RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 FAM135AQ9P2D6 1515 aa22.22■■□□□ 1.15
ATG4D-206ENST00000586863 TCOF1Q13428 1488 aaKnown RBP22.22■■□□□ 1.15
ATG4D-206ENST00000586863 MAST1Q9Y2H9 1570 aa22.21■■□□□ 1.15
ATG4D-206ENST00000586863 A2ML1A8K2U0 1454 aa22.2■■□□□ 1.14
ATG4D-206ENST00000586863 PZPP20742 1482 aa22.2■■□□□ 1.14
ATG4D-206ENST00000586863 DNMT1P26358 1616 aaKnown RBP22.2■■□□□ 1.14
ATG4D-206ENST00000586863 MYOM3Q5VTT5 1437 aa22.18■■□□□ 1.14
ATG4D-206ENST00000586863 TSPY4P0CV99 314 aa22.18■■□□□ 1.14
ATG4D-206ENST00000586863 TSPY10P0CW01 314 aa22.18■■□□□ 1.14
ATG4D-206ENST00000586863 RNF17Q9BXT8 1623 aaKnown RBP22.17■■□□□ 1.14
ATG4D-206ENST00000586863 FBXO31Q5XUX0 539 aaPredicted RBP22.17■■□□□ 1.14
ATG4D-206ENST00000586863 TNRQ92752 1358 aa22.16■■□□□ 1.14
ATG4D-206ENST00000586863 PKD2Q13563 968 aa22.16■■□□□ 1.14
ATG4D-206ENST00000586863 MIA2Q96PC5 1412 aa22.15■■□□□ 1.14
ATG4D-206ENST00000586863 WASHC2CQ9Y4E1 1318 aa22.15■■□□□ 1.14
ATG4D-206ENST00000586863 IQSEC2Q5JU85 1478 aa22.15■■□□□ 1.14
ATG4D-206ENST00000586863 ZNF335Q9H4Z2 1342 aaPredicted RBP22.14■■□□□ 1.14
ATG4D-206ENST00000586863 POLR1AO95602 1720 aaPredicted RBP22.13■■□□□ 1.13
ATG4D-206ENST00000586863 EIF2AK4Q9P2K8 1649 aaKnown RBP22.13■■□□□ 1.13
ATG4D-206ENST00000586863 ABCC3O15438 1527 aa22.11■■□□□ 1.13
ATG4D-206ENST00000586863 ZC3H13Q5T200 1668 aaKnown RBP22.11■■□□□ 1.13
ATG4D-206ENST00000586863 MROH1Q8NDA8 1641 aa22.1■■□□□ 1.13
ATG4D-206ENST00000586863 NEURL4Q96JN8 1562 aa22.1■■□□□ 1.13
ATG4D-206ENST00000586863 CROCC2H7BZ55 1655 aa22.08■■□□□ 1.13
ATG4D-206ENST00000586863 PTPN23Q9H3S7 1636 aa22.06■■□□□ 1.12
ATG4D-206ENST00000586863 CEP152O94986 1710 aa22.06■■□□□ 1.12
ATG4D-206ENST00000586863 NLRP1Q9C000 1473 aa22.06■■□□□ 1.12
ATG4D-206ENST00000586863 DUOX2Q9NRD8 1548 aa22.05■■□□□ 1.12
ATG4D-206ENST00000586863 SPATA31D1Q6ZQQ2 1576 aa22.04■■□□□ 1.12
ATG4D-206ENST00000586863 SHANK2Q9UPX8 1470 aa22.04■■□□□ 1.12
ATG4D-206ENST00000586863 CFAP65Q6ZU64 1925 aaKnown RBP22.04■■□□□ 1.12
ATG4D-206ENST00000586863 UGGT1Q9NYU2 1555 aa22.04■■□□□ 1.12
ATG4D-206ENST00000586863 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.03■■□□□ 1.12
ATG4D-206ENST00000586863 ABCC5O15440 1437 aa22.03■■□□□ 1.12
ATG4D-206ENST00000586863 ERVK-7P63135 1459 aa22.02■■□□□ 1.12
ATG4D-206ENST00000586863 KIF15Q9NS87 1388 aa22■■□□□ 1.11
ATG4D-206ENST00000586863 APLP2Q06481 763 aa22■■□□□ 1.11
ATG4D-206ENST00000586863 FGD6Q6ZV73 1430 aa21.99■■□□□ 1.11
ATG4D-206ENST00000586863 PRDM15P57071 1507 aaPredicted RBP21.99■■□□□ 1.11
ATG4D-206ENST00000586863 DAPK1P53355 1430 aa21.98■■□□□ 1.11
ATG4D-206ENST00000586863 DEPDC5O75140 1603 aa21.98■■□□□ 1.11
ATG4D-206ENST00000586863 THEMISQ8N1K5 641 aaPredicted RBP21.97■■□□□ 1.11
ATG4D-206ENST00000586863 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
ATG4D-206ENST00000586863 UBAP1LF5GYI3 381 aa21.96■■□□□ 1.11
ATG4D-206ENST00000586863 ANKLE2Q86XL3 938 aa21.96■■□□□ 1.11
ATG4D-206ENST00000586863 VWDEQ8N2E2 1590 aa21.95■■□□□ 1.11
ATG4D-206ENST00000586863 MED14O60244 1454 aa21.95■■□□□ 1.1
ATG4D-206ENST00000586863 RRP7BPQ9NSQ0 103 aa21.94■■□□□ 1.1
ATG4D-206ENST00000586863 DISP3Q9P2K9 1392 aa21.94■■□□□ 1.1
ATG4D-206ENST00000586863 NPHP4O75161 1426 aaPredicted RBP21.94■■□□□ 1.1
ATG4D-206ENST00000586863 CPS1P31327 1500 aa21.94■■□□□ 1.1
ATG4D-206ENST00000586863 IQGAP1P46940 1657 aa21.94■■□□□ 1.1
ATG4D-206ENST00000586863 UBR1Q8IWV7 1749 aa21.93■■□□□ 1.1
ATG4D-206ENST00000586863 ARHGAP31Q2M1Z3 1444 aa21.9■■□□□ 1.1
ATG4D-206ENST00000586863 STRCP1A6NGW2 1772 aa21.87■■□□□ 1.09
ATG4D-206ENST00000586863 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.87■■□□□ 1.09
ATG4D-206ENST00000586863 CHIC2Q9UKJ5 165 aa21.87■■□□□ 1.09
ATG4D-206ENST00000586863 ANKRD30AQ9BXX3 1397 aa21.87■■□□□ 1.09
ATG4D-206ENST00000586863 ILDR2Q71H61 639 aa21.85■■□□□ 1.09
ATG4D-206ENST00000586863 PIK3C2BO00750 1634 aa21.84■■□□□ 1.09
ATG4D-206ENST00000586863 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.09
ATG4D-206ENST00000586863 LMTK2Q8IWU2 1503 aa21.83■■□□□ 1.09
ATG4D-206ENST00000586863 ARHGAP23Q9P227 1491 aa21.83■■□□□ 1.08
ATG4D-206ENST00000586863 SLIT1O75093 1534 aa21.82■■□□□ 1.08
ATG4D-206ENST00000586863 KANK1Q14678 1352 aa21.82■■□□□ 1.08
ATG4D-206ENST00000586863 ADGRL2O95490 1459 aa21.82■■□□□ 1.08
ATG4D-206ENST00000586863 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
ATG4D-206ENST00000586863 SCAF1Q9H7N4 1312 aaKnown RBP21.79■■□□□ 1.08
ATG4D-206ENST00000586863 SYNMO15061 1565 aa21.78■■□□□ 1.08
ATG4D-206ENST00000586863 LTKP29376 864 aa21.78■■□□□ 1.08
ATG4D-206ENST00000586863 PIP4K2BP78356 416 aa21.78■■□□□ 1.08
ATG4D-206ENST00000586863 FAM50AQ14320 339 aaKnown RBP21.78■■□□□ 1.08
ATG4D-206ENST00000586863 EFCAB6Q5THR3 1501 aa21.78■■□□□ 1.08
ATG4D-206ENST00000586863 LRRC7Q96NW7 1537 aa21.77■■□□□ 1.08
ATG4D-206ENST00000586863 TOM1O60784 492 aa21.77■■□□□ 1.08
ATG4D-206ENST00000586863 KDM5AP29375 1690 aaKnown RBP21.75■■□□□ 1.07
ATG4D-206ENST00000586863 HSPA1LP34931 641 aa21.75■■□□□ 1.07
ATG4D-206ENST00000586863 TXNDC2Q86VQ3 553 aa21.75■■□□□ 1.07
ATG4D-206ENST00000586863 TMEM2Q9UHN6 1383 aa21.74■■□□□ 1.07
ATG4D-206ENST00000586863 NOS1P29475 1434 aa21.73■■□□□ 1.07
ATG4D-206ENST00000586863 ANKRD50Q9ULJ7 1429 aa21.72■■□□□ 1.07
ATG4D-206ENST00000586863 IDI1Q13907 227 aa21.71■■□□□ 1.07
ATG4D-206ENST00000586863 EID1Q9Y6B2 187 aa21.7■■□□□ 1.06
ATG4D-206ENST00000586863 XIRP1Q702N8 1843 aaKnown RBP21.7■■□□□ 1.06
ATG4D-206ENST00000586863 ADGRB3O60242 1522 aa21.7■■□□□ 1.06
ATG4D-206ENST00000586863 STAG3Q9UJ98 1225 aa21.69■■□□□ 1.06
ATG4D-206ENST00000586863 TET3O43151 1660 aa21.67■■□□□ 1.06
ATG4D-206ENST00000586863 UNC13BO14795 1591 aa21.66■■□□□ 1.06
ATG4D-206ENST00000586863 SOCS7O14512 581 aa21.66■■□□□ 1.06
ATG4D-206ENST00000586863 MED1Q15648 1581 aaPredicted RBP21.65■■□□□ 1.06
ATG4D-206ENST00000586863 RPRD2Q5VT52 1461 aaKnown RBP21.65■■□□□ 1.06
ATG4D-206ENST00000586863 MYO5BQ9ULV0 1848 aa21.65■■□□□ 1.06
ATG4D-206ENST00000586863 GCC2Q8IWJ2 1684 aa21.64■■□□□ 1.05
ATG4D-206ENST00000586863 SLC52A1Q9NWF4 448 aa21.61■■□□□ 1.05
ATG4D-206ENST00000586863 ROCK1Q13464 1354 aa21.6■■□□□ 1.05
ATG4D-206ENST00000586863 E9PCH4 1651 aa21.59■■□□□ 1.05
ATG4D-206ENST00000586863 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
ATG4D-206ENST00000586863 ZFYVE9O95405 1425 aa21.57■■□□□ 1.04
ATG4D-206ENST00000586863 SLC26A8Q96RN1 970 aa21.57■■□□□ 1.04
ATG4D-206ENST00000586863 TMEM131LA2VDJ0 1609 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms