RNA–Protein interactions for RNA: ENST00000586913.1

RFX1-202, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-202ENST00000586913 EIF2AK4Q9P2K8 1649 aaKnown RBP26.52■■□□□ 1.84
RFX1-202ENST00000586913 KIF15Q9NS87 1388 aa26.5■■□□□ 1.83
RFX1-202ENST00000586913 RNF17Q9BXT8 1623 aaKnown RBP26.5■■□□□ 1.83
RFX1-202ENST00000586913 KDM5DQ9BY66 1539 aa26.49■■□□□ 1.83
RFX1-202ENST00000586913 PTPRKQ15262 1439 aa26.49■■□□□ 1.83
RFX1-202ENST00000586913 WASHC2CQ9Y4E1 1318 aa26.48■■□□□ 1.83
RFX1-202ENST00000586913 FAM50AQ14320 339 aaKnown RBP26.48■■□□□ 1.83
RFX1-202ENST00000586913 ERBINQ96RT1 1412 aa26.48■■□□□ 1.83
RFX1-202ENST00000586913 ANKRD30AQ9BXX3 1397 aa26.47■■□□□ 1.83
RFX1-202ENST00000586913 RRP7BPQ9NSQ0 103 aa26.46■■□□□ 1.83
RFX1-202ENST00000586913 NCOA1Q15788 1441 aa26.45■■□□□ 1.82
RFX1-202ENST00000586913 ADGRL2O95490 1459 aa26.44■■□□□ 1.82
RFX1-202ENST00000586913 PZPP20742 1482 aa26.42■■□□□ 1.82
RFX1-202ENST00000586913 CHIC2Q9UKJ5 165 aa26.41■■□□□ 1.82
RFX1-202ENST00000586913 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.4■■□□□ 1.82
RFX1-202ENST00000586913 MROH1Q8NDA8 1641 aa26.39■■□□□ 1.82
RFX1-202ENST00000586913 ZC3H13Q5T200 1668 aaKnown RBP26.39■■□□□ 1.82
RFX1-202ENST00000586913 ABCC3O15438 1527 aa26.39■■□□□ 1.81
RFX1-202ENST00000586913 PRDM15P57071 1507 aaPredicted RBP26.35■■□□□ 1.81
RFX1-202ENST00000586913 PPARGC1BQ86YN6 1023 aaKnown RBP26.35■■□□□ 1.81
RFX1-202ENST00000586913 DMRT2Q9Y5R5 561 aa26.35■■□□□ 1.81
RFX1-202ENST00000586913 MYO3AQ8NEV4 1616 aa26.34■■□□□ 1.81
RFX1-202ENST00000586913 TNRQ92752 1358 aa26.33■■□□□ 1.81
RFX1-202ENST00000586913 FBXO31Q5XUX0 539 aaPredicted RBP26.33■■□□□ 1.81
RFX1-202ENST00000586913 DEPDC5O75140 1603 aa26.32■■□□□ 1.8
RFX1-202ENST00000586913 ZNF142P52746 1687 aaPredicted RBP26.32■■□□□ 1.8
RFX1-202ENST00000586913 CEP170BQ9Y4F5 1589 aaPredicted RBP26.32■■□□□ 1.8
RFX1-202ENST00000586913 ROCK1Q13464 1354 aa26.31■■□□□ 1.8
RFX1-202ENST00000586913 STRCQ7RTU9 1775 aa26.3■■□□□ 1.8
RFX1-202ENST00000586913 A2ML1A8K2U0 1454 aa26.3■■□□□ 1.8
RFX1-202ENST00000586913 KANK1Q14678 1352 aa26.28■■□□□ 1.8
RFX1-202ENST00000586913 ARHGAP31Q2M1Z3 1444 aa26.28■■□□□ 1.8
RFX1-202ENST00000586913 ANKRD50Q9ULJ7 1429 aa26.28■■□□□ 1.8
RFX1-202ENST00000586913 PLA2R1Q13018 1463 aa26.27■■□□□ 1.8
RFX1-202ENST00000586913 CAMSAP1Q5T5Y3 1602 aa26.26■■□□□ 1.79
RFX1-202ENST00000586913 SPATA31D1Q6ZQQ2 1576 aa26.26■■□□□ 1.79
RFX1-202ENST00000586913 PTPRTO14522 1441 aa26.26■■□□□ 1.79
RFX1-202ENST00000586913 RRBP1Q9P2E9 1410 aaKnown RBP26.26■■□□□ 1.79
RFX1-202ENST00000586913 NLRP1Q9C000 1473 aa26.25■■□□□ 1.79
RFX1-202ENST00000586913 CEP152O94986 1710 aa26.25■■□□□ 1.79
RFX1-202ENST00000586913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.24■■□□□ 1.79
RFX1-202ENST00000586913 VWDEQ8N2E2 1590 aa26.24■■□□□ 1.79
RFX1-202ENST00000586913 LMTK2Q8IWU2 1503 aa26.24■■□□□ 1.79
RFX1-202ENST00000586913 ERVK-7P63135 1459 aa26.23■■□□□ 1.79
RFX1-202ENST00000586913 PKD2Q13563 968 aa26.21■■□□□ 1.79
RFX1-202ENST00000586913 THEMISQ8N1K5 641 aaPredicted RBP26.16■■□□□ 1.78
RFX1-202ENST00000586913 ITGAEP38570 1179 aa26.15■■□□□ 1.78
RFX1-202ENST00000586913 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.78
RFX1-202ENST00000586913 UGGT1Q9NYU2 1555 aa26.14■■□□□ 1.78
RFX1-202ENST00000586913 EFCAB6Q5THR3 1501 aa26.11■■□□□ 1.77
RFX1-202ENST00000586913 UNC13BO14795 1591 aa26.11■■□□□ 1.77
RFX1-202ENST00000586913 ILDR1Q86SU0 546 aaPredicted RBP26.1■■□□□ 1.77
RFX1-202ENST00000586913 RPRD2Q5VT52 1461 aaKnown RBP26.08■■□□□ 1.77
RFX1-202ENST00000586913 CFAP65Q6ZU64 1925 aaKnown RBP26.08■■□□□ 1.76
RFX1-202ENST00000586913 ANKLE2Q86XL3 938 aa26.07■■□□□ 1.76
RFX1-202ENST00000586913 NOS1P29475 1434 aa26.06■■□□□ 1.76
RFX1-202ENST00000586913 CERKQ8TCT0 537 aa26.06■■□□□ 1.76
RFX1-202ENST00000586913 FBXO41Q8TF61 875 aa26.05■■□□□ 1.76
RFX1-202ENST00000586913 TET3O43151 1660 aa26.04■■□□□ 1.76
RFX1-202ENST00000586913 POLR1AO95602 1720 aaPredicted RBP26.01■■□□□ 1.75
RFX1-202ENST00000586913 UBR1Q8IWV7 1749 aa26■■□□□ 1.75
RFX1-202ENST00000586913 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
RFX1-202ENST00000586913 MED14O60244 1454 aa26■■□□□ 1.75
RFX1-202ENST00000586913 NUP155O75694 1391 aa26■■□□□ 1.75
RFX1-202ENST00000586913 SLC52A1Q9NWF4 448 aa26■■□□□ 1.75
RFX1-202ENST00000586913 IQGAP3Q86VI3 1631 aa25.99■■□□□ 1.75
RFX1-202ENST00000586913 LTBP4Q8N2S1 1624 aa25.99■■□□□ 1.75
RFX1-202ENST00000586913 IDI1Q13907 227 aa25.99■■□□□ 1.75
RFX1-202ENST00000586913 GCC2Q8IWJ2 1684 aa25.99■■□□□ 1.75
RFX1-202ENST00000586913 NAIPQ13075 1403 aa25.98■■□□□ 1.75
RFX1-202ENST00000586913 SYNMO15061 1565 aa25.98■■□□□ 1.75
RFX1-202ENST00000586913 KDM5AP29375 1690 aaKnown RBP25.97■■□□□ 1.75
RFX1-202ENST00000586913 ARHGAP23Q9P227 1491 aa25.97■■□□□ 1.75
RFX1-202ENST00000586913 SLIT1O75093 1534 aa25.96■■□□□ 1.75
RFX1-202ENST00000586913 HFM1A2PYH4 1435 aa25.95■■□□□ 1.74
RFX1-202ENST00000586913 NPHP4O75161 1426 aaPredicted RBP25.95■■□□□ 1.74
RFX1-202ENST00000586913 PIK3C2BO00750 1634 aa25.95■■□□□ 1.74
RFX1-202ENST00000586913 ZNF335Q9H4Z2 1342 aaPredicted RBP25.92■■□□□ 1.74
RFX1-202ENST00000586913 STAG3Q9UJ98 1225 aa25.92■■□□□ 1.74
RFX1-202ENST00000586913 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
RFX1-202ENST00000586913 TMEM2Q9UHN6 1383 aa25.91■■□□□ 1.74
RFX1-202ENST00000586913 SCAF11Q99590 1463 aaKnown RBP25.91■■□□□ 1.74
RFX1-202ENST00000586913 E9PCH4 1651 aa25.9■■□□□ 1.74
RFX1-202ENST00000586913 TXNDC2Q86VQ3 553 aa25.88■■□□□ 1.73
RFX1-202ENST00000586913 EID1Q9Y6B2 187 aa25.88■■□□□ 1.73
RFX1-202ENST00000586913 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
RFX1-202ENST00000586913 LTKP29376 864 aa25.87■■□□□ 1.73
RFX1-202ENST00000586913 IQGAP1P46940 1657 aa25.87■■□□□ 1.73
RFX1-202ENST00000586913 CPS1P31327 1500 aa25.81■■□□□ 1.72
RFX1-202ENST00000586913 TMEM131LA2VDJ0 1609 aa25.77■■□□□ 1.72
RFX1-202ENST00000586913 HDGFP51858 240 aaKnown RBP25.77■■□□□ 1.72
RFX1-202ENST00000586913 ZFYVE9O95405 1425 aa25.75■■□□□ 1.71
RFX1-202ENST00000586913 TRIM52Q96A61 297 aa25.75■■□□□ 1.71
RFX1-202ENST00000586913 ACIN1Q9UKV3 1341 aaKnown RBP25.73■■□□□ 1.71
RFX1-202ENST00000586913 SPHKAPQ2M3C7 1700 aa25.72■■□□□ 1.71
RFX1-202ENST00000586913 RIMS2Q9UQ26 1411 aa25.71■■□□□ 1.71
RFX1-202ENST00000586913 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
RFX1-202ENST00000586913 CHGAP10645 457 aaKnown RBP25.7■■□□□ 1.7
RFX1-202ENST00000586913 SLC4A1APQ9BWU0 796 aaKnown RBP25.69■■□□□ 1.7
RFX1-202ENST00000586913 MYO5BQ9ULV0 1848 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms