RNA–Protein interactions for RNA: ENST00000584876.1

TRAPPC8-213, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-213ENST00000584876 A2ML1A8K2U0 1454 aa36.6■■■■□ 3.45
TRAPPC8-213ENST00000584876 DNMT1P26358 1616 aaKnown RBP36.59■■■■□ 3.45
TRAPPC8-213ENST00000584876 LRRC9Q6ZRR7 1453 aa36.58■■■■□ 3.45
TRAPPC8-213ENST00000584876 ZNF335Q9H4Z2 1342 aaPredicted RBP36.56■■■■□ 3.44
TRAPPC8-213ENST00000584876 PZPP20742 1482 aa36.54■■■■□ 3.44
TRAPPC8-213ENST00000584876 TNRQ92752 1358 aa36.52■■■■□ 3.44
TRAPPC8-213ENST00000584876 LOC105371045A0A1W2PR82 267 aa36.51■■■■□ 3.44
TRAPPC8-213ENST00000584876 TSPY4P0CV99 314 aa36.51■■■■□ 3.44
TRAPPC8-213ENST00000584876 TSPY10P0CW01 314 aa36.51■■■■□ 3.44
TRAPPC8-213ENST00000584876 POLR1AO95602 1720 aaPredicted RBP36.51■■■■□ 3.43
TRAPPC8-213ENST00000584876 FBXO31Q5XUX0 539 aaPredicted RBP36.49■■■■□ 3.43
TRAPPC8-213ENST00000584876 WASHC2CQ9Y4E1 1318 aa36.49■■■■□ 3.43
TRAPPC8-213ENST00000584876 MAST1Q9Y2H9 1570 aa36.47■■■■□ 3.43
TRAPPC8-213ENST00000584876 DISP3Q9P2K9 1392 aa36.46■■■■□ 3.43
TRAPPC8-213ENST00000584876 MAP3K1Q13233 1512 aa36.44■■■■□ 3.42
TRAPPC8-213ENST00000584876 RNF17Q9BXT8 1623 aaKnown RBP36.43■■■■□ 3.42
TRAPPC8-213ENST00000584876 NEURL4Q96JN8 1562 aa36.4■■■■□ 3.42
TRAPPC8-213ENST00000584876 KANK4Q5T7N3 995 aaPredicted RBP36.39■■■■□ 3.42
TRAPPC8-213ENST00000584876 SPATA31D1Q6ZQQ2 1576 aa36.38■■■■□ 3.41
TRAPPC8-213ENST00000584876 ZC3H13Q5T200 1668 aaKnown RBP36.38■■■■□ 3.41
TRAPPC8-213ENST00000584876 EIF2AK4Q9P2K8 1649 aaKnown RBP36.37■■■■□ 3.41
TRAPPC8-213ENST00000584876 MYOM3Q5VTT5 1437 aa36.37■■■■□ 3.41
TRAPPC8-213ENST00000584876 NLRP1Q9C000 1473 aa36.37■■■■□ 3.41
TRAPPC8-213ENST00000584876 MIA2Q96PC5 1412 aa36.36■■■■□ 3.41
TRAPPC8-213ENST00000584876 UBAP1LF5GYI3 381 aa36.34■■■■□ 3.41
TRAPPC8-213ENST00000584876 ABCC3O15438 1527 aa36.34■■■■□ 3.41
TRAPPC8-213ENST00000584876 UGGT1Q9NYU2 1555 aa36.32■■■■□ 3.41
TRAPPC8-213ENST00000584876 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP36.3■■■■□ 3.4
TRAPPC8-213ENST00000584876 MROH1Q8NDA8 1641 aa36.28■■■■□ 3.4
TRAPPC8-213ENST00000584876 CEP152O94986 1710 aa36.28■■■■□ 3.4
TRAPPC8-213ENST00000584876 THEMISQ8N1K5 641 aaPredicted RBP36.27■■■■□ 3.4
TRAPPC8-213ENST00000584876 ILDR2Q71H61 639 aa36.26■■■■□ 3.4
TRAPPC8-213ENST00000584876 ANKLE2Q86XL3 938 aa36.26■■■■□ 3.4
TRAPPC8-213ENST00000584876 CPS1P31327 1500 aa36.25■■■■□ 3.39
TRAPPC8-213ENST00000584876 DEPDC5O75140 1603 aa36.25■■■■□ 3.39
TRAPPC8-213ENST00000584876 DUOX2Q9NRD8 1548 aa36.24■■■■□ 3.39
TRAPPC8-213ENST00000584876 CROCC2H7BZ55 1655 aa36.23■■■■□ 3.39
TRAPPC8-213ENST00000584876 SHANK2Q9UPX8 1470 aa36.23■■■■□ 3.39
TRAPPC8-213ENST00000584876 CFAP65Q6ZU64 1925 aaKnown RBP36.22■■■■□ 3.39
TRAPPC8-213ENST00000584876 ERVK-7P63135 1459 aa36.21■■■■□ 3.39
TRAPPC8-213ENST00000584876 MED14O60244 1454 aa36.19■■■■□ 3.38
TRAPPC8-213ENST00000584876 NPHP4O75161 1426 aaPredicted RBP36.19■■■■□ 3.38
TRAPPC8-213ENST00000584876 VWDEQ8N2E2 1590 aa36.19■■■■□ 3.38
TRAPPC8-213ENST00000584876 IQGAP1P46940 1657 aa36.18■■■■□ 3.38
TRAPPC8-213ENST00000584876 PTPN23Q9H3S7 1636 aa36.18■■■■□ 3.38
TRAPPC8-213ENST00000584876 KIF15Q9NS87 1388 aa36.13■■■■□ 3.37
TRAPPC8-213ENST00000584876 ABCC5O15440 1437 aa36.12■■■■□ 3.37
TRAPPC8-213ENST00000584876 APLP2Q06481 763 aa36.12■■■■□ 3.37
TRAPPC8-213ENST00000584876 PRDM15P57071 1507 aaPredicted RBP36.12■■■■□ 3.37
TRAPPC8-213ENST00000584876 UBR1Q8IWV7 1749 aa36.11■■■■□ 3.37
TRAPPC8-213ENST00000584876 ERBINQ96RT1 1412 aa36.09■■■■□ 3.37
TRAPPC8-213ENST00000584876 SCAF1Q9H7N4 1312 aaKnown RBP36.08■■■■□ 3.37
TRAPPC8-213ENST00000584876 SOCS7O14512 581 aa36.06■■■■□ 3.36
TRAPPC8-213ENST00000584876 TOM1O60784 492 aa36.06■■■■□ 3.36
TRAPPC8-213ENST00000584876 DAPK1P53355 1430 aa36.06■■■■□ 3.36
TRAPPC8-213ENST00000584876 RRP7BPQ9NSQ0 103 aa36.05■■■■□ 3.36
TRAPPC8-213ENST00000584876 PIP4K2BP78356 416 aa36.04■■■■□ 3.36
TRAPPC8-213ENST00000584876 FGD6Q6ZV73 1430 aa36.03■■■■□ 3.36
TRAPPC8-213ENST00000584876 STRCP1A6NGW2 1772 aa36.03■■■■□ 3.36
TRAPPC8-213ENST00000584876 ARHGAP31Q2M1Z3 1444 aa36.02■■■■□ 3.36
TRAPPC8-213ENST00000584876 SCAF11Q99590 1463 aaKnown RBP35.97■■■■□ 3.35
TRAPPC8-213ENST00000584876 SYNMO15061 1565 aa35.97■■■■□ 3.35
TRAPPC8-213ENST00000584876 HSPA1LP34931 641 aa35.96■■■■□ 3.35
TRAPPC8-213ENST00000584876 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.96■■■■□ 3.353e-6■□□□□ 9.2
TRAPPC8-213ENST00000584876 ALKQ9UM73 1620 aa35.94■■■■□ 3.34
TRAPPC8-213ENST00000584876 SLIT1O75093 1534 aa35.93■■■■□ 3.34
TRAPPC8-213ENST00000584876 ARHGAP23Q9P227 1491 aa35.93■■■■□ 3.34
TRAPPC8-213ENST00000584876 KANK1Q14678 1352 aa35.92■■■■□ 3.34
TRAPPC8-213ENST00000584876 PIK3C2BO00750 1634 aa35.92■■■■□ 3.34
TRAPPC8-213ENST00000584876 ANKRD30AQ9BXX3 1397 aa35.91■■■■□ 3.34
TRAPPC8-213ENST00000584876 LRRC7Q96NW7 1537 aa35.91■■■■□ 3.34
TRAPPC8-213ENST00000584876 CHIC2Q9UKJ5 165 aa35.89■■■■□ 3.34
TRAPPC8-213ENST00000584876 MED1Q15648 1581 aaPredicted RBP35.86■■■■□ 3.33
TRAPPC8-213ENST00000584876 LTKP29376 864 aa35.86■■■■□ 3.33
TRAPPC8-213ENST00000584876 LMTK2Q8IWU2 1503 aa35.86■■■■□ 3.33
TRAPPC8-213ENST00000584876 TXNDC2Q86VQ3 553 aa35.85■■■■□ 3.33
TRAPPC8-213ENST00000584876 KDM5AP29375 1690 aaKnown RBP35.82■■■■□ 3.33
TRAPPC8-213ENST00000584876 EID1Q9Y6B2 187 aa35.81■■■■□ 3.32
TRAPPC8-213ENST00000584876 STAG3Q9UJ98 1225 aa35.79■■■■□ 3.32
TRAPPC8-213ENST00000584876 ADGRL2O95490 1459 aa35.79■■■■□ 3.32
TRAPPC8-213ENST00000584876 TMEM2Q9UHN6 1383 aa35.78■■■■□ 3.32
TRAPPC8-213ENST00000584876 EFCAB6Q5THR3 1501 aa35.78■■■■□ 3.32
TRAPPC8-213ENST00000584876 XIRP1Q702N8 1843 aaKnown RBP35.76■■■■□ 3.31
TRAPPC8-213ENST00000584876 IDI1Q13907 227 aa35.71■■■■□ 3.31
TRAPPC8-213ENST00000584876 FAM50AQ14320 339 aaKnown RBP35.71■■■■□ 3.31
TRAPPC8-213ENST00000584876 NOS1P29475 1434 aa35.7■■■■□ 3.31
TRAPPC8-213ENST00000584876 ADGRB3O60242 1522 aa35.68■■■■□ 3.3
TRAPPC8-213ENST00000584876 SENP3Q9H4L4 574 aaPredicted RBP35.67■■■■□ 3.3
TRAPPC8-213ENST00000584876 ANKRD50Q9ULJ7 1429 aa35.65■■■■□ 3.3
TRAPPC8-213ENST00000584876 RPRD2Q5VT52 1461 aaKnown RBP35.6■■■■□ 3.29
TRAPPC8-213ENST00000584876 TET3O43151 1660 aa35.6■■■■□ 3.29
TRAPPC8-213ENST00000584876 MYO5BQ9ULV0 1848 aa35.58■■■■□ 3.29
TRAPPC8-213ENST00000584876 SLC52A1Q9NWF4 448 aa35.58■■■■□ 3.29
TRAPPC8-213ENST00000584876 PHF23Q9BUL5 403 aaPredicted RBP35.56■■■■□ 3.28
TRAPPC8-213ENST00000584876 GCC2Q8IWJ2 1684 aa35.56■■■■□ 3.28
TRAPPC8-213ENST00000584876 SLC26A8Q96RN1 970 aa35.54■■■■□ 3.28
TRAPPC8-213ENST00000584876 UNC13BO14795 1591 aa35.53■■■■□ 3.28
TRAPPC8-213ENST00000584876 KCNA6P17658 529 aa35.53■■■■□ 3.28
TRAPPC8-213ENST00000584876 TMEM94Q12767 1356 aa35.52■■■■□ 3.28
TRAPPC8-213ENST00000584876 NWD1Q149M9 1564 aa35.51■■■■□ 3.27
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms