RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 MYOM3Q5VTT5 1437 aa26.83■■□□□ 1.89
MBD3-204ENST00000585967 PTPRKQ15262 1439 aa26.82■■□□□ 1.88
MBD3-204ENST00000585967 EIF2AK4Q9P2K8 1649 aaKnown RBP26.82■■□□□ 1.88
MBD3-204ENST00000585967 ZC3H13Q5T200 1668 aaKnown RBP26.82■■□□□ 1.88
MBD3-204ENST00000585967 KIF3BO15066 747 aa26.79■■□□□ 1.88
MBD3-204ENST00000585967 PLA2R1Q13018 1463 aa26.79■■□□□ 1.88
MBD3-204ENST00000585967 RNF17Q9BXT8 1623 aaKnown RBP26.78■■□□□ 1.88
MBD3-204ENST00000585967 CROCC2H7BZ55 1655 aa26.77■■□□□ 1.88
MBD3-204ENST00000585967 POLR1AO95602 1720 aaPredicted RBP26.75■■□□□ 1.87
MBD3-204ENST00000585967 PZPP20742 1482 aa26.74■■□□□ 1.87
MBD3-204ENST00000585967 A2ML1A8K2U0 1454 aa26.73■■□□□ 1.87
MBD3-204ENST00000585967 WASHC2CQ9Y4E1 1318 aa26.72■■□□□ 1.87
MBD3-204ENST00000585967 PTPN23Q9H3S7 1636 aa26.72■■□□□ 1.87
MBD3-204ENST00000585967 KANK4Q5T7N3 995 aaPredicted RBP26.71■■□□□ 1.87
MBD3-204ENST00000585967 DNMT1P26358 1616 aaKnown RBP26.71■■□□□ 1.87
MBD3-204ENST00000585967 IQSEC2Q5JU85 1478 aa26.69■■□□□ 1.86
MBD3-204ENST00000585967 PKD2Q13563 968 aa26.69■■□□□ 1.86
MBD3-204ENST00000585967 DUOX2Q9NRD8 1548 aa26.69■■□□□ 1.86
MBD3-204ENST00000585967 SHANK2Q9UPX8 1470 aa26.68■■□□□ 1.86
MBD3-204ENST00000585967 TNRQ92752 1358 aa26.68■■□□□ 1.86
MBD3-204ENST00000585967 TCOF1Q13428 1488 aaKnown RBP26.67■■□□□ 1.86
MBD3-204ENST00000585967 CEP152O94986 1710 aa26.65■■□□□ 1.86
MBD3-204ENST00000585967 LTBP4Q8N2S1 1624 aa26.65■■□□□ 1.86
MBD3-204ENST00000585967 NLRP1Q9C000 1473 aa26.64■■□□□ 1.86
MBD3-204ENST00000585967 ABCC3O15438 1527 aa26.62■■□□□ 1.85
MBD3-204ENST00000585967 NCKAP5LQ9HCH0 1330 aa26.59■■□□□ 1.85
MBD3-204ENST00000585967 CFAP65Q6ZU64 1925 aaKnown RBP26.59■■□□□ 1.85
MBD3-204ENST00000585967 FGD6Q6ZV73 1430 aa26.58■■□□□ 1.85
MBD3-204ENST00000585967 ERBINQ96RT1 1412 aa26.58■■□□□ 1.85
MBD3-204ENST00000585967 UGGT1Q9NYU2 1555 aa26.58■■□□□ 1.85
MBD3-204ENST00000585967 MROH1Q8NDA8 1641 aa26.57■■□□□ 1.84
MBD3-204ENST00000585967 PRDM15P57071 1507 aaPredicted RBP26.56■■□□□ 1.84
MBD3-204ENST00000585967 SPATA31D1Q6ZQQ2 1576 aa26.56■■□□□ 1.84
MBD3-204ENST00000585967 KIF15Q9NS87 1388 aa26.56■■□□□ 1.84
MBD3-204ENST00000585967 DAPK1P53355 1430 aa26.55■■□□□ 1.84
MBD3-204ENST00000585967 FBXO31Q5XUX0 539 aaPredicted RBP26.54■■□□□ 1.84
MBD3-204ENST00000585967 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
MBD3-204ENST00000585967 ABCC5O15440 1437 aa26.52■■□□□ 1.84
MBD3-204ENST00000585967 THEMISQ8N1K5 641 aaPredicted RBP26.52■■□□□ 1.84
MBD3-204ENST00000585967 NEURL4Q96JN8 1562 aa26.5■■□□□ 1.83
MBD3-204ENST00000585967 ERVK-7P63135 1459 aa26.49■■□□□ 1.83
MBD3-204ENST00000585967 KANK1Q14678 1352 aa26.48■■□□□ 1.83
MBD3-204ENST00000585967 ANKRD30AQ9BXX3 1397 aa26.48■■□□□ 1.83
MBD3-204ENST00000585967 IQGAP1P46940 1657 aa26.47■■□□□ 1.83
MBD3-204ENST00000585967 ZNF335Q9H4Z2 1342 aaPredicted RBP26.47■■□□□ 1.83
MBD3-204ENST00000585967 ANKLE2Q86XL3 938 aa26.47■■□□□ 1.83
MBD3-204ENST00000585967 UBR1Q8IWV7 1749 aa26.45■■□□□ 1.83
MBD3-204ENST00000585967 CPS1P31327 1500 aa26.45■■□□□ 1.83
MBD3-204ENST00000585967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.44■■□□□ 1.823e-7■□□□□ 9.3
MBD3-204ENST00000585967 ARHGAP31Q2M1Z3 1444 aa26.43■■□□□ 1.82
MBD3-204ENST00000585967 RRP7BPQ9NSQ0 103 aa26.43■■□□□ 1.82
MBD3-204ENST00000585967 MED14O60244 1454 aa26.42■■□□□ 1.82
MBD3-204ENST00000585967 NPHP4O75161 1426 aaPredicted RBP26.39■■□□□ 1.81
MBD3-204ENST00000585967 KDM5AP29375 1690 aaKnown RBP26.38■■□□□ 1.81
MBD3-204ENST00000585967 ADGRL2O95490 1459 aa26.38■■□□□ 1.81
MBD3-204ENST00000585967 LMTK2Q8IWU2 1503 aa26.35■■□□□ 1.81
MBD3-204ENST00000585967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.34■■□□□ 1.81
MBD3-204ENST00000585967 UBAP1LF5GYI3 381 aa26.33■■□□□ 1.81
MBD3-204ENST00000585967 FAM50AQ14320 339 aaKnown RBP26.33■■□□□ 1.81
MBD3-204ENST00000585967 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.81
MBD3-204ENST00000585967 SYNMO15061 1565 aa26.33■■□□□ 1.8
MBD3-204ENST00000585967 VWDEQ8N2E2 1590 aa26.33■■□□□ 1.8
MBD3-204ENST00000585967 PIK3C2BO00750 1634 aa26.32■■□□□ 1.8
MBD3-204ENST00000585967 EFCAB6Q5THR3 1501 aa26.31■■□□□ 1.8
MBD3-204ENST00000585967 SCAF11Q99590 1463 aaKnown RBP26.3■■□□□ 1.8
MBD3-204ENST00000585967 SLIT1O75093 1534 aa26.29■■□□□ 1.8
MBD3-204ENST00000585967 GCC2Q8IWJ2 1684 aa26.26■■□□□ 1.79
MBD3-204ENST00000585967 TET3O43151 1660 aa26.25■■□□□ 1.79
MBD3-204ENST00000585967 ANKRD50Q9ULJ7 1429 aa26.25■■□□□ 1.79
MBD3-204ENST00000585967 STAG3Q9UJ98 1225 aa26.25■■□□□ 1.79
MBD3-204ENST00000585967 ARHGAP23Q9P227 1491 aa26.24■■□□□ 1.79
MBD3-204ENST00000585967 EID1Q9Y6B2 187 aa26.24■■□□□ 1.79
MBD3-204ENST00000585967 RPRD2Q5VT52 1461 aaKnown RBP26.23■■□□□ 1.79
MBD3-204ENST00000585967 DISP3Q9P2K9 1392 aa26.23■■□□□ 1.79
MBD3-204ENST00000585967 TOM1O60784 492 aa26.23■■□□□ 1.79
MBD3-204ENST00000585967 UNC13BO14795 1591 aa26.21■■□□□ 1.79
MBD3-204ENST00000585967 STRCP1A6NGW2 1772 aa26.21■■□□□ 1.79
MBD3-204ENST00000585967 ADGRB3O60242 1522 aa26.19■■□□□ 1.78
MBD3-204ENST00000585967 SCAF1Q9H7N4 1312 aaKnown RBP26.17■■□□□ 1.78
MBD3-204ENST00000585967 TXNDC2Q86VQ3 553 aa26.17■■□□□ 1.78
MBD3-204ENST00000585967 TMEM2Q9UHN6 1383 aa26.16■■□□□ 1.78
MBD3-204ENST00000585967 NOS1P29475 1434 aa26.15■■□□□ 1.78
MBD3-204ENST00000585967 ROCK1Q13464 1354 aa26.15■■□□□ 1.78
MBD3-204ENST00000585967 SLC52A1Q9NWF4 448 aa26.13■■□□□ 1.77
MBD3-204ENST00000585967 MYO5BQ9ULV0 1848 aa26.13■■□□□ 1.77
MBD3-204ENST00000585967 IQGAP3Q86VI3 1631 aa26.12■■□□□ 1.77
MBD3-204ENST00000585967 LRRC7Q96NW7 1537 aa26.11■■□□□ 1.77
MBD3-204ENST00000585967 PIP4K2BP78356 416 aa26.09■■□□□ 1.77
MBD3-204ENST00000585967 LTKP29376 864 aa26.08■■□□□ 1.77
MBD3-204ENST00000585967 IDI1Q13907 227 aa26.08■■□□□ 1.77
MBD3-204ENST00000585967 E9PCH4 1651 aa26.08■■□□□ 1.77
MBD3-204ENST00000585967 XIRP1Q702N8 1843 aaKnown RBP26.07■■□□□ 1.76
MBD3-204ENST00000585967 HDGFP51858 240 aaKnown RBP26.02■■□□□ 1.76
MBD3-204ENST00000585967 TMEM131LA2VDJ0 1609 aa26.02■■□□□ 1.76
MBD3-204ENST00000585967 ALKQ9UM73 1620 aa25.99■■□□□ 1.75
MBD3-204ENST00000585967 HSPA1LP34931 641 aa25.98■■□□□ 1.75
MBD3-204ENST00000585967 NWD1Q149M9 1564 aa25.98■■□□□ 1.75
MBD3-204ENST00000585967 NKTRP30414 1462 aaKnown RBP25.98■■□□□ 1.75
MBD3-204ENST00000585967 ITGAEP38570 1179 aa25.97■■□□□ 1.75
MBD3-204ENST00000585967 BCANQ96GW7 911 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms