RNA–Protein interactions for RNA: ENST00000586555.2

CIRBP-209, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-209ENST00000586555 FAM135AQ9P2D6 1515 aa31.93■■■□□ 2.7
CIRBP-209ENST00000586555 CEP170BQ9Y4F5 1589 aaPredicted RBP31.93■■■□□ 2.7
CIRBP-209ENST00000586555 MAST1Q9Y2H9 1570 aa31.91■■■□□ 2.7
CIRBP-209ENST00000586555 PTPN23Q9H3S7 1636 aa31.91■■■□□ 2.7
CIRBP-209ENST00000586555 FGD6Q6ZV73 1430 aa31.91■■■□□ 2.7
CIRBP-209ENST00000586555 PLA2R1Q13018 1463 aa31.91■■■□□ 2.7
CIRBP-209ENST00000586555 LTBP4Q8N2S1 1624 aa31.89■■■□□ 2.7
CIRBP-209ENST00000586555 NCKAP5LQ9HCH0 1330 aa31.89■■■□□ 2.7
CIRBP-209ENST00000586555 KDM5DQ9BY66 1539 aa31.89■■■□□ 2.7
CIRBP-209ENST00000586555 WASHC2CQ9Y4E1 1318 aa31.86■■■□□ 2.69
CIRBP-209ENST00000586555 PKD2Q13563 968 aa31.86■■■□□ 2.69
CIRBP-209ENST00000586555 FBXO31Q5XUX0 539 aaPredicted RBP31.86■■■□□ 2.69
CIRBP-209ENST00000586555 TCOF1Q13428 1488 aaKnown RBP31.85■■■□□ 2.69
CIRBP-209ENST00000586555 A2ML1A8K2U0 1454 aa31.84■■■□□ 2.69
CIRBP-209ENST00000586555 PZPP20742 1482 aa31.84■■■□□ 2.69
CIRBP-209ENST00000586555 DNMT1P26358 1616 aaKnown RBP31.82■■■□□ 2.68
CIRBP-209ENST00000586555 TNRQ92752 1358 aa31.81■■■□□ 2.68
CIRBP-209ENST00000586555 RNF17Q9BXT8 1623 aaKnown RBP31.79■■■□□ 2.68
CIRBP-209ENST00000586555 ABCC5O15440 1437 aa31.77■■■□□ 2.68
CIRBP-209ENST00000586555 IQSEC2Q5JU85 1478 aa31.77■■■□□ 2.68
CIRBP-209ENST00000586555 SHANK2Q9UPX8 1470 aa31.77■■■□□ 2.68
CIRBP-209ENST00000586555 DAPK1P53355 1430 aa31.75■■■□□ 2.67
CIRBP-209ENST00000586555 EIF2AK4Q9P2K8 1649 aaKnown RBP31.75■■■□□ 2.67
CIRBP-209ENST00000586555 FAM50AQ14320 339 aaKnown RBP31.75■■■□□ 2.67
CIRBP-209ENST00000586555 CROCC2H7BZ55 1655 aa31.73■■■□□ 2.67
CIRBP-209ENST00000586555 ZNF335Q9H4Z2 1342 aaPredicted RBP31.72■■■□□ 2.67
CIRBP-209ENST00000586555 ABCC3O15438 1527 aa31.7■■■□□ 2.67
CIRBP-209ENST00000586555 MROH1Q8NDA8 1641 aa31.7■■■□□ 2.66
CIRBP-209ENST00000586555 DUOX2Q9NRD8 1548 aa31.7■■■□□ 2.66
CIRBP-209ENST00000586555 ZC3H13Q5T200 1668 aaKnown RBP31.69■■■□□ 2.66
CIRBP-209ENST00000586555 NLRP1Q9C000 1473 aa31.68■■■□□ 2.66
CIRBP-209ENST00000586555 RRP7BPQ9NSQ0 103 aa31.67■■■□□ 2.66
CIRBP-209ENST00000586555 ANKRD30AQ9BXX3 1397 aa31.67■■■□□ 2.66
CIRBP-209ENST00000586555 KIF15Q9NS87 1388 aa31.67■■■□□ 2.66
CIRBP-209ENST00000586555 PPARGC1BQ86YN6 1023 aaKnown RBP31.66■■■□□ 2.66
CIRBP-209ENST00000586555 THEMISQ8N1K5 641 aaPredicted RBP31.64■■■□□ 2.66
CIRBP-209ENST00000586555 CHIC2Q9UKJ5 165 aa31.64■■■□□ 2.66
CIRBP-209ENST00000586555 POLR1AO95602 1720 aaPredicted RBP31.63■■■□□ 2.65
CIRBP-209ENST00000586555 SPATA31D1Q6ZQQ2 1576 aa31.63■■■□□ 2.65
CIRBP-209ENST00000586555 NEURL4Q96JN8 1562 aa31.63■■■□□ 2.65
CIRBP-209ENST00000586555 UGGT1Q9NYU2 1555 aa31.6■■■□□ 2.65
CIRBP-209ENST00000586555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.6■■■□□ 2.65
CIRBP-209ENST00000586555 ERBINQ96RT1 1412 aa31.59■■■□□ 2.65
CIRBP-209ENST00000586555 CEP152O94986 1710 aa31.59■■■□□ 2.65
CIRBP-209ENST00000586555 CFAP65Q6ZU64 1925 aaKnown RBP31.59■■■□□ 2.65
CIRBP-209ENST00000586555 ANKLE2Q86XL3 938 aa31.58■■■□□ 2.65
CIRBP-209ENST00000586555 ERVK-7P63135 1459 aa31.58■■■□□ 2.65
CIRBP-209ENST00000586555 PRDM15P57071 1507 aaPredicted RBP31.54■■■□□ 2.64
CIRBP-209ENST00000586555 MED14O60244 1454 aa31.53■■■□□ 2.64
CIRBP-209ENST00000586555 DEPDC5O75140 1603 aa31.53■■■□□ 2.64
CIRBP-209ENST00000586555 ADGRL2O95490 1459 aa31.52■■■□□ 2.64
CIRBP-209ENST00000586555 ARHGAP31Q2M1Z3 1444 aa31.52■■■□□ 2.64
CIRBP-209ENST00000586555 NPHP4O75161 1426 aaPredicted RBP31.47■■■□□ 2.63
CIRBP-209ENST00000586555 KANK1Q14678 1352 aa31.46■■■□□ 2.63
CIRBP-209ENST00000586555 UBAP1LF5GYI3 381 aa31.46■■■□□ 2.63
CIRBP-209ENST00000586555 CPS1P31327 1500 aa31.44■■■□□ 2.62
CIRBP-209ENST00000586555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.44■■■□□ 2.621e-19■□□□□ 10
CIRBP-209ENST00000586555 VWDEQ8N2E2 1590 aa31.43■■■□□ 2.62
CIRBP-209ENST00000586555 UBR1Q8IWV7 1749 aa31.43■■■□□ 2.62
CIRBP-209ENST00000586555 ITGAEP38570 1179 aa31.41■■■□□ 2.62
CIRBP-209ENST00000586555 ROCK1Q13464 1354 aa31.4■■■□□ 2.62
CIRBP-209ENST00000586555 LMTK2Q8IWU2 1503 aa31.39■■■□□ 2.62
CIRBP-209ENST00000586555 IQGAP1P46940 1657 aa31.39■■■□□ 2.62
CIRBP-209ENST00000586555 ANKRD50Q9ULJ7 1429 aa31.39■■■□□ 2.62
CIRBP-209ENST00000586555 RRBP1Q9P2E9 1410 aaKnown RBP31.35■■■□□ 2.61
CIRBP-209ENST00000586555 ARHGAP23Q9P227 1491 aa31.34■■■□□ 2.61
CIRBP-209ENST00000586555 SLIT1O75093 1534 aa31.34■■■□□ 2.61
CIRBP-209ENST00000586555 DISP3Q9P2K9 1392 aa31.31■■■□□ 2.6
CIRBP-209ENST00000586555 LTKP29376 864 aa31.31■■■□□ 2.6
CIRBP-209ENST00000586555 SCAF11Q99590 1463 aaKnown RBP31.3■■■□□ 2.6
CIRBP-209ENST00000586555 STRCP1A6NGW2 1772 aa31.29■■■□□ 2.6
CIRBP-209ENST00000586555 PIK3C2BO00750 1634 aa31.28■■■□□ 2.6
CIRBP-209ENST00000586555 TOM1O60784 492 aa31.28■■■□□ 2.6
CIRBP-209ENST00000586555 TXNDC2Q86VQ3 553 aa31.27■■■□□ 2.6
CIRBP-209ENST00000586555 IDI1Q13907 227 aa31.26■■■□□ 2.59
CIRBP-209ENST00000586555 KDM5AP29375 1690 aaKnown RBP31.25■■■□□ 2.59
CIRBP-209ENST00000586555 NOS1P29475 1434 aa31.24■■■□□ 2.59
CIRBP-209ENST00000586555 EFCAB6Q5THR3 1501 aa31.24■■■□□ 2.59
CIRBP-209ENST00000586555 TMEM2Q9UHN6 1383 aa31.23■■■□□ 2.59
CIRBP-209ENST00000586555 SYNMO15061 1565 aa31.22■■■□□ 2.59
CIRBP-209ENST00000586555 LRRC7Q96NW7 1537 aa31.21■■■□□ 2.59
CIRBP-209ENST00000586555 EID1Q9Y6B2 187 aa31.21■■■□□ 2.59
CIRBP-209ENST00000586555 ILDR2Q71H61 639 aa31.2■■■□□ 2.59
CIRBP-209ENST00000586555 ALKQ9UM73 1620 aa31.2■■■□□ 2.58
CIRBP-209ENST00000586555 STAG3Q9UJ98 1225 aa31.18■■■□□ 2.58
CIRBP-209ENST00000586555 PIP4K2BP78356 416 aa31.17■■■□□ 2.58
CIRBP-209ENST00000586555 UNC13BO14795 1591 aa31.16■■■□□ 2.58
CIRBP-209ENST00000586555 RPRD2Q5VT52 1461 aaKnown RBP31.15■■■□□ 2.58
CIRBP-209ENST00000586555 SLC52A1Q9NWF4 448 aa31.15■■■□□ 2.58
CIRBP-209ENST00000586555 HSPA1LP34931 641 aa31.14■■■□□ 2.58
CIRBP-209ENST00000586555 SCAF1Q9H7N4 1312 aaKnown RBP31.13■■■□□ 2.57
CIRBP-209ENST00000586555 TET3O43151 1660 aa31.11■■■□□ 2.57
CIRBP-209ENST00000586555 ADGRB3O60242 1522 aa31.09■■■□□ 2.57
CIRBP-209ENST00000586555 NUP155O75694 1391 aa31.09■■■□□ 2.57
CIRBP-209ENST00000586555 GCC2Q8IWJ2 1684 aa31.06■■■□□ 2.56
CIRBP-209ENST00000586555 XIRP1Q702N8 1843 aaKnown RBP31.05■■■□□ 2.56
CIRBP-209ENST00000586555 IQGAP3Q86VI3 1631 aa31.05■■■□□ 2.56
CIRBP-209ENST00000586555 NAIPQ13075 1403 aa31.02■■■□□ 2.56
CIRBP-209ENST00000586555 KCNA6P17658 529 aa31■■■□□ 2.55
CIRBP-209ENST00000586555 MYO5BQ9ULV0 1848 aa31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms