RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 CCDC141Q6ZP82 1450 aa22.96■■□□□ 1.27
CXXC1-208ENST00000587170 ARHGEF5Q12774 1597 aa22.96■■□□□ 1.27
CXXC1-208ENST00000587170 RNF17Q9BXT8 1623 aaKnown RBP22.94■■□□□ 1.26
CXXC1-208ENST00000587170 CAMSAP2Q08AD1 1489 aa22.94■■□□□ 1.26
CXXC1-208ENST00000587170 DHX29Q7Z478 1369 aaKnown RBP22.94■■□□□ 1.26
CXXC1-208ENST00000587170 ZNF644Q9H582 1327 aaPredicted RBP22.94■■□□□ 1.26
CXXC1-208ENST00000587170 GGT6Q6P531 493 aa22.94■■□□□ 1.26
CXXC1-208ENST00000587170 ZC3H13Q5T200 1668 aaKnown RBP22.93■■□□□ 1.26
CXXC1-208ENST00000587170 DEPDC5O75140 1603 aa22.93■■□□□ 1.26
CXXC1-208ENST00000587170 CPS1P31327 1500 aa22.92■■□□□ 1.26
CXXC1-208ENST00000587170 NCOA2Q15596 1464 aa22.9■■□□□ 1.26
CXXC1-208ENST00000587170 EIF2AK4Q9P2K8 1649 aaKnown RBP22.88■■□□□ 1.25
CXXC1-208ENST00000587170 VWDEQ8N2E2 1590 aa22.88■■□□□ 1.25
CXXC1-208ENST00000587170 MAST1Q9Y2H9 1570 aa22.88■■□□□ 1.25
CXXC1-208ENST00000587170 TNRQ92752 1358 aa22.87■■□□□ 1.25
CXXC1-208ENST00000587170 NLRP1Q9C000 1473 aa22.86■■□□□ 1.25
CXXC1-208ENST00000587170 IQGAP1P46940 1657 aa22.86■■□□□ 1.25
CXXC1-208ENST00000587170 UBAP1LF5GYI3 381 aa22.85■■□□□ 1.25
CXXC1-208ENST00000587170 MED14O60244 1454 aa22.84■■□□□ 1.25
CXXC1-208ENST00000587170 SHANK2Q9UPX8 1470 aa22.84■■□□□ 1.25
CXXC1-208ENST00000587170 STRCP1A6NGW2 1772 aa22.83■■□□□ 1.24
CXXC1-208ENST00000587170 UGGT1Q9NYU2 1555 aa22.82■■□□□ 1.24
CXXC1-208ENST00000587170 MROH1Q8NDA8 1641 aa22.82■■□□□ 1.24
CXXC1-208ENST00000587170 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
CXXC1-208ENST00000587170 MED1Q15648 1581 aaPredicted RBP22.81■■□□□ 1.24
CXXC1-208ENST00000587170 CEP152O94986 1710 aa22.8■■□□□ 1.24
CXXC1-208ENST00000587170 ABCC3O15438 1527 aa22.8■■□□□ 1.24
CXXC1-208ENST00000587170 SYNMO15061 1565 aa22.8■■□□□ 1.24
CXXC1-208ENST00000587170 RSPH4AQ5TD94 716 aa22.79■■□□□ 1.24
CXXC1-208ENST00000587170 KIF3BO15066 747 aa22.78■■□□□ 1.24
CXXC1-208ENST00000587170 UBR1Q8IWV7 1749 aa22.78■■□□□ 1.24
CXXC1-208ENST00000587170 MIA2Q96PC5 1412 aa22.78■■□□□ 1.24
CXXC1-208ENST00000587170 FBXO31Q5XUX0 539 aaPredicted RBP22.77■■□□□ 1.24
CXXC1-208ENST00000587170 CFAP65Q6ZU64 1925 aaKnown RBP22.76■■□□□ 1.23
CXXC1-208ENST00000587170 CROCC2H7BZ55 1655 aa22.75■■□□□ 1.23
CXXC1-208ENST00000587170 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.74■■□□□ 1.23
CXXC1-208ENST00000587170 LRRC9Q6ZRR7 1453 aa22.73■■□□□ 1.23
CXXC1-208ENST00000587170 WASHC2CQ9Y4E1 1318 aa22.73■■□□□ 1.23
CXXC1-208ENST00000587170 NPHP4O75161 1426 aaPredicted RBP22.73■■□□□ 1.23
CXXC1-208ENST00000587170 ERVK-7P63135 1459 aa22.71■■□□□ 1.23
CXXC1-208ENST00000587170 XIRP1Q702N8 1843 aaKnown RBP22.71■■□□□ 1.23
CXXC1-208ENST00000587170 MAP3K1Q13233 1512 aa22.7■■□□□ 1.22
CXXC1-208ENST00000587170 THEMISQ8N1K5 641 aaPredicted RBP22.69■■□□□ 1.22
CXXC1-208ENST00000587170 PRDM15P57071 1507 aaPredicted RBP22.68■■□□□ 1.22
CXXC1-208ENST00000587170 ANKLE2Q86XL3 938 aa22.68■■□□□ 1.22
CXXC1-208ENST00000587170 VPS8Q8N3P4 1428 aa22.67■■□□□ 1.22
CXXC1-208ENST00000587170 TOM1O60784 492 aa22.66■■□□□ 1.22
CXXC1-208ENST00000587170 HSPA1LP34931 641 aa22.66■■□□□ 1.22
CXXC1-208ENST00000587170 KDM5AP29375 1690 aaKnown RBP22.65■■□□□ 1.22
CXXC1-208ENST00000587170 LRRC7Q96NW7 1537 aa22.65■■□□□ 1.22
CXXC1-208ENST00000587170 DUOX2Q9NRD8 1548 aa22.65■■□□□ 1.22
CXXC1-208ENST00000587170 SLIT1O75093 1534 aa22.63■■□□□ 1.21
CXXC1-208ENST00000587170 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
CXXC1-208ENST00000587170 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
CXXC1-208ENST00000587170 MYOM3Q5VTT5 1437 aa22.62■■□□□ 1.21
CXXC1-208ENST00000587170 ARHGAP23Q9P227 1491 aa22.61■■□□□ 1.21
CXXC1-208ENST00000587170 PIP4K2BP78356 416 aa22.59■■□□□ 1.21
CXXC1-208ENST00000587170 SCAF11Q99590 1463 aaKnown RBP22.59■■□□□ 1.21
CXXC1-208ENST00000587170 ARHGAP31Q2M1Z3 1444 aa22.58■■□□□ 1.21
CXXC1-208ENST00000587170 PIK3C2BO00750 1634 aa22.58■■□□□ 1.21
CXXC1-208ENST00000587170 SCAF1Q9H7N4 1312 aaKnown RBP22.57■■□□□ 1.2
CXXC1-208ENST00000587170 ERBINQ96RT1 1412 aa22.56■■□□□ 1.2
CXXC1-208ENST00000587170 PTPN23Q9H3S7 1636 aa22.54■■□□□ 1.2
CXXC1-208ENST00000587170 LMTK2Q8IWU2 1503 aa22.49■■□□□ 1.19
CXXC1-208ENST00000587170 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
CXXC1-208ENST00000587170 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
CXXC1-208ENST00000587170 ABCC5O15440 1437 aa22.47■■□□□ 1.19
CXXC1-208ENST00000587170 EFCAB6Q5THR3 1501 aa22.44■■□□□ 1.18
CXXC1-208ENST00000587170 NWD1Q149M9 1564 aa22.43■■□□□ 1.18
CXXC1-208ENST00000587170 DAPK1P53355 1430 aa22.43■■□□□ 1.18
CXXC1-208ENST00000587170 MYO5BQ9ULV0 1848 aa22.43■■□□□ 1.18
CXXC1-208ENST00000587170 TET3O43151 1660 aa22.42■■□□□ 1.18
CXXC1-208ENST00000587170 LTKP29376 864 aa22.42■■□□□ 1.18
CXXC1-208ENST00000587170 ADGRB3O60242 1522 aa22.41■■□□□ 1.18
CXXC1-208ENST00000587170 TMEM2Q9UHN6 1383 aa22.4■■□□□ 1.18
CXXC1-208ENST00000587170 ROBO1Q9Y6N7 1651 aa22.39■■□□□ 1.18
CXXC1-208ENST00000587170 FGD6Q6ZV73 1430 aa22.38■■□□□ 1.17
CXXC1-208ENST00000587170 PHF23Q9BUL5 403 aaPredicted RBP22.37■■□□□ 1.17
CXXC1-208ENST00000587170 TXNDC2Q86VQ3 553 aa22.36■■□□□ 1.17
CXXC1-208ENST00000587170 CHD2O14647 1828 aaKnown RBP22.36■■□□□ 1.17
CXXC1-208ENST00000587170 NKTRP30414 1462 aaKnown RBP22.35■■□□□ 1.17
CXXC1-208ENST00000587170 NOS1P29475 1434 aa22.35■■□□□ 1.17
CXXC1-208ENST00000587170 FAM135BQ49AJ0 1406 aa22.35■■□□□ 1.17
CXXC1-208ENST00000587170 KANK1Q14678 1352 aa22.35■■□□□ 1.17
CXXC1-208ENST00000587170 GCC2Q8IWJ2 1684 aa22.34■■□□□ 1.17
CXXC1-208ENST00000587170 ADGRL2O95490 1459 aa22.34■■□□□ 1.17
CXXC1-208ENST00000587170 EID1Q9Y6B2 187 aa22.33■■□□□ 1.17
CXXC1-208ENST00000587170 RPRD2Q5VT52 1461 aaKnown RBP22.3■■□□□ 1.16
CXXC1-208ENST00000587170 RRP7BPQ9NSQ0 103 aa22.3■■□□□ 1.16
CXXC1-208ENST00000587170 ANKRD30AQ9BXX3 1397 aa22.29■■□□□ 1.16
CXXC1-208ENST00000587170 LOC105371045A0A1W2PR82 267 aa22.29■■□□□ 1.16
CXXC1-208ENST00000587170 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
CXXC1-208ENST00000587170 TMEM131LA2VDJ0 1609 aa22.28■■□□□ 1.16
CXXC1-208ENST00000587170 PHLPP1O60346 1717 aa22.27■■□□□ 1.16
CXXC1-208ENST00000587170 UNC13BO14795 1591 aa22.26■■□□□ 1.15
CXXC1-208ENST00000587170 RGS17Q9UGC6 210 aaPredicted RBP22.26■■□□□ 1.15
CXXC1-208ENST00000587170 IDI1Q13907 227 aa22.25■■□□□ 1.15
CXXC1-208ENST00000587170 ZFYVE9O95405 1425 aa22.24■■□□□ 1.15
CXXC1-208ENST00000587170 KCNA6P17658 529 aa22.24■■□□□ 1.15
CXXC1-208ENST00000587170 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms