RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 KDM5DQ9BY66 1539 aa32.11■■■□□ 2.73
TOP3A-219ENST00000584887 NCKAP5LQ9HCH0 1330 aa32.11■■■□□ 2.73
TOP3A-219ENST00000584887 MIA2Q96PC5 1412 aa32.1■■■□□ 2.73
TOP3A-219ENST00000584887 WASHC2CQ9Y4E1 1318 aa32.1■■■□□ 2.73
TOP3A-219ENST00000584887 FBXO31Q5XUX0 539 aaPredicted RBP32.07■■■□□ 2.72
TOP3A-219ENST00000584887 MAST1Q9Y2H9 1570 aa32.07■■■□□ 2.72
TOP3A-219ENST00000584887 TNRQ92752 1358 aa32.06■■■□□ 2.72
TOP3A-219ENST00000584887 FAM135AQ9P2D6 1515 aa32.05■■■□□ 2.72
TOP3A-219ENST00000584887 A2ML1A8K2U0 1454 aa32.03■■■□□ 2.72
TOP3A-219ENST00000584887 PZPP20742 1482 aa32.03■■■□□ 2.72
TOP3A-219ENST00000584887 PLA2R1Q13018 1463 aa32.03■■■□□ 2.72
TOP3A-219ENST00000584887 PKD2Q13563 968 aa32.01■■■□□ 2.71
TOP3A-219ENST00000584887 LTBP4Q8N2S1 1624 aa31.98■■■□□ 2.71
TOP3A-219ENST00000584887 TCOF1Q13428 1488 aaKnown RBP31.97■■■□□ 2.71
TOP3A-219ENST00000584887 DNMT1P26358 1616 aaKnown RBP31.97■■■□□ 2.71
TOP3A-219ENST00000584887 RNF17Q9BXT8 1623 aaKnown RBP31.97■■■□□ 2.71
TOP3A-219ENST00000584887 PTPN23Q9H3S7 1636 aa31.95■■■□□ 2.71
TOP3A-219ENST00000584887 ZNF335Q9H4Z2 1342 aaPredicted RBP31.94■■■□□ 2.7
TOP3A-219ENST00000584887 EIF2AK4Q9P2K8 1649 aaKnown RBP31.93■■■□□ 2.7
TOP3A-219ENST00000584887 ABCC3O15438 1527 aa31.92■■■□□ 2.7
TOP3A-219ENST00000584887 ABCC5O15440 1437 aa31.91■■■□□ 2.7
TOP3A-219ENST00000584887 DUOX2Q9NRD8 1548 aa31.9■■■□□ 2.7
TOP3A-219ENST00000584887 KIF15Q9NS87 1388 aa31.9■■■□□ 2.7
TOP3A-219ENST00000584887 FGD6Q6ZV73 1430 aa31.89■■■□□ 2.7
TOP3A-219ENST00000584887 RRP7BPQ9NSQ0 103 aa31.88■■■□□ 2.69
TOP3A-219ENST00000584887 SHANK2Q9UPX8 1470 aa31.88■■■□□ 2.69
TOP3A-219ENST00000584887 CROCC2H7BZ55 1655 aa31.88■■■□□ 2.69
TOP3A-219ENST00000584887 ZC3H13Q5T200 1668 aaKnown RBP31.87■■■□□ 2.69
TOP3A-219ENST00000584887 MROH1Q8NDA8 1641 aa31.86■■■□□ 2.69
TOP3A-219ENST00000584887 NLRP1Q9C000 1473 aa31.85■■■□□ 2.69
TOP3A-219ENST00000584887 DAPK1P53355 1430 aa31.85■■■□□ 2.69
TOP3A-219ENST00000584887 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.83■■■□□ 2.69
TOP3A-219ENST00000584887 IQSEC2Q5JU85 1478 aa31.83■■■□□ 2.69
TOP3A-219ENST00000584887 CEP152O94986 1710 aa31.83■■■□□ 2.69
TOP3A-219ENST00000584887 UGGT1Q9NYU2 1555 aa31.81■■■□□ 2.68
TOP3A-219ENST00000584887 POLR1AO95602 1720 aaPredicted RBP31.81■■■□□ 2.68
TOP3A-219ENST00000584887 THEMISQ8N1K5 641 aaPredicted RBP31.81■■■□□ 2.68
TOP3A-219ENST00000584887 CHIC2Q9UKJ5 165 aa31.8■■■□□ 2.68
TOP3A-219ENST00000584887 ERVK-7P63135 1459 aa31.79■■■□□ 2.68
TOP3A-219ENST00000584887 ANKLE2Q86XL3 938 aa31.79■■■□□ 2.68
TOP3A-219ENST00000584887 ERBINQ96RT1 1412 aa31.79■■■□□ 2.68
TOP3A-219ENST00000584887 SPATA31D1Q6ZQQ2 1576 aa31.78■■■□□ 2.68
TOP3A-219ENST00000584887 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.78■■■□□ 2.68
TOP3A-219ENST00000584887 NEURL4Q96JN8 1562 aa31.77■■■□□ 2.68
TOP3A-219ENST00000584887 CFAP65Q6ZU64 1925 aaKnown RBP31.76■■■□□ 2.67
TOP3A-219ENST00000584887 ANKRD30AQ9BXX3 1397 aa31.74■■■□□ 2.67
TOP3A-219ENST00000584887 PRDM15P57071 1507 aaPredicted RBP31.74■■■□□ 2.67
TOP3A-219ENST00000584887 FAM50AQ14320 339 aaKnown RBP31.73■■■□□ 2.67
TOP3A-219ENST00000584887 UBAP1LF5GYI3 381 aa31.72■■■□□ 2.67
TOP3A-219ENST00000584887 KANK1Q14678 1352 aa31.69■■■□□ 2.66
TOP3A-219ENST00000584887 NPHP4O75161 1426 aaPredicted RBP31.68■■■□□ 2.66
TOP3A-219ENST00000584887 DEPDC5O75140 1603 aa31.64■■■□□ 2.66
TOP3A-219ENST00000584887 ARHGAP31Q2M1Z3 1444 aa31.63■■■□□ 2.65
TOP3A-219ENST00000584887 MED14O60244 1454 aa31.61■■■□□ 2.65
TOP3A-219ENST00000584887 CPS1P31327 1500 aa31.6■■■□□ 2.65
TOP3A-219ENST00000584887 IQGAP1P46940 1657 aa31.6■■■□□ 2.65
TOP3A-219ENST00000584887 UBR1Q8IWV7 1749 aa31.59■■■□□ 2.65
TOP3A-219ENST00000584887 DISP3Q9P2K9 1392 aa31.58■■■□□ 2.65
TOP3A-219ENST00000584887 VWDEQ8N2E2 1590 aa31.57■■■□□ 2.64
TOP3A-219ENST00000584887 ADGRL2O95490 1459 aa31.57■■■□□ 2.64
TOP3A-219ENST00000584887 SCAF1Q9H7N4 1312 aaKnown RBP31.55■■■□□ 2.64
TOP3A-219ENST00000584887 STAG3Q9UJ98 1225 aa31.53■■■□□ 2.64
TOP3A-219ENST00000584887 SCAF11Q99590 1463 aaKnown RBP31.52■■■□□ 2.64
TOP3A-219ENST00000584887 LMTK2Q8IWU2 1503 aa31.51■■■□□ 2.63
TOP3A-219ENST00000584887 TXNDC2Q86VQ3 553 aa31.5■■■□□ 2.63
TOP3A-219ENST00000584887 ANKRD50Q9ULJ7 1429 aa31.49■■■□□ 2.63
TOP3A-219ENST00000584887 PIK3C2BO00750 1634 aa31.49■■■□□ 2.63
TOP3A-219ENST00000584887 PIP4K2BP78356 416 aa31.49■■■□□ 2.63
TOP3A-219ENST00000584887 LTKP29376 864 aa31.47■■■□□ 2.63
TOP3A-219ENST00000584887 EID1Q9Y6B2 187 aa31.47■■■□□ 2.63
TOP3A-219ENST00000584887 ARHGAP23Q9P227 1491 aa31.46■■■□□ 2.63
TOP3A-219ENST00000584887 SLIT1O75093 1534 aa31.46■■■□□ 2.63
TOP3A-219ENST00000584887 EFCAB6Q5THR3 1501 aa31.46■■■□□ 2.63
TOP3A-219ENST00000584887 TOM1O60784 492 aa31.46■■■□□ 2.63
TOP3A-219ENST00000584887 PPARGC1BQ86YN6 1023 aaKnown RBP31.44■■■□□ 2.62
TOP3A-219ENST00000584887 IDI1Q13907 227 aa31.43■■■□□ 2.62
TOP3A-219ENST00000584887 SYNMO15061 1565 aa31.42■■■□□ 2.62
TOP3A-219ENST00000584887 TMEM2Q9UHN6 1383 aa31.42■■■□□ 2.62
TOP3A-219ENST00000584887 STRCP1A6NGW2 1772 aa31.4■■■□□ 2.62
TOP3A-219ENST00000584887 NOS1P29475 1434 aa31.39■■■□□ 2.62
TOP3A-219ENST00000584887 ITGAEP38570 1179 aa31.38■■■□□ 2.61
TOP3A-219ENST00000584887 LRRC7Q96NW7 1537 aa31.36■■■□□ 2.61
TOP3A-219ENST00000584887 HSPA1LP34931 641 aa31.35■■■□□ 2.61
TOP3A-219ENST00000584887 ILDR2Q71H61 639 aa31.33■■■□□ 2.61
TOP3A-219ENST00000584887 ADGRB3O60242 1522 aa31.33■■■□□ 2.61
TOP3A-219ENST00000584887 KDM5AP29375 1690 aaKnown RBP31.32■■■□□ 2.6
TOP3A-219ENST00000584887 RPRD2Q5VT52 1461 aaKnown RBP31.32■■■□□ 2.6
TOP3A-219ENST00000584887 TET3O43151 1660 aa31.32■■■□□ 2.6
TOP3A-219ENST00000584887 SLC52A1Q9NWF4 448 aa31.31■■■□□ 2.6
TOP3A-219ENST00000584887 ROCK1Q13464 1354 aa31.3■■■□□ 2.6
TOP3A-219ENST00000584887 UNC13BO14795 1591 aa31.29■■■□□ 2.6
TOP3A-219ENST00000584887 SENP3Q9H4L4 574 aaPredicted RBP31.27■■■□□ 2.6
TOP3A-219ENST00000584887 BCANQ96GW7 911 aa31.26■■■□□ 2.59
TOP3A-219ENST00000584887 ALKQ9UM73 1620 aa31.26■■■□□ 2.59
TOP3A-219ENST00000584887 GCC2Q8IWJ2 1684 aa31.25■■■□□ 2.59
TOP3A-219ENST00000584887 SLC26A8Q96RN1 970 aa31.24■■■□□ 2.59
TOP3A-219ENST00000584887 CHGAP10645 457 aaKnown RBP31.21■■■□□ 2.59
TOP3A-219ENST00000584887 NUP155O75694 1391 aa31.18■■■□□ 2.58
TOP3A-219ENST00000584887 PPP1R15AO75807 674 aaPredicted RBP31.18■■■□□ 2.58
TOP3A-219ENST00000584887 MYO5BQ9ULV0 1848 aa31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms