RNA–Protein interactions for RNA: ENST00000585856.2

PTBP1-206, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 1,217 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-206ENST00000585856 NCKAP5LQ9HCH0 1330 aa42.22■■■■■ 4.35
PTBP1-206ENST00000585856 A2ML1A8K2U0 1454 aa42.22■■■■■ 4.35
PTBP1-206ENST00000585856 DNMT1P26358 1616 aaKnown RBP42.18■■■■■ 4.34
PTBP1-206ENST00000585856 TSPY4P0CV99 314 aa42.18■■■■■ 4.34
PTBP1-206ENST00000585856 TSPY10P0CW01 314 aa42.18■■■■■ 4.34
PTBP1-206ENST00000585856 MAP3K1Q13233 1512 aa42.18■■■■■ 4.34
PTBP1-206ENST00000585856 PZPP20742 1482 aa42.17■■■■■ 4.34
PTBP1-206ENST00000585856 MAST1Q9Y2H9 1570 aa42.12■■■■■ 4.33
PTBP1-206ENST00000585856 LOC105371045A0A1W2PR82 267 aa42.11■■■■■ 4.33
PTBP1-206ENST00000585856 WASHC2CQ9Y4E1 1318 aa42.11■■■■■ 4.33
PTBP1-206ENST00000585856 TNRQ92752 1358 aa42.1■■■■■ 4.33
PTBP1-206ENST00000585856 POLR1AO95602 1720 aaPredicted RBP42.09■■■■■ 4.33
PTBP1-206ENST00000585856 ZNF335Q9H4Z2 1342 aaPredicted RBP42.07■■■■■ 4.33
PTBP1-206ENST00000585856 RNF17Q9BXT8 1623 aaKnown RBP42.06■■■■■ 4.32
PTBP1-206ENST00000585856 MIA2Q96PC5 1412 aa42.04■■■■■ 4.32
PTBP1-206ENST00000585856 FBXO31Q5XUX0 539 aaPredicted RBP42.03■■■■■ 4.32
PTBP1-206ENST00000585856 ZC3H13Q5T200 1668 aaKnown RBP42.03■■■■■ 4.32
PTBP1-206ENST00000585856 EIF2AK4Q9P2K8 1649 aaKnown RBP42.02■■■■■ 4.32
PTBP1-206ENST00000585856 MYOM3Q5VTT5 1437 aa42.02■■■■■ 4.32
PTBP1-206ENST00000585856 KANK4Q5T7N3 995 aaPredicted RBP41.99■■■■■ 4.31
PTBP1-206ENST00000585856 NLRP1Q9C000 1473 aa41.98■■■■■ 4.31
PTBP1-206ENST00000585856 NEURL4Q96JN8 1562 aa41.93■■■■■ 4.3
PTBP1-206ENST00000585856 ABCC3O15438 1527 aa41.9■■■■■ 4.3
PTBP1-206ENST00000585856 DISP3Q9P2K9 1392 aa41.9■■■■■ 4.3
PTBP1-206ENST00000585856 UGGT1Q9NYU2 1555 aa41.89■■■■■ 4.3
PTBP1-206ENST00000585856 THEMISQ8N1K5 641 aaPredicted RBP41.88■■■■■ 4.29
PTBP1-206ENST00000585856 DUOX2Q9NRD8 1548 aa41.85■■■■■ 4.29
PTBP1-206ENST00000585856 SPATA31D1Q6ZQQ2 1576 aa41.84■■■■■ 4.29
PTBP1-206ENST00000585856 ANKLE2Q86XL3 938 aa41.84■■■■■ 4.29
PTBP1-206ENST00000585856 DEPDC5O75140 1603 aa41.84■■■■■ 4.29
PTBP1-206ENST00000585856 MROH1Q8NDA8 1641 aa41.84■■■■■ 4.29
PTBP1-206ENST00000585856 UBAP1LF5GYI3 381 aa41.83■■■■■ 4.29
PTBP1-206ENST00000585856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.83■■■■■ 4.29
PTBP1-206ENST00000585856 CROCC2H7BZ55 1655 aa41.83■■■■■ 4.29
PTBP1-206ENST00000585856 CPS1P31327 1500 aa41.82■■■■■ 4.29
PTBP1-206ENST00000585856 CEP152O94986 1710 aa41.81■■■■■ 4.28
PTBP1-206ENST00000585856 SHANK2Q9UPX8 1470 aa41.79■■■■■ 4.28
PTBP1-206ENST00000585856 MED14O60244 1454 aa41.78■■■■■ 4.28
PTBP1-206ENST00000585856 APLP2Q06481 763 aa41.77■■■■■ 4.28
PTBP1-206ENST00000585856 PTPN23Q9H3S7 1636 aa41.77■■■■■ 4.28
PTBP1-206ENST00000585856 ERVK-7P63135 1459 aa41.76■■■■■ 4.28
PTBP1-206ENST00000585856 CFAP65Q6ZU64 1925 aaKnown RBP41.72■■■■■ 4.27
PTBP1-206ENST00000585856 IQGAP1P46940 1657 aa41.71■■■■■ 4.27
PTBP1-206ENST00000585856 NPHP4O75161 1426 aaPredicted RBP41.7■■■■■ 4.27
PTBP1-206ENST00000585856 PRDM15P57071 1507 aaPredicted RBP41.7■■■■■ 4.27
PTBP1-206ENST00000585856 ERBINQ96RT1 1412 aa41.69■■■■■ 4.27
PTBP1-206ENST00000585856 VWDEQ8N2E2 1590 aa41.69■■■■■ 4.26
PTBP1-206ENST00000585856 KIF15Q9NS87 1388 aa41.69■■■■■ 4.26
PTBP1-206ENST00000585856 ABCC5O15440 1437 aa41.68■■■■■ 4.26
PTBP1-206ENST00000585856 UBR1Q8IWV7 1749 aa41.64■■■■■ 4.26
PTBP1-206ENST00000585856 DAPK1P53355 1430 aa41.62■■■■■ 4.25
PTBP1-206ENST00000585856 ILDR2Q71H61 639 aa41.62■■■■■ 4.25
PTBP1-206ENST00000585856 ARHGAP31Q2M1Z3 1444 aa41.61■■■■■ 4.25
PTBP1-206ENST00000585856 FGD6Q6ZV73 1430 aa41.61■■■■■ 4.25
PTBP1-206ENST00000585856 TOM1O60784 492 aa41.58■■■■■ 4.25
PTBP1-206ENST00000585856 RRP7BPQ9NSQ0 103 aa41.57■■■■■ 4.25
PTBP1-206ENST00000585856 KANK1Q14678 1352 aa41.5■■■■■ 4.23
PTBP1-206ENST00000585856 ANKRD30AQ9BXX3 1397 aa41.49■■■■■ 4.23
PTBP1-206ENST00000585856 STRCP1A6NGW2 1772 aa41.48■■■■■ 4.23
PTBP1-206ENST00000585856 SOCS7O14512 581 aa41.48■■■■■ 4.23
PTBP1-206ENST00000585856 SYNMO15061 1565 aa41.48■■■■■ 4.23
PTBP1-206ENST00000585856 SCAF11Q99590 1463 aaKnown RBP41.47■■■■■ 4.23
PTBP1-206ENST00000585856 SCAF1Q9H7N4 1312 aaKnown RBP41.47■■■■■ 4.23
PTBP1-206ENST00000585856 SLIT1O75093 1534 aa41.47■■■■■ 4.23
PTBP1-206ENST00000585856 ARHGAP23Q9P227 1491 aa41.46■■■■■ 4.23
PTBP1-206ENST00000585856 PIP4K2BP78356 416 aa41.45■■■■■ 4.23
PTBP1-206ENST00000585856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP41.44■■■■■ 4.227e-8■□□□□ 8.4
PTBP1-206ENST00000585856 LMTK2Q8IWU2 1503 aa41.42■■■■■ 4.22
PTBP1-206ENST00000585856 KDM5AP29375 1690 aaKnown RBP41.42■■■■■ 4.22
PTBP1-206ENST00000585856 PIK3C2BO00750 1634 aa41.41■■■■■ 4.22
PTBP1-206ENST00000585856 LRRC7Q96NW7 1537 aa41.39■■■■■ 4.22
PTBP1-206ENST00000585856 HSPA1LP34931 641 aa41.37■■■■■ 4.21
PTBP1-206ENST00000585856 CHIC2Q9UKJ5 165 aa41.36■■■■■ 4.21
PTBP1-206ENST00000585856 ALKQ9UM73 1620 aa41.36■■■■■ 4.21
PTBP1-206ENST00000585856 ADGRL2O95490 1459 aa41.34■■■■■ 4.21
PTBP1-206ENST00000585856 TXNDC2Q86VQ3 553 aa41.34■■■■■ 4.21
PTBP1-206ENST00000585856 EID1Q9Y6B2 187 aa41.34■■■■■ 4.21
PTBP1-206ENST00000585856 LTKP29376 864 aa41.33■■■■■ 4.21
PTBP1-206ENST00000585856 EFCAB6Q5THR3 1501 aa41.29■■■■■ 4.2
PTBP1-206ENST00000585856 TMEM2Q9UHN6 1383 aa41.28■■■■■ 4.2
PTBP1-206ENST00000585856 STAG3Q9UJ98 1225 aa41.27■■■■■ 4.2
PTBP1-206ENST00000585856 MED1Q15648 1581 aaPredicted RBP41.25■■■■■ 4.19
PTBP1-206ENST00000585856 NOS1P29475 1434 aa41.21■■■■■ 4.19
PTBP1-206ENST00000585856 IDI1Q13907 227 aa41.2■■■■■ 4.19
PTBP1-206ENST00000585856 XIRP1Q702N8 1843 aaKnown RBP41.19■■■■■ 4.18
PTBP1-206ENST00000585856 FAM50AQ14320 339 aaKnown RBP41.19■■■■■ 4.18
PTBP1-206ENST00000585856 ANKRD50Q9ULJ7 1429 aa41.17■■■■■ 4.18
PTBP1-206ENST00000585856 RPRD2Q5VT52 1461 aaKnown RBP41.16■■■■■ 4.18
PTBP1-206ENST00000585856 ADGRB3O60242 1522 aa41.16■■■■■ 4.18
PTBP1-206ENST00000585856 SLC52A1Q9NWF4 448 aa41.13■■■■■ 4.17
PTBP1-206ENST00000585856 TET3O43151 1660 aa41.11■■■■■ 4.17
PTBP1-206ENST00000585856 GCC2Q8IWJ2 1684 aa41.07■■■■■ 4.16
PTBP1-206ENST00000585856 UNC13BO14795 1591 aa41.03■■■■■ 4.16
PTBP1-206ENST00000585856 MYO5BQ9ULV0 1848 aa41■■■■■ 4.15
PTBP1-206ENST00000585856 KCNA6P17658 529 aa40.99■■■■■ 4.15
PTBP1-206ENST00000585856 NWD1Q149M9 1564 aa40.95■■■■■ 4.15
PTBP1-206ENST00000585856 SLC26A8Q96RN1 970 aa40.95■■■■■ 4.15
PTBP1-206ENST00000585856 NKTRP30414 1462 aaKnown RBP40.94■■■■■ 4.14
PTBP1-206ENST00000585856 TMEM94Q12767 1356 aa40.93■■■■■ 4.14
PTBP1-206ENST00000585856 ROCK1Q13464 1354 aa40.93■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms