RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 NPM1P06748 294 aaKnown RBP eCLIP17.44■□□□□ 0.38
ITGB4-212ENST00000584558 TEX14Q8IWB6 1497 aa17.44■□□□□ 0.38
ITGB4-212ENST00000584558 ABCA9Q8IUA7 1624 aa17.44■□□□□ 0.38
ITGB4-212ENST00000584558 RTL5Q5HYW3 569 aaPredicted RBP17.43■□□□□ 0.38
ITGB4-212ENST00000584558 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
ITGB4-212ENST00000584558 PPP4R2Q9NY27 417 aa17.42■□□□□ 0.38
ITGB4-212ENST00000584558 B4GALNT3Q6L9W6 998 aa17.41■□□□□ 0.38
ITGB4-212ENST00000584558 UNC13BO14795 1591 aa17.4■□□□□ 0.38
ITGB4-212ENST00000584558 EFCAB2Q5VUJ9 269 aa17.38■□□□□ 0.37
ITGB4-212ENST00000584558 ASXL2Q76L83 1435 aa17.38■□□□□ 0.37
ITGB4-212ENST00000584558 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
ITGB4-212ENST00000584558 NUP155O75694 1391 aa17.37■□□□□ 0.37
ITGB4-212ENST00000584558 TRAPPC8Q9Y2L5 1435 aa17.36■□□□□ 0.37
ITGB4-212ENST00000584558 DUOX2Q9NRD8 1548 aa17.36■□□□□ 0.37
ITGB4-212ENST00000584558 PKD2Q13563 968 aa17.35■□□□□ 0.37
ITGB4-212ENST00000584558 FAM135AQ9P2D6 1515 aa17.35■□□□□ 0.37
ITGB4-212ENST00000584558 MAGI2Q86UL8 1455 aa17.33■□□□□ 0.37
ITGB4-212ENST00000584558 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
ITGB4-212ENST00000584558 ERBINQ96RT1 1412 aa17.32■□□□□ 0.36
ITGB4-212ENST00000584558 ZFYVE16Q7Z3T8 1539 aa17.32■□□□□ 0.36
ITGB4-212ENST00000584558 FAM69CQ0P6D2 419 aa17.31■□□□□ 0.36
ITGB4-212ENST00000584558 RTEL1-TNFRSF6BF6WH68 1400 aa17.31■□□□□ 0.36
ITGB4-212ENST00000584558 FANCAO15360 1455 aa17.31■□□□□ 0.36
ITGB4-212ENST00000584558 UBE2Q2Q8WVN8 375 aa17.3■□□□□ 0.36
ITGB4-212ENST00000584558 INO80Q9ULG1 1556 aaPredicted RBP17.3■□□□□ 0.36
ITGB4-212ENST00000584558 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
ITGB4-212ENST00000584558 ANP32AP39687 249 aaKnown RBP17.29■□□□□ 0.36
ITGB4-212ENST00000584558 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
ITGB4-212ENST00000584558 ZBTB47Q9UFB7 747 aaPredicted RBP17.26■□□□□ 0.35
ITGB4-212ENST00000584558 IPO9Q96P70 1041 aaKnown RBP17.26■□□□□ 0.35
ITGB4-212ENST00000584558 ATP7AQ04656 1500 aa17.24■□□□□ 0.35
ITGB4-212ENST00000584558 ADGRL1O94910 1474 aa17.24■□□□□ 0.35
ITGB4-212ENST00000584558 DEPDC5O75140 1603 aa17.23■□□□□ 0.35
ITGB4-212ENST00000584558 AFAP1Q8N556 730 aa17.23■□□□□ 0.35
ITGB4-212ENST00000584558 HSPA5P11021 654 aaKnown RBP17.22■□□□□ 0.35
ITGB4-212ENST00000584558 PLA2R1Q13018 1463 aa17.22■□□□□ 0.35
ITGB4-212ENST00000584558 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
ITGB4-212ENST00000584558 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
ITGB4-212ENST00000584558 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
ITGB4-212ENST00000584558 SCAPERQ9BY12 1400 aa17.21■□□□□ 0.34
ITGB4-212ENST00000584558 CFAP74Q9C0B2 1584 aa17.2■□□□□ 0.34
ITGB4-212ENST00000584558 ATP10AO60312 1499 aa17.2■□□□□ 0.34
ITGB4-212ENST00000584558 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
ITGB4-212ENST00000584558 KIDINS220Q9ULH0 1771 aa17.18■□□□□ 0.34
ITGB4-212ENST00000584558 EIF2AK4Q9P2K8 1649 aaKnown RBP17.18■□□□□ 0.34
ITGB4-212ENST00000584558 POLR1AO95602 1720 aaPredicted RBP17.17■□□□□ 0.34
ITGB4-212ENST00000584558 EIF5BO60841 1220 aaKnown RBP17.17■□□□□ 0.34
ITGB4-212ENST00000584558 VWDEQ8N2E2 1590 aa17.17■□□□□ 0.34
ITGB4-212ENST00000584558 CD109Q6YHK3 1445 aa17.16■□□□□ 0.34
ITGB4-212ENST00000584558 KDM5CP41229 1560 aa17.16■□□□□ 0.34
ITGB4-212ENST00000584558 TSPOAP1O95153 1857 aa17.16■□□□□ 0.34
ITGB4-212ENST00000584558 E9PCH4 1651 aa17.16■□□□□ 0.34
ITGB4-212ENST00000584558 RALGAPBQ86X10 1494 aa17.15■□□□□ 0.34
ITGB4-212ENST00000584558 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
ITGB4-212ENST00000584558 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.34
ITGB4-212ENST00000584558 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.34
ITGB4-212ENST00000584558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.14■□□□□ 0.33
ITGB4-212ENST00000584558 ZNF518AQ6AHZ1 1483 aa17.14■□□□□ 0.33
ITGB4-212ENST00000584558 RAPGEF3O95398 923 aa17.14■□□□□ 0.33
ITGB4-212ENST00000584558 CCDC144AA2RUR9 1427 aa17.13■□□□□ 0.33
ITGB4-212ENST00000584558 LAS1LQ9Y4W2 734 aaKnown RBP17.13■□□□□ 0.33
ITGB4-212ENST00000584558 NEFMP07197 916 aa17.12■□□□□ 0.33
ITGB4-212ENST00000584558 CCDC184Q52MB2 194 aa17.12■□□□□ 0.33
ITGB4-212ENST00000584558 PRDM15P57071 1507 aaPredicted RBP17.12■□□□□ 0.33
ITGB4-212ENST00000584558 TET3O43151 1660 aa17.12■□□□□ 0.33
ITGB4-212ENST00000584558 POGZQ7Z3K3 1410 aa17.12■□□□□ 0.33
ITGB4-212ENST00000584558 DHX29Q7Z478 1369 aaKnown RBP17.12■□□□□ 0.33
ITGB4-212ENST00000584558 NPM2Q86SE8 214 aaKnown RBP17.11■□□□□ 0.33
ITGB4-212ENST00000584558 MAP3K4Q9Y6R4 1608 aa17.11■□□□□ 0.33
ITGB4-212ENST00000584558 C11orf95C9JLR9 678 aaPredicted RBP17.1■□□□□ 0.33
ITGB4-212ENST00000584558 NEO1Q92859 1461 aa17.09■□□□□ 0.33
ITGB4-212ENST00000584558 A2MP01023 1474 aa17.09■□□□□ 0.33
ITGB4-212ENST00000584558 MLH3Q9UHC1 1453 aa17.09■□□□□ 0.33
ITGB4-212ENST00000584558 GLI2P10070 1586 aa17.09■□□□□ 0.33
ITGB4-212ENST00000584558 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.33
ITGB4-212ENST00000584558 CCDC7Q96M83 1385 aa17.08■□□□□ 0.33
ITGB4-212ENST00000584558 SPHKAPQ2M3C7 1700 aa17.08■□□□□ 0.32
ITGB4-212ENST00000584558 BCORL1Q5H9F3 1711 aa17.08■□□□□ 0.32
ITGB4-212ENST00000584558 TRPM2O94759 1503 aa17.08■□□□□ 0.32
ITGB4-212ENST00000584558 DIP2BQ9P265 1576 aa17.07■□□□□ 0.32
ITGB4-212ENST00000584558 PTPRTO14522 1441 aa17.07■□□□□ 0.32
ITGB4-212ENST00000584558 RNF17Q9BXT8 1623 aaKnown RBP17.07■□□□□ 0.32
ITGB4-212ENST00000584558 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
ITGB4-212ENST00000584558 HECW2Q9P2P5 1572 aa17.07■□□□□ 0.32
ITGB4-212ENST00000584558 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
ITGB4-212ENST00000584558 PRAG1Q86YV5 1406 aa17.06■□□□□ 0.32
ITGB4-212ENST00000584558 USP47Q96K76 1375 aa17.06■□□□□ 0.32
ITGB4-212ENST00000584558 CEP152O94986 1710 aa17.05■□□□□ 0.32
ITGB4-212ENST00000584558 CNTLNQ9NXG0 1405 aa17.05■□□□□ 0.32
ITGB4-212ENST00000584558 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
ITGB4-212ENST00000584558 ABCA6Q8N139 1617 aa17.04■□□□□ 0.32
ITGB4-212ENST00000584558 DCAF11Q8TEB1 546 aa17.04■□□□□ 0.32
ITGB4-212ENST00000584558 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
ITGB4-212ENST00000584558 KIF13AQ9H1H9 1805 aa17.03■□□□□ 0.32
ITGB4-212ENST00000584558 LMTK2Q8IWU2 1503 aa17.03■□□□□ 0.32
ITGB4-212ENST00000584558 ZNF326Q5BKZ1 582 aaKnown RBP17.03■□□□□ 0.32
ITGB4-212ENST00000584558 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
ITGB4-212ENST00000584558 LAMC1P11047 1609 aa17.03■□□□□ 0.32
ITGB4-212ENST00000584558 RICTORQ6R327 1708 aa17.03■□□□□ 0.32
ITGB4-212ENST00000584558 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms