RNA–Protein interactions for RNA: ENST00000584668.5

SRSF1-207, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 758 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-207ENST00000584668 PZPP20742 1482 aa13.69□□□□□ -0.22
SRSF1-207ENST00000584668 SHANK2Q9UPX8 1470 aa13.69□□□□□ -0.22
SRSF1-207ENST00000584668 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
SRSF1-207ENST00000584668 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-207ENST00000584668 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
SRSF1-207ENST00000584668 TNRQ92752 1358 aa13.69□□□□□ -0.22
SRSF1-207ENST00000584668 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
SRSF1-207ENST00000584668 DEPDC5O75140 1603 aa13.68□□□□□ -0.22
SRSF1-207ENST00000584668 NLRP1Q9C000 1473 aa13.67□□□□□ -0.22
SRSF1-207ENST00000584668 SYNMO15061 1565 aa13.66□□□□□ -0.22
SRSF1-207ENST00000584668 IQGAP1P46940 1657 aa13.66□□□□□ -0.22
SRSF1-207ENST00000584668 HSPA1LP34931 641 aa13.66□□□□□ -0.22
SRSF1-207ENST00000584668 DHX29Q7Z478 1369 aaKnown RBP13.66□□□□□ -0.22
SRSF1-207ENST00000584668 CCDC141Q6ZP82 1450 aa13.66□□□□□ -0.22
SRSF1-207ENST00000584668 UGGT1Q9NYU2 1555 aa13.66□□□□□ -0.22
SRSF1-207ENST00000584668 ZC3H13Q5T200 1668 aaKnown RBP13.66□□□□□ -0.22
SRSF1-207ENST00000584668 RNF17Q9BXT8 1623 aaKnown RBP13.65□□□□□ -0.22
SRSF1-207ENST00000584668 ANKLE2Q86XL3 938 aa13.65□□□□□ -0.22
SRSF1-207ENST00000584668 THEMISQ8N1K5 641 aaPredicted RBP13.64□□□□□ -0.23
SRSF1-207ENST00000584668 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
SRSF1-207ENST00000584668 VWDEQ8N2E2 1590 aa13.62□□□□□ -0.23
SRSF1-207ENST00000584668 MED14O60244 1454 aa13.62□□□□□ -0.23
SRSF1-207ENST00000584668 MBD5Q9P267 1494 aa13.62□□□□□ -0.23
SRSF1-207ENST00000584668 KIF3BO15066 747 aa13.62□□□□□ -0.23
SRSF1-207ENST00000584668 RSPH4AQ5TD94 716 aa13.62□□□□□ -0.23
SRSF1-207ENST00000584668 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
SRSF1-207ENST00000584668 NPHP4O75161 1426 aaPredicted RBP13.62□□□□□ -0.23
SRSF1-207ENST00000584668 CEP162Q5TB80 1403 aa13.62□□□□□ -0.23
SRSF1-207ENST00000584668 CAMSAP2Q08AD1 1489 aa13.61□□□□□ -0.23
SRSF1-207ENST00000584668 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.6□□□□□ -0.23
SRSF1-207ENST00000584668 MIA2Q96PC5 1412 aa13.59□□□□□ -0.23
SRSF1-207ENST00000584668 ARHGEF5Q12774 1597 aa13.58□□□□□ -0.23
SRSF1-207ENST00000584668 EIF2AK4Q9P2K8 1649 aaKnown RBP13.58□□□□□ -0.24
SRSF1-207ENST00000584668 ZNF644Q9H582 1327 aaPredicted RBP13.57□□□□□ -0.24
SRSF1-207ENST00000584668 TSPY4P0CV99 314 aa13.56□□□□□ -0.24
SRSF1-207ENST00000584668 TSPY10P0CW01 314 aa13.56□□□□□ -0.24
SRSF1-207ENST00000584668 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
SRSF1-207ENST00000584668 NCOA2Q15596 1464 aa13.55□□□□□ -0.24
SRSF1-207ENST00000584668 ABCC3O15438 1527 aa13.54□□□□□ -0.24
SRSF1-207ENST00000584668 LRRC7Q96NW7 1537 aa13.54□□□□□ -0.24
SRSF1-207ENST00000584668 UBR1Q8IWV7 1749 aa13.53□□□□□ -0.24
SRSF1-207ENST00000584668 STRCP1A6NGW2 1772 aa13.53□□□□□ -0.24
SRSF1-207ENST00000584668 MAST1Q9Y2H9 1570 aa13.52□□□□□ -0.25
SRSF1-207ENST00000584668 ALKQ9UM73 1620 aa13.52□□□□□ -0.25
SRSF1-207ENST00000584668 CEP152O94986 1710 aa13.51□□□□□ -0.25
SRSF1-207ENST00000584668 ERVK-7P63135 1459 aa13.51□□□□□ -0.25
SRSF1-207ENST00000584668 SCAF11Q99590 1463 aaKnown RBP13.51□□□□□ -0.25
SRSF1-207ENST00000584668 CFAP65Q6ZU64 1925 aaKnown RBP13.48□□□□□ -0.25
SRSF1-207ENST00000584668 SENP3Q9H4L4 574 aaPredicted RBP13.47□□□□□ -0.25
SRSF1-207ENST00000584668 EID1Q9Y6B2 187 aa13.47□□□□□ -0.25
SRSF1-207ENST00000584668 SLIT1O75093 1534 aa13.46□□□□□ -0.25
SRSF1-207ENST00000584668 DUOX2Q9NRD8 1548 aa13.46□□□□□ -0.25
SRSF1-207ENST00000584668 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
SRSF1-207ENST00000584668 MROH1Q8NDA8 1641 aa13.45□□□□□ -0.26
SRSF1-207ENST00000584668 PRDM15P57071 1507 aaPredicted RBP13.44□□□□□ -0.26
SRSF1-207ENST00000584668 XIRP1Q702N8 1843 aaKnown RBP13.44□□□□□ -0.26
SRSF1-207ENST00000584668 LRRC9Q6ZRR7 1453 aa13.44□□□□□ -0.26
SRSF1-207ENST00000584668 ARHGAP23Q9P227 1491 aa13.43□□□□□ -0.26
SRSF1-207ENST00000584668 TXNDC2Q86VQ3 553 aa13.42□□□□□ -0.26
SRSF1-207ENST00000584668 STAG3Q9UJ98 1225 aa13.42□□□□□ -0.26
SRSF1-207ENST00000584668 CROCC2H7BZ55 1655 aa13.41□□□□□ -0.26
SRSF1-207ENST00000584668 ARHGAP31Q2M1Z3 1444 aa13.41□□□□□ -0.26
SRSF1-207ENST00000584668 ERBINQ96RT1 1412 aa13.41□□□□□ -0.26
SRSF1-207ENST00000584668 KANK1Q14678 1352 aa13.41□□□□□ -0.26
SRSF1-207ENST00000584668 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
SRSF1-207ENST00000584668 FAM135BQ49AJ0 1406 aa13.4□□□□□ -0.26
SRSF1-207ENST00000584668 MYOM3Q5VTT5 1437 aa13.4□□□□□ -0.26
SRSF1-207ENST00000584668 PIK3C2BO00750 1634 aa13.4□□□□□ -0.26
SRSF1-207ENST00000584668 EFCAB6Q5THR3 1501 aa13.39□□□□□ -0.27
SRSF1-207ENST00000584668 NKTRP30414 1462 aaKnown RBP13.37□□□□□ -0.27
SRSF1-207ENST00000584668 KIF15Q9NS87 1388 aa13.37□□□□□ -0.27
SRSF1-207ENST00000584668 TMEM2Q9UHN6 1383 aa13.37□□□□□ -0.27
SRSF1-207ENST00000584668 MAP3K1Q13233 1512 aa13.36□□□□□ -0.27
SRSF1-207ENST00000584668 VPS8Q8N3P4 1428 aa13.36□□□□□ -0.27
SRSF1-207ENST00000584668 PHLPP1O60346 1717 aa13.36□□□□□ -0.27
SRSF1-207ENST00000584668 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
SRSF1-207ENST00000584668 LTKP29376 864 aa13.35□□□□□ -0.27
SRSF1-207ENST00000584668 NWD1Q149M9 1564 aa13.35□□□□□ -0.27
SRSF1-207ENST00000584668 MSH6P52701 1360 aa13.34□□□□□ -0.27
SRSF1-207ENST00000584668 RGS17Q9UGC6 210 aaPredicted RBP13.34□□□□□ -0.27
SRSF1-207ENST00000584668 ADGRB3O60242 1522 aa13.34□□□□□ -0.27
SRSF1-207ENST00000584668 KCNA6P17658 529 aa13.32□□□□□ -0.28
SRSF1-207ENST00000584668 LMTK2Q8IWU2 1503 aa13.32□□□□□ -0.28
SRSF1-207ENST00000584668 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
SRSF1-207ENST00000584668 SETD1AO15047 1707 aaKnown RBP13.31□□□□□ -0.28
SRSF1-207ENST00000584668 PROSER2Q86WR7 435 aaPredicted RBP13.31□□□□□ -0.28
SRSF1-207ENST00000584668 JCADQ9P266 1359 aa13.31□□□□□ -0.28
SRSF1-207ENST00000584668 BCANQ96GW7 911 aa13.3□□□□□ -0.28
SRSF1-207ENST00000584668 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.3□□□□□ -0.284e-18■■□□□ 13.4
SRSF1-207ENST00000584668 TET3O43151 1660 aa13.29□□□□□ -0.28
SRSF1-207ENST00000584668 POTEAQ6S8J7 498 aa13.28□□□□□ -0.28
SRSF1-207ENST00000584668 RRP7BPQ9NSQ0 103 aa13.28□□□□□ -0.28
SRSF1-207ENST00000584668 ANKRD30AQ9BXX3 1397 aa13.28□□□□□ -0.28
SRSF1-207ENST00000584668 HDGFP51858 240 aaKnown RBP13.27□□□□□ -0.29
SRSF1-207ENST00000584668 APLP2Q06481 763 aa13.27□□□□□ -0.29
SRSF1-207ENST00000584668 ABCC5O15440 1437 aa13.27□□□□□ -0.29
SRSF1-207ENST00000584668 DAPK1P53355 1430 aa13.27□□□□□ -0.29
SRSF1-207ENST00000584668 RPRD2Q5VT52 1461 aaKnown RBP13.27□□□□□ -0.29
SRSF1-207ENST00000584668 CHD2O14647 1828 aaKnown RBP13.27□□□□□ -0.29
SRSF1-207ENST00000584668 PPP1R15AO75807 674 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms