RNA–Protein interactions for RNA: ENST00000584939.1

ITGB4-213, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-213ENST00000584939 NCOA1Q15788 1441 aa26.68■■□□□ 1.86
ITGB4-213ENST00000584939 FBXO31Q5XUX0 539 aaPredicted RBP26.68■■□□□ 1.86
ITGB4-213ENST00000584939 FAM135AQ9P2D6 1515 aa26.67■■□□□ 1.86
ITGB4-213ENST00000584939 CERKQ8TCT0 537 aa26.67■■□□□ 1.86
ITGB4-213ENST00000584939 PTPRTO14522 1441 aa26.66■■□□□ 1.86
ITGB4-213ENST00000584939 CAMSAP1Q5T5Y3 1602 aa26.65■■□□□ 1.86
ITGB4-213ENST00000584939 TCOF1Q13428 1488 aaKnown RBP26.64■■□□□ 1.86
ITGB4-213ENST00000584939 RRP7BPQ9NSQ0 103 aa26.64■■□□□ 1.86
ITGB4-213ENST00000584939 MYO3AQ8NEV4 1616 aa26.64■■□□□ 1.85
ITGB4-213ENST00000584939 PZPP20742 1482 aa26.63■■□□□ 1.85
ITGB4-213ENST00000584939 DAPK1P53355 1430 aa26.63■■□□□ 1.85
ITGB4-213ENST00000584939 SHANK2Q9UPX8 1470 aa26.62■■□□□ 1.85
ITGB4-213ENST00000584939 TNRQ92752 1358 aa26.62■■□□□ 1.85
ITGB4-213ENST00000584939 CEP170BQ9Y4F5 1589 aaPredicted RBP26.62■■□□□ 1.85
ITGB4-213ENST00000584939 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
ITGB4-213ENST00000584939 KIF15Q9NS87 1388 aa26.61■■□□□ 1.85
ITGB4-213ENST00000584939 DUOX2Q9NRD8 1548 aa26.61■■□□□ 1.85
ITGB4-213ENST00000584939 RNF17Q9BXT8 1623 aaKnown RBP26.6■■□□□ 1.85
ITGB4-213ENST00000584939 EIF2AK4Q9P2K8 1649 aaKnown RBP26.59■■□□□ 1.85
ITGB4-213ENST00000584939 ZNF142P52746 1687 aaPredicted RBP26.59■■□□□ 1.85
ITGB4-213ENST00000584939 A2ML1A8K2U0 1454 aa26.58■■□□□ 1.85
ITGB4-213ENST00000584939 CHIC2Q9UKJ5 165 aa26.58■■□□□ 1.85
ITGB4-213ENST00000584939 PKD2Q13563 968 aa26.57■■□□□ 1.84
ITGB4-213ENST00000584939 DNMT1P26358 1616 aaKnown RBP26.57■■□□□ 1.84
ITGB4-213ENST00000584939 FAM50AQ14320 339 aaKnown RBP26.56■■□□□ 1.84
ITGB4-213ENST00000584939 CROCC2H7BZ55 1655 aa26.56■■□□□ 1.84
ITGB4-213ENST00000584939 PLA2R1Q13018 1463 aa26.55■■□□□ 1.84
ITGB4-213ENST00000584939 ABCC3O15438 1527 aa26.55■■□□□ 1.84
ITGB4-213ENST00000584939 ANKRD30AQ9BXX3 1397 aa26.53■■□□□ 1.84
ITGB4-213ENST00000584939 ERBINQ96RT1 1412 aa26.53■■□□□ 1.84
ITGB4-213ENST00000584939 MROH1Q8NDA8 1641 aa26.52■■□□□ 1.84
ITGB4-213ENST00000584939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.49■■□□□ 1.83
ITGB4-213ENST00000584939 ZC3H13Q5T200 1668 aaKnown RBP26.49■■□□□ 1.83
ITGB4-213ENST00000584939 NLRP1Q9C000 1473 aa26.47■■□□□ 1.83
ITGB4-213ENST00000584939 THEMISQ8N1K5 641 aaPredicted RBP26.46■■□□□ 1.83
ITGB4-213ENST00000584939 LTBP4Q8N2S1 1624 aa26.43■■□□□ 1.82
ITGB4-213ENST00000584939 ERVK-7P63135 1459 aa26.43■■□□□ 1.82
ITGB4-213ENST00000584939 SPATA31D1Q6ZQQ2 1576 aa26.43■■□□□ 1.82
ITGB4-213ENST00000584939 PRDM15P57071 1507 aaPredicted RBP26.43■■□□□ 1.82
ITGB4-213ENST00000584939 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.43■■□□□ 1.82
ITGB4-213ENST00000584939 CEP152O94986 1710 aa26.42■■□□□ 1.82
ITGB4-213ENST00000584939 KANK1Q14678 1352 aa26.42■■□□□ 1.82
ITGB4-213ENST00000584939 ZNF335Q9H4Z2 1342 aaPredicted RBP26.41■■□□□ 1.82
ITGB4-213ENST00000584939 ANKLE2Q86XL3 938 aa26.41■■□□□ 1.82
ITGB4-213ENST00000584939 PPARGC1BQ86YN6 1023 aaKnown RBP26.41■■□□□ 1.82
ITGB4-213ENST00000584939 ADGRL2O95490 1459 aa26.41■■□□□ 1.82
ITGB4-213ENST00000584939 UGGT1Q9NYU2 1555 aa26.41■■□□□ 1.82
ITGB4-213ENST00000584939 ARHGAP31Q2M1Z3 1444 aa26.39■■□□□ 1.81
ITGB4-213ENST00000584939 DEPDC5O75140 1603 aa26.37■■□□□ 1.81
ITGB4-213ENST00000584939 ANKRD50Q9ULJ7 1429 aa26.32■■□□□ 1.8
ITGB4-213ENST00000584939 NEURL4Q96JN8 1562 aa26.32■■□□□ 1.8
ITGB4-213ENST00000584939 IQSEC2Q5JU85 1478 aa26.3■■□□□ 1.8
ITGB4-213ENST00000584939 LMTK2Q8IWU2 1503 aa26.3■■□□□ 1.8
ITGB4-213ENST00000584939 VWDEQ8N2E2 1590 aa26.3■■□□□ 1.8
ITGB4-213ENST00000584939 CFAP65Q6ZU64 1925 aaKnown RBP26.29■■□□□ 1.8
ITGB4-213ENST00000584939 POLR1AO95602 1720 aaPredicted RBP26.29■■□□□ 1.8
ITGB4-213ENST00000584939 NPHP4O75161 1426 aaPredicted RBP26.28■■□□□ 1.8
ITGB4-213ENST00000584939 ITGAEP38570 1179 aa26.27■■□□□ 1.8
ITGB4-213ENST00000584939 MED14O60244 1454 aa26.26■■□□□ 1.79
ITGB4-213ENST00000584939 ROCK1Q13464 1354 aa26.25■■□□□ 1.79
ITGB4-213ENST00000584939 IDI1Q13907 227 aa26.22■■□□□ 1.79
ITGB4-213ENST00000584939 STAG3Q9UJ98 1225 aa26.22■■□□□ 1.79
ITGB4-213ENST00000584939 UBR1Q8IWV7 1749 aa26.22■■□□□ 1.79
ITGB4-213ENST00000584939 EFCAB6Q5THR3 1501 aa26.2■■□□□ 1.79
ITGB4-213ENST00000584939 TXNDC2Q86VQ3 553 aa26.2■■□□□ 1.78
ITGB4-213ENST00000584939 LTKP29376 864 aa26.19■■□□□ 1.78
ITGB4-213ENST00000584939 UBAP1LF5GYI3 381 aa26.18■■□□□ 1.78
ITGB4-213ENST00000584939 NOS1P29475 1434 aa26.18■■□□□ 1.78
ITGB4-213ENST00000584939 SCAF11Q99590 1463 aaKnown RBP26.17■■□□□ 1.78
ITGB4-213ENST00000584939 ARHGAP23Q9P227 1491 aa26.17■■□□□ 1.78
ITGB4-213ENST00000584939 EID1Q9Y6B2 187 aa26.17■■□□□ 1.78
ITGB4-213ENST00000584939 SLIT1O75093 1534 aa26.16■■□□□ 1.78
ITGB4-213ENST00000584939 PIK3C2BO00750 1634 aa26.16■■□□□ 1.78
ITGB4-213ENST00000584939 IQGAP1P46940 1657 aa26.15■■□□□ 1.78
ITGB4-213ENST00000584939 CPS1P31327 1500 aa26.15■■□□□ 1.78
ITGB4-213ENST00000584939 SLC52A1Q9NWF4 448 aa26.14■■□□□ 1.78
ITGB4-213ENST00000584939 TMEM2Q9UHN6 1383 aa26.14■■□□□ 1.78
ITGB4-213ENST00000584939 SYNMO15061 1565 aa26.14■■□□□ 1.78
ITGB4-213ENST00000584939 RPRD2Q5VT52 1461 aaKnown RBP26.13■■□□□ 1.77
ITGB4-213ENST00000584939 UNC13BO14795 1591 aa26.12■■□□□ 1.77
ITGB4-213ENST00000584939 TET3O43151 1660 aa26.09■■□□□ 1.77
ITGB4-213ENST00000584939 RRBP1Q9P2E9 1410 aaKnown RBP26.09■■□□□ 1.77
ITGB4-213ENST00000584939 NUP155O75694 1391 aa26.08■■□□□ 1.77
ITGB4-213ENST00000584939 KDM5AP29375 1690 aaKnown RBP26.06■■□□□ 1.76
ITGB4-213ENST00000584939 ADGRB3O60242 1522 aa26.04■■□□□ 1.76
ITGB4-213ENST00000584939 TOM1O60784 492 aa26.04■■□□□ 1.76
ITGB4-213ENST00000584939 GCC2Q8IWJ2 1684 aa26.03■■□□□ 1.76
ITGB4-213ENST00000584939 IQGAP3Q86VI3 1631 aa26.01■■□□□ 1.75
ITGB4-213ENST00000584939 SCAF1Q9H7N4 1312 aaKnown RBP26■■□□□ 1.75
ITGB4-213ENST00000584939 PIP4K2BP78356 416 aa26■■□□□ 1.75
ITGB4-213ENST00000584939 LRRC7Q96NW7 1537 aa25.99■■□□□ 1.75
ITGB4-213ENST00000584939 STRCP1A6NGW2 1772 aa25.98■■□□□ 1.75
ITGB4-213ENST00000584939 E9PCH4 1651 aa25.97■■□□□ 1.75
ITGB4-213ENST00000584939 CHGAP10645 457 aaKnown RBP25.97■■□□□ 1.75
ITGB4-213ENST00000584939 SLC26A8Q96RN1 970 aa25.97■■□□□ 1.75
ITGB4-213ENST00000584939 BCANQ96GW7 911 aa25.96■■□□□ 1.75
ITGB4-213ENST00000584939 HDGFP51858 240 aaKnown RBP25.95■■□□□ 1.74
ITGB4-213ENST00000584939 SENP3Q9H4L4 574 aaPredicted RBP25.93■■□□□ 1.74
ITGB4-213ENST00000584939 NAIPQ13075 1403 aa25.93■■□□□ 1.74
ITGB4-213ENST00000584939 RIMS2Q9UQ26 1411 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms