RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 CFAP65Q6ZU64 1925 aaKnown RBP13.97□□□□□ -0.17
RFFL-212ENST00000584655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.97□□□□□ -0.17
RFFL-212ENST00000584655 KIAA1107Q9UPP5 1409 aa13.96□□□□□ -0.17
RFFL-212ENST00000584655 ASXL2Q76L83 1435 aa13.96□□□□□ -0.17
RFFL-212ENST00000584655 CCDC7Q96M83 1385 aa13.96□□□□□ -0.18
RFFL-212ENST00000584655 RBM33Q96EV2 1170 aaKnown RBP13.95□□□□□ -0.18
RFFL-212ENST00000584655 CEBPAP49715 358 aaPredicted RBP13.95□□□□□ -0.18
RFFL-212ENST00000584655 CCDC146Q8IYE0 955 aa13.95□□□□□ -0.18
RFFL-212ENST00000584655 B4GALNT3Q6L9W6 998 aa13.93□□□□□ -0.18
RFFL-212ENST00000584655 ADGRF5Q8IZF2 1346 aa13.92□□□□□ -0.18
RFFL-212ENST00000584655 PZPP20742 1482 aa13.92□□□□□ -0.18
RFFL-212ENST00000584655 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
RFFL-212ENST00000584655 CCDC141Q6ZP82 1450 aa13.92□□□□□ -0.18
RFFL-212ENST00000584655 CD109Q6YHK3 1445 aa13.91□□□□□ -0.18
RFFL-212ENST00000584655 ARHGEF12Q9NZN5 1544 aa13.9□□□□□ -0.18
RFFL-212ENST00000584655 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.18
RFFL-212ENST00000584655 FANCAO15360 1455 aa13.9□□□□□ -0.18
RFFL-212ENST00000584655 FBLN1P23142 703 aa13.9□□□□□ -0.18
RFFL-212ENST00000584655 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
RFFL-212ENST00000584655 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
RFFL-212ENST00000584655 TCOF1Q13428 1488 aaKnown RBP13.89□□□□□ -0.19
RFFL-212ENST00000584655 KANK1Q14678 1352 aa13.89□□□□□ -0.19
RFFL-212ENST00000584655 SRPK2P78362 688 aaKnown RBP13.89□□□□□ -0.19
RFFL-212ENST00000584655 TTC37Q6PGP7 1564 aa13.89□□□□□ -0.19
RFFL-212ENST00000584655 ADGRL1O94910 1474 aa13.89□□□□□ -0.19
RFFL-212ENST00000584655 POGKQ9P215 609 aa13.88□□□□□ -0.19
RFFL-212ENST00000584655 RRP7AQ9Y3A4 280 aaKnown RBP13.88□□□□□ -0.19
RFFL-212ENST00000584655 TMF1P82094 1093 aa13.87□□□□□ -0.19
RFFL-212ENST00000584655 ABCC10Q5T3U5 1492 aa13.87□□□□□ -0.19
RFFL-212ENST00000584655 ZBTB7CA1YPR0 619 aa13.87□□□□□ -0.19
RFFL-212ENST00000584655 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.19
RFFL-212ENST00000584655 ABCA8O94911 1581 aa13.87□□□□□ -0.19
RFFL-212ENST00000584655 CABP2Q9NPB3 220 aa13.87□□□□□ -0.19
RFFL-212ENST00000584655 SLC12A5Q9H2X9 1139 aa13.86□□□□□ -0.19
RFFL-212ENST00000584655 MBD5Q9P267 1494 aa13.86□□□□□ -0.19
RFFL-212ENST00000584655 RPRD2Q5VT52 1461 aaKnown RBP13.86□□□□□ -0.19
RFFL-212ENST00000584655 PLIN1O60240 522 aa13.86□□□□□ -0.19
RFFL-212ENST00000584655 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.85□□□□□ -0.193e-6■■□□□ 13.9
RFFL-212ENST00000584655 CDCA7LQ96GN5 454 aa13.85□□□□□ -0.19
RFFL-212ENST00000584655 PLCH2O75038 1416 aa13.85□□□□□ -0.19
RFFL-212ENST00000584655 SLC24A1O60721 1099 aa13.84□□□□□ -0.19
RFFL-212ENST00000584655 IDI1Q13907 227 aa13.84□□□□□ -0.19
RFFL-212ENST00000584655 ABCC2Q92887 1545 aa13.83□□□□□ -0.2
RFFL-212ENST00000584655 DNMT1P26358 1616 aaKnown RBP13.81□□□□□ -0.2
RFFL-212ENST00000584655 CCER2I3L3R5 266 aa13.81□□□□□ -0.2
RFFL-212ENST00000584655 WDR43Q15061 677 aaKnown RBP eCLIP13.81□□□□□ -0.2
RFFL-212ENST00000584655 C14orf37Q86TY3 774 aa13.81□□□□□ -0.2
RFFL-212ENST00000584655 DISP3Q9P2K9 1392 aa13.81□□□□□ -0.2
RFFL-212ENST00000584655 WAPLQ7Z5K2 1190 aa13.8□□□□□ -0.2
RFFL-212ENST00000584655 SAMD9LQ8IVG5 1584 aa13.8□□□□□ -0.2
RFFL-212ENST00000584655 SLC26A8Q96RN1 970 aa13.8□□□□□ -0.2
RFFL-212ENST00000584655 SKAP1Q86WV1 359 aa13.8□□□□□ -0.2
RFFL-212ENST00000584655 WDR7Q9Y4E6 1490 aa13.79□□□□□ -0.2
RFFL-212ENST00000584655 U2SURPO15042 1029 aaKnown RBP13.79□□□□□ -0.2
RFFL-212ENST00000584655 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
RFFL-212ENST00000584655 MYT1Q01538 1121 aa13.79□□□□□ -0.2
RFFL-212ENST00000584655 NCKAP5LQ9HCH0 1330 aa13.77□□□□□ -0.2
RFFL-212ENST00000584655 CNTLNQ9NXG0 1405 aa13.77□□□□□ -0.21
RFFL-212ENST00000584655 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
RFFL-212ENST00000584655 FAM135AQ9P2D6 1515 aa13.77□□□□□ -0.21
RFFL-212ENST00000584655 TXNDC2Q86VQ3 553 aa13.76□□□□□ -0.21
RFFL-212ENST00000584655 CDC42BPAQ5VT25 1732 aa13.75□□□□□ -0.21
RFFL-212ENST00000584655 ERBINQ96RT1 1412 aa13.75□□□□□ -0.21
RFFL-212ENST00000584655 LMOD2Q6P5Q4 547 aa13.75□□□□□ -0.21
RFFL-212ENST00000584655 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
RFFL-212ENST00000584655 BCL2L13Q9BXK5 485 aa13.74□□□□□ -0.21
RFFL-212ENST00000584655 NUTM2GQ5VZR2 741 aa13.74□□□□□ -0.21
RFFL-212ENST00000584655 TEX14Q8IWB6 1497 aa13.74□□□□□ -0.21
RFFL-212ENST00000584655 ADAMTS8Q9UP79 889 aa13.74□□□□□ -0.21
RFFL-212ENST00000584655 YEATS2Q9ULM3 1422 aa13.74□□□□□ -0.21
RFFL-212ENST00000584655 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
RFFL-212ENST00000584655 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
RFFL-212ENST00000584655 MORC1Q86VD1 984 aa13.73□□□□□ -0.21
RFFL-212ENST00000584655 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
RFFL-212ENST00000584655 PLA2R1Q13018 1463 aa13.72□□□□□ -0.21
RFFL-212ENST00000584655 TESK2Q96S53 571 aa13.71□□□□□ -0.21
RFFL-212ENST00000584655 ZCCHC11Q5TAX3 1644 aaKnown RBP13.71□□□□□ -0.21
RFFL-212ENST00000584655 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
RFFL-212ENST00000584655 A2MP01023 1474 aa13.71□□□□□ -0.22
RFFL-212ENST00000584655 CCDC136Q96JN2 1154 aa13.7□□□□□ -0.22
RFFL-212ENST00000584655 NOS1P29475 1434 aa13.7□□□□□ -0.22
RFFL-212ENST00000584655 APAF1O14727 1248 aa13.7□□□□□ -0.22
RFFL-212ENST00000584655 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
RFFL-212ENST00000584655 DHX29Q7Z478 1369 aaKnown RBP13.69□□□□□ -0.22
RFFL-212ENST00000584655 FRAT1Q92837 279 aaPredicted RBP13.69□□□□□ -0.22
RFFL-212ENST00000584655 ITSN2Q9NZM3 1697 aa13.68□□□□□ -0.22
RFFL-212ENST00000584655 CANXP27824 592 aaKnown RBP13.68□□□□□ -0.22
RFFL-212ENST00000584655 PNISRQ8TF01 805 aaKnown RBP13.68□□□□□ -0.22
RFFL-212ENST00000584655 KDM5BQ9UGL1 1544 aa13.68□□□□□ -0.22
RFFL-212ENST00000584655 CDC42BPBQ9Y5S2 1711 aa13.68□□□□□ -0.22
RFFL-212ENST00000584655 TSPOAP1O95153 1857 aa13.67□□□□□ -0.22
RFFL-212ENST00000584655 CENPJQ9HC77 1338 aaPredicted RBP13.67□□□□□ -0.22
RFFL-212ENST00000584655 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
RFFL-212ENST00000584655 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.22
RFFL-212ENST00000584655 ADCY10Q96PN6 1610 aa13.67□□□□□ -0.22
RFFL-212ENST00000584655 NLRP13Q86W25 1043 aa13.66□□□□□ -0.22
RFFL-212ENST00000584655 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
RFFL-212ENST00000584655 MYBBP1AQ9BQG0 1328 aaKnown RBP13.65□□□□□ -0.22
RFFL-212ENST00000584655 ELL2O00472 640 aaPredicted RBP13.65□□□□□ -0.22
RFFL-212ENST00000584655 CLUAP1Q96AJ1 413 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms