANKRD30AQ9BXX3 1397 aa23.81■■□□□ 1.4
ERCC2-210ENST00000587376 NCKAP5LQ9HCH0 1330 aa23.81■■□□□ 1.4
ERCC2-210ENST00000587376 FAM50AQ14320 339 aaKnown RBP23.8■■□□□ 1.4
ERCC2-210ENST00000587376 ABCC3O15438 1527 aa23.79■■□□□ 1.4
ERCC2-210ENST00000587376 NLRP1Q9C000 1473 aa23.78■■□□□ 1.4
ERCC2-210ENST00000587376 KANK1Q14678 1352 aa23.78■■□□□ 1.4
ERCC2-210ENST00000587376 CHIC2Q9UKJ5 165 aa23.77■■□□□ 1.4
ERCC2-210ENST00000587376 THEMISQ8N1K5 641 aaPredicted RBP23.76■■□□□ 1.39
ERCC2-210ENST00000587376 CEP152O94986 1710 aa23.74■■□□□ 1.39
ERCC2-210ENST00000587376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.73■■□□□ 1.392e-10■□□□□ 10.5
ERCC2-210ENST00000587376 MROH1Q8NDA8 1641 aa23.73■■□□□ 1.39
ERCC2-210ENST00000587376 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
ERCC2-210ENST00000587376 UGGT1Q9NYU2 1555 aa23.72■■□□□ 1.39
ERCC2-210ENST00000587376 POLR1AO95602 1720 aaPredicted RBP23.7■■□□□ 1.39
ERCC2-210ENST00000587376 ANKLE2Q86XL3 938 aa23.7■■□□□ 1.38
ERCC2-210ENST00000587376 SPATA31D1Q6ZQQ2 1576 aa23.69■■□□□ 1.38
ERCC2-210ENST00000587376 ERVK-7P63135 1459 aa23.68■■□□□ 1.38
ERCC2-210ENST00000587376 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.67■■□□□ 1.38
ERCC2-210ENST00000587376 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
ERCC2-210ENST00000587376 LTBP4Q8N2S1 1624 aa23.66■■□□□ 1.38
ERCC2-210ENST00000587376 ADGRL2O95490 1459 aa23.66■■□□□ 1.38
ERCC2-210ENST00000587376 IQSEC2Q5JU85 1478 aa23.66■■□□□ 1.38
ERCC2-210ENST00000587376 CFAP65Q6ZU64 1925 aaKnown RBP23.66■■□□□ 1.38
ERCC2-210ENST00000587376 ARHGAP31Q2M1Z3 1444 aa23.65■■□□□ 1.38
ERCC2-210ENST00000587376 ZNF335Q9H4Z2 1342 aaPredicted RBP23.64■■□□□ 1.38
ERCC2-210ENST00000587376 STAG3Q9UJ98 1225 aa23.59■■□□□ 1.37
ERCC2-210ENST00000587376 ANKRD50Q9ULJ7 1429 aa23.59■■□□□ 1.37
ERCC2-210ENST00000587376 NEURL4Q96JN8 1562 aa23.58■■□□□ 1.37
ERCC2-210ENST00000587376 LMTK2Q8IWU2 1503 aa23.58■■□□□ 1.36
ERCC2-210ENST00000587376 NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
ERCC2-210ENST00000587376 UBR1Q8IWV7 1749 aa23.55■■□□□ 1.36
ERCC2-210ENST00000587376 MED14O60244 1454 aa23.55■■□□□ 1.36
ERCC2-210ENST00000587376 PPARGC1BQ86YN6 1023 aaKnown RBP23.54■■□□□ 1.36
ERCC2-210ENST00000587376 VWDEQ8N2E2 1590 aa23.53■■□□□ 1.36
ERCC2-210ENST00000587376 EID1Q9Y6B2 187 aa23.53■■□□□ 1.36
ERCC2-210ENST00000587376 IQGAP1P46940 1657 aa23.53■■□□□ 1.36
ERCC2-210ENST00000587376 CPS1P31327 1500 aa23.53■■□□□ 1.36
ERCC2-210ENST00000587376 ITGAEP38570 1179 aa23.52■■□□□ 1.36
ERCC2-210ENST00000587376 ROCK1Q13464 1354 aa23.52■■□□□ 1.36
ERCC2-210ENST00000587376 EFCAB6Q5THR3 1501 aa23.51■■□□□ 1.35
ERCC2-210ENST00000587376 UBAP1LF5GYI3 381 aa23.5■■□□□ 1.35
ERCC2-210ENST00000587376 SCAF11Q99590 1463 aaKnown RBP23.49■■□□□ 1.35
ERCC2-210ENST00000587376 PIK3C2BO00750 1634 aa23.48■■□□□ 1.35
ERCC2-210ENST00000587376 TXNDC2Q86VQ3 553 aa23.48■■□□□ 1.35
ERCC2-210ENST00000587376 RPRD2Q5VT52 1461 aaKnown RBP23.47■■□□□ 1.35
ERCC2-210ENST00000587376 SLIT1O75093 1534 aa23.46■■□□□ 1.35
ERCC2-210ENST00000587376 KDM5AP29375 1690 aaKnown RBP23.45■■□□□ 1.34
ERCC2-210ENST00000587376 SLC52A1Q9NWF4 448 aa23.45■■□□□ 1.34
ERCC2-210ENST00000587376 TET3O43151 1660 aa23.44■■□□□ 1.34
ERCC2-210ENST00000587376 UNC13BO14795 1591 aa23.44■■□□□ 1.34
ERCC2-210ENST00000587376 ARHGAP23Q9P227 1491 aa23.43■■□□□ 1.34
ERCC2-210ENST00000587376 IDI1Q13907 227 aa23.43■■□□□ 1.34
ERCC2-210ENST00000587376 NOS1P29475 1434 aa23.42■■□□□ 1.34
ERCC2-210ENST00000587376 TMEM2Q9UHN6 1383 aa23.42■■□□□ 1.34
ERCC2-210ENST00000587376 GCC2Q8IWJ2 1684 aa23.42■■□□□ 1.34
ERCC2-210ENST00000587376 SYNMO15061 1565 aa23.42■■□□□ 1.34
ERCC2-210ENST00000587376 TOM1O60784 492 aa23.41■■□□□ 1.34
ERCC2-210ENST00000587376 SCAF1Q9H7N4 1312 aaKnown RBP23.4■■□□□ 1.34
ERCC2-210ENST00000587376 LTKP29376 864 aa23.39■■□□□ 1.33
ERCC2-210ENST00000587376 ADGRB3O60242 1522 aa23.38■■□□□ 1.33
ERCC2-210ENST00000587376 HDGFP51858 240 aaKnown RBP23.36■■□□□ 1.33
ERCC2-210ENST00000587376 NUP155O75694 1391 aa23.36■■□□□ 1.33
ERCC2-210ENST00000587376 IQGAP3Q86VI3 1631 aa23.35■■□□□ 1.33
ERCC2-210ENST00000587376 BCANQ96GW7 911 aa23.35■■□□□ 1.33
ERCC2-210ENST00000587376 RRBP1Q9P2E9 1410 aaKnown RBP23.33■■□□□ 1.33
ERCC2-210ENST00000587376 PIP4K2BP78356 416 aa23.33■■□□□ 1.33
ERCC2-210ENST00000587376 PPP1R15AO75807 674 aaPredicted RBP23.31■■□□□ 1.32
ERCC2-210ENST00000587376 CHGAP10645 457 aaKnown RBP23.31■■□□□ 1.32
ERCC2-210ENST00000587376 E9PCH4 1651 aa23.3■■□□□ 1.32
ERCC2-210ENST00000587376 LRRC7Q96NW7 1537 aa23.28■■□□□ 1.32
ERCC2-210ENST00000587376 STRCP1A6NGW2 1772 aa23.28■■□□□ 1.32
ERCC2-210ENST00000587376 DISP3Q9P2K9 1392 aa23.27■■□□□ 1.32
ERCC2-210ENST00000587376 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.26■■□□□ 1.31
ERCC2-210ENST00000587376 TMEM131LA2VDJ0 1609 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms