RNA–Protein interactions for RNA: ENST00000586055.2

PALM-203, Transcript of paralemmin, humanhuman

TSL 4

Gene PALM, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALM-203ENST00000586055 NCOA1Q15788 1441 aa43.98■■■■■ 4.63
PALM-203ENST00000586055 FGD6Q6ZV73 1430 aa43.98■■■■■ 4.63
PALM-203ENST00000586055 CROCC2H7BZ55 1655 aa43.97■■■■■ 4.63
PALM-203ENST00000586055 CAMSAP1Q5T5Y3 1602 aa43.97■■■■■ 4.63
PALM-203ENST00000586055 WASHC2CQ9Y4E1 1318 aa43.96■■■■■ 4.63
PALM-203ENST00000586055 RNF17Q9BXT8 1623 aaKnown RBP43.95■■■■■ 4.63
PALM-203ENST00000586055 EIF2AK4Q9P2K8 1649 aaKnown RBP43.95■■■■■ 4.63
PALM-203ENST00000586055 CEP170BQ9Y4F5 1589 aaPredicted RBP43.95■■■■■ 4.63
PALM-203ENST00000586055 ABCC5O15440 1437 aa43.94■■■■■ 4.62
PALM-203ENST00000586055 PTPRTO14522 1441 aa43.93■■■■■ 4.62
PALM-203ENST00000586055 TCOF1Q13428 1488 aaKnown RBP43.93■■■■■ 4.62
PALM-203ENST00000586055 SHANK2Q9UPX8 1470 aa43.92■■■■■ 4.62
PALM-203ENST00000586055 PZPP20742 1482 aa43.91■■■■■ 4.62
PALM-203ENST00000586055 DUOX2Q9NRD8 1548 aa43.89■■■■■ 4.62
PALM-203ENST00000586055 DNMT1P26358 1616 aaKnown RBP43.89■■■■■ 4.62
PALM-203ENST00000586055 DAPK1P53355 1430 aa43.88■■■■■ 4.61
PALM-203ENST00000586055 CERKQ8TCT0 537 aa43.87■■■■■ 4.61
PALM-203ENST00000586055 FBXO31Q5XUX0 539 aaPredicted RBP43.86■■■■■ 4.61
PALM-203ENST00000586055 TNRQ92752 1358 aa43.82■■■■■ 4.61
PALM-203ENST00000586055 KIF15Q9NS87 1388 aa43.82■■■■■ 4.61
PALM-203ENST00000586055 ZC3H13Q5T200 1668 aaKnown RBP43.82■■■■■ 4.61
PALM-203ENST00000586055 MROH1Q8NDA8 1641 aa43.82■■■■■ 4.61
PALM-203ENST00000586055 A2ML1A8K2U0 1454 aa43.82■■■■■ 4.6
PALM-203ENST00000586055 ABCC3O15438 1527 aa43.81■■■■■ 4.6
PALM-203ENST00000586055 PLA2R1Q13018 1463 aa43.81■■■■■ 4.6
PALM-203ENST00000586055 NCKAP5LQ9HCH0 1330 aa43.76■■■■■ 4.6
PALM-203ENST00000586055 RRP7BPQ9NSQ0 103 aa43.76■■■■■ 4.6
PALM-203ENST00000586055 ERBINQ96RT1 1412 aa43.73■■■■■ 4.59
PALM-203ENST00000586055 CEP152O94986 1710 aa43.73■■■■■ 4.59
PALM-203ENST00000586055 PKD2Q13563 968 aa43.71■■■■■ 4.59
PALM-203ENST00000586055 CHIC2Q9UKJ5 165 aa43.68■■■■■ 4.58
PALM-203ENST00000586055 ANKRD30AQ9BXX3 1397 aa43.66■■■■■ 4.58
PALM-203ENST00000586055 PRDM15P57071 1507 aaPredicted RBP43.65■■■■■ 4.58
PALM-203ENST00000586055 NLRP1Q9C000 1473 aa43.64■■■■■ 4.58
PALM-203ENST00000586055 LTBP4Q8N2S1 1624 aa43.63■■■■■ 4.58
PALM-203ENST00000586055 SPATA31D1Q6ZQQ2 1576 aa43.63■■■■■ 4.57
PALM-203ENST00000586055 FAM50AQ14320 339 aaKnown RBP43.62■■■■■ 4.57
PALM-203ENST00000586055 DEPDC5O75140 1603 aa43.6■■■■■ 4.57
PALM-203ENST00000586055 ERVK-7P63135 1459 aa43.58■■■■■ 4.57
PALM-203ENST00000586055 CFAP65Q6ZU64 1925 aaKnown RBP43.56■■■■■ 4.56
PALM-203ENST00000586055 ADGRL2O95490 1459 aa43.56■■■■■ 4.56
PALM-203ENST00000586055 POLR1AO95602 1720 aaPredicted RBP43.56■■■■■ 4.56
PALM-203ENST00000586055 UGGT1Q9NYU2 1555 aa43.55■■■■■ 4.56
PALM-203ENST00000586055 GRWD1Q9BQ67 446 aaKnown RBP eCLIP43.52■■■■■ 4.56
PALM-203ENST00000586055 THEMISQ8N1K5 641 aaPredicted RBP43.5■■■■■ 4.55
PALM-203ENST00000586055 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP43.5■■■■■ 4.55
PALM-203ENST00000586055 NEURL4Q96JN8 1562 aa43.49■■■■■ 4.55
PALM-203ENST00000586055 ARHGAP31Q2M1Z3 1444 aa43.48■■■■■ 4.55
PALM-203ENST00000586055 ZNF335Q9H4Z2 1342 aaPredicted RBP43.48■■■■■ 4.55
PALM-203ENST00000586055 KANK1Q14678 1352 aa43.47■■■■■ 4.55
PALM-203ENST00000586055 VWDEQ8N2E2 1590 aa43.41■■■■■ 4.54
PALM-203ENST00000586055 ANKLE2Q86XL3 938 aa43.41■■■■■ 4.54
PALM-203ENST00000586055 IQSEC2Q5JU85 1478 aa43.4■■■■■ 4.54
PALM-203ENST00000586055 LMTK2Q8IWU2 1503 aa43.38■■■■■ 4.54
PALM-203ENST00000586055 PPARGC1BQ86YN6 1023 aaKnown RBP43.36■■■■■ 4.53
PALM-203ENST00000586055 UBR1Q8IWV7 1749 aa43.35■■■■■ 4.53
PALM-203ENST00000586055 ANKRD50Q9ULJ7 1429 aa43.35■■■■■ 4.53
PALM-203ENST00000586055 MED14O60244 1454 aa43.31■■■■■ 4.52
PALM-203ENST00000586055 NPHP4O75161 1426 aaPredicted RBP43.29■■■■■ 4.52
PALM-203ENST00000586055 EFCAB6Q5THR3 1501 aa43.26■■■■■ 4.52
PALM-203ENST00000586055 IQGAP1P46940 1657 aa43.24■■■■■ 4.51
PALM-203ENST00000586055 PIK3C2BO00750 1634 aa43.22■■■■■ 4.51
PALM-203ENST00000586055 ROCK1Q13464 1354 aa43.21■■■■■ 4.51
PALM-203ENST00000586055 SYNMO15061 1565 aa43.17■■■■■ 4.5
PALM-203ENST00000586055 ARHGAP23Q9P227 1491 aa43.16■■■■■ 4.5
PALM-203ENST00000586055 SLIT1O75093 1534 aa43.16■■■■■ 4.5
PALM-203ENST00000586055 UNC13BO14795 1591 aa43.15■■■■■ 4.5
PALM-203ENST00000586055 NOS1P29475 1434 aa43.14■■■■■ 4.5
PALM-203ENST00000586055 CPS1P31327 1500 aa43.14■■■■■ 4.5
PALM-203ENST00000586055 ITGAEP38570 1179 aa43.13■■■■■ 4.49
PALM-203ENST00000586055 SCAF11Q99590 1463 aaKnown RBP43.13■■■■■ 4.49
PALM-203ENST00000586055 TET3O43151 1660 aa43.11■■■■■ 4.49
PALM-203ENST00000586055 KDM5AP29375 1690 aaKnown RBP43.11■■■■■ 4.49
PALM-203ENST00000586055 IDI1Q13907 227 aa43.1■■■■■ 4.49
PALM-203ENST00000586055 RPRD2Q5VT52 1461 aaKnown RBP43.09■■■■■ 4.49
PALM-203ENST00000586055 LTKP29376 864 aa43.08■■■■■ 4.49
PALM-203ENST00000586055 STAG3Q9UJ98 1225 aa43.08■■■■■ 4.49
PALM-203ENST00000586055 GCC2Q8IWJ2 1684 aa43.06■■■■■ 4.48
PALM-203ENST00000586055 TXNDC2Q86VQ3 553 aa43.06■■■■■ 4.48
PALM-203ENST00000586055 UBAP1LF5GYI3 381 aa43.05■■■■■ 4.48
PALM-203ENST00000586055 TMEM2Q9UHN6 1383 aa43.03■■■■■ 4.48
PALM-203ENST00000586055 EID1Q9Y6B2 187 aa43.01■■■■■ 4.48
PALM-203ENST00000586055 STRCP1A6NGW2 1772 aa43■■■■■ 4.47
PALM-203ENST00000586055 ADGRB3O60242 1522 aa42.99■■■■■ 4.47
PALM-203ENST00000586055 SLC52A1Q9NWF4 448 aa42.99■■■■■ 4.47
PALM-203ENST00000586055 RRBP1Q9P2E9 1410 aaKnown RBP42.98■■■■■ 4.47
PALM-203ENST00000586055 IQGAP3Q86VI3 1631 aa42.98■■■■■ 4.47
PALM-203ENST00000586055 E9PCH4 1651 aa42.95■■■■■ 4.47
PALM-203ENST00000586055 NUP155O75694 1391 aa42.89■■■■■ 4.46
PALM-203ENST00000586055 MYO5BQ9ULV0 1848 aa42.85■■■■■ 4.45
PALM-203ENST00000586055 LRRC7Q96NW7 1537 aa42.85■■■■■ 4.45
PALM-203ENST00000586055 TOM1O60784 492 aa42.81■■■■■ 4.44
PALM-203ENST00000586055 TMEM131LA2VDJ0 1609 aa42.8■■■■■ 4.44
PALM-203ENST00000586055 SCAF1Q9H7N4 1312 aaKnown RBP42.73■■■■■ 4.43
PALM-203ENST00000586055 ZFYVE9O95405 1425 aa42.73■■■■■ 4.43
PALM-203ENST00000586055 ALKQ9UM73 1620 aa42.73■■■■■ 4.43
PALM-203ENST00000586055 PIP4K2BP78356 416 aa42.73■■■■■ 4.43
PALM-203ENST00000586055 NAIPQ13075 1403 aa42.71■■■■■ 4.43
PALM-203ENST00000586055 RIMS2Q9UQ26 1411 aa42.7■■■■■ 4.43
PALM-203ENST00000586055 SLC26A8Q96RN1 970 aa42.69■■■■■ 4.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms