RNA–Protein interactions for RNA: ENST00000584439.1

CTC1-212, Transcript of CST telomere replication complex component 1, humanhuman

TSL 4

Gene CTC1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-212ENST00000584439 TAOK2Q9UL54 1235 aa10.6□□□□□ -0.71
CTC1-212ENST00000584439 CDC42BPAQ5VT25 1732 aa10.6□□□□□ -0.71
CTC1-212ENST00000584439 PREX2Q70Z35 1606 aa10.59□□□□□ -0.71
CTC1-212ENST00000584439 BCANQ96GW7 911 aa10.59□□□□□ -0.71
CTC1-212ENST00000584439 LRRC7Q96NW7 1537 aa10.58□□□□□ -0.72
CTC1-212ENST00000584439 IQGAP1P46940 1657 aa10.58□□□□□ -0.72
CTC1-212ENST00000584439 A2ML1A8K2U0 1454 aa10.58□□□□□ -0.72
CTC1-212ENST00000584439 SAMD9LQ8IVG5 1584 aa10.56□□□□□ -0.72
CTC1-212ENST00000584439 CNKSR2Q8WXI2 1034 aa10.55□□□□□ -0.72
CTC1-212ENST00000584439 UPF1Q92900 1129 aaKnown RBP eCLIP10.55□□□□□ -0.72
CTC1-212ENST00000584439 PLXNC1O60486 1568 aa10.55□□□□□ -0.72
CTC1-212ENST00000584439 CFAP65Q6ZU64 1925 aaKnown RBP10.54□□□□□ -0.72
CTC1-212ENST00000584439 ZC3H13Q5T200 1668 aaKnown RBP10.54□□□□□ -0.72
CTC1-212ENST00000584439 SYNMO15061 1565 aa10.54□□□□□ -0.72
CTC1-212ENST00000584439 DEPDC5O75140 1603 aa10.54□□□□□ -0.72
CTC1-212ENST00000584439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.52□□□□□ -0.72
CTC1-212ENST00000584439 HAP1P54257 671 aaPredicted RBP10.52□□□□□ -0.73
CTC1-212ENST00000584439 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
CTC1-212ENST00000584439 ROBO1Q9Y6N7 1651 aa10.52□□□□□ -0.73
CTC1-212ENST00000584439 FBXO31Q5XUX0 539 aaPredicted RBP10.51□□□□□ -0.73
CTC1-212ENST00000584439 GGT6Q6P531 493 aa10.51□□□□□ -0.73
CTC1-212ENST00000584439 DAXXQ9UER7 740 aaPredicted RBP10.51□□□□□ -0.73
CTC1-212ENST00000584439 INO80Q9ULG1 1556 aaPredicted RBP10.51□□□□□ -0.73
CTC1-212ENST00000584439 NPHP4O75161 1426 aaPredicted RBP10.5□□□□□ -0.73
CTC1-212ENST00000584439 TROQ12816 1431 aaPredicted RBP10.5□□□□□ -0.73
CTC1-212ENST00000584439 MED14O60244 1454 aa10.5□□□□□ -0.73
CTC1-212ENST00000584439 ATP7AQ04656 1500 aa10.49□□□□□ -0.73
CTC1-212ENST00000584439 SYCP2Q9BX26 1530 aa10.49□□□□□ -0.73
CTC1-212ENST00000584439 ADGBQ8N7X0 1667 aa10.49□□□□□ -0.73
CTC1-212ENST00000584439 PHLPP1O60346 1717 aa10.47□□□□□ -0.73
CTC1-212ENST00000584439 ANKLE2Q86XL3 938 aa10.47□□□□□ -0.73
CTC1-212ENST00000584439 A2MP01023 1474 aa10.47□□□□□ -0.73
CTC1-212ENST00000584439 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
CTC1-212ENST00000584439 TNRQ92752 1358 aa10.46□□□□□ -0.74
CTC1-212ENST00000584439 UGGT1Q9NYU2 1555 aa10.46□□□□□ -0.74
CTC1-212ENST00000584439 HNRNPMP52272 730 aaKnown RBP eCLIP10.45□□□□□ -0.74
CTC1-212ENST00000584439 SPAG9O60271 1321 aaKnown RBP10.44□□□□□ -0.74
CTC1-212ENST00000584439 TPRNQ4KMQ1 711 aa10.44□□□□□ -0.74
CTC1-212ENST00000584439 ZNF777Q9ULD5 760 aaPredicted RBP10.43□□□□□ -0.74
CTC1-212ENST00000584439 LRP6O75581 1613 aa10.43□□□□□ -0.74
CTC1-212ENST00000584439 CLIP1P30622 1438 aa10.42□□□□□ -0.74
CTC1-212ENST00000584439 FAM135BQ49AJ0 1406 aa10.42□□□□□ -0.74
CTC1-212ENST00000584439 UBR1Q8IWV7 1749 aa10.42□□□□□ -0.74
CTC1-212ENST00000584439 CDK11AQ9UQ88 783 aaPredicted RBP10.41□□□□□ -0.74
CTC1-212ENST00000584439 PZPP20742 1482 aa10.41□□□□□ -0.74
CTC1-212ENST00000584439 THEMISQ8N1K5 641 aaPredicted RBP10.4□□□□□ -0.74
CTC1-212ENST00000584439 SETBP1Q9Y6X0 1596 aa10.39□□□□□ -0.75
CTC1-212ENST00000584439 FAM135AQ9P2D6 1515 aa10.39□□□□□ -0.75
CTC1-212ENST00000584439 ARHGAP35Q9NRY4 1499 aa10.39□□□□□ -0.75
CTC1-212ENST00000584439 RBM33Q96EV2 1170 aaKnown RBP10.39□□□□□ -0.75
CTC1-212ENST00000584439 COL16A1Q07092 1604 aaPredicted RBP10.39□□□□□ -0.75
CTC1-212ENST00000584439 MIA2Q96PC5 1412 aa10.39□□□□□ -0.75
CTC1-212ENST00000584439 HOXD11P31277 338 aaPredicted RBP10.38□□□□□ -0.75
CTC1-212ENST00000584439 MAP3K1Q13233 1512 aa10.38□□□□□ -0.75
CTC1-212ENST00000584439 NLRP1Q9C000 1473 aa10.37□□□□□ -0.75
CTC1-212ENST00000584439 FMN1Q68DA7 1419 aa10.37□□□□□ -0.75
CTC1-212ENST00000584439 EP400Q96L91 3159 aa10.37□□□□□ -0.75
CTC1-212ENST00000584439 KDM5DQ9BY66 1539 aa10.37□□□□□ -0.75
CTC1-212ENST00000584439 GPATCH8Q9UKJ3 1502 aaKnown RBP10.36□□□□□ -0.75
CTC1-212ENST00000584439 CACNB1Q02641 598 aaPredicted RBP10.35□□□□□ -0.75
CTC1-212ENST00000584439 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
CTC1-212ENST00000584439 SHPRHQ149N8 1683 aa10.34□□□□□ -0.75
CTC1-212ENST00000584439 CEP152O94986 1710 aa10.34□□□□□ -0.75
CTC1-212ENST00000584439 LTKP29376 864 aa10.34□□□□□ -0.75
CTC1-212ENST00000584439 DCAF8L1A6NGE4 600 aa10.33□□□□□ -0.76
CTC1-212ENST00000584439 TMEM94Q12767 1356 aa10.33□□□□□ -0.76
CTC1-212ENST00000584439 JCADQ9P266 1359 aa10.33□□□□□ -0.76
CTC1-212ENST00000584439 NCOA2Q15596 1464 aa10.32□□□□□ -0.76
CTC1-212ENST00000584439 SCAF11Q99590 1463 aaKnown RBP10.32□□□□□ -0.76
CTC1-212ENST00000584439 KIF3BO15066 747 aa10.32□□□□□ -0.76
CTC1-212ENST00000584439 ZNF644Q9H582 1327 aaPredicted RBP10.32□□□□□ -0.76
CTC1-212ENST00000584439 RXRBP28702 533 aa10.31□□□□□ -0.76
CTC1-212ENST00000584439 VSIG10Q8N0Z9 540 aa10.31□□□□□ -0.76
CTC1-212ENST00000584439 KIAA1107Q9UPP5 1409 aa10.31□□□□□ -0.76
CTC1-212ENST00000584439 DHX29Q7Z478 1369 aaKnown RBP10.3□□□□□ -0.76
CTC1-212ENST00000584439 ZNF772Q68DY9 489 aaPredicted RBP10.3□□□□□ -0.76
CTC1-212ENST00000584439 RGS12O14924 1447 aa10.3□□□□□ -0.76
CTC1-212ENST00000584439 TIAM1Q13009 1591 aa10.3□□□□□ -0.76
CTC1-212ENST00000584439 WASHC2CQ9Y4E1 1318 aa10.3□□□□□ -0.76
CTC1-212ENST00000584439 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
CTC1-212ENST00000584439 ARHGAP23Q9P227 1491 aa10.3□□□□□ -0.76
CTC1-212ENST00000584439 MEX3CQ5U5Q3 659 aaKnown RBP10.29□□□□□ -0.76
CTC1-212ENST00000584439 KDM5AP29375 1690 aaKnown RBP10.28□□□□□ -0.76
CTC1-212ENST00000584439 SLIT1O75093 1534 aa10.28□□□□□ -0.76
CTC1-212ENST00000584439 PIK3C2BO00750 1634 aa10.28□□□□□ -0.76
CTC1-212ENST00000584439 ERVK-7P63135 1459 aa10.28□□□□□ -0.76
CTC1-212ENST00000584439 LRRC9Q6ZRR7 1453 aa10.28□□□□□ -0.76
CTC1-212ENST00000584439 MBD5Q9P267 1494 aa10.28□□□□□ -0.76
CTC1-212ENST00000584439 CHD2O14647 1828 aaKnown RBP10.28□□□□□ -0.76
CTC1-212ENST00000584439 TXNDC2Q86VQ3 553 aa10.27□□□□□ -0.77
CTC1-212ENST00000584439 ARXQ96QS3 562 aa10.27□□□□□ -0.77
CTC1-212ENST00000584439 CCDC18Q5T9S5 1454 aa10.27□□□□□ -0.77
CTC1-212ENST00000584439 DIP2AQ14689 1571 aa10.26□□□□□ -0.77
CTC1-212ENST00000584439 TET3O43151 1660 aa10.26□□□□□ -0.77
CTC1-212ENST00000584439 PLEKHH2Q8IVE3 1493 aa10.26□□□□□ -0.77
CTC1-212ENST00000584439 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
CTC1-212ENST00000584439 PROSER2Q86WR7 435 aaPredicted RBP10.26□□□□□ -0.77
CTC1-212ENST00000584439 SLAIN2Q9P270 581 aa10.26□□□□□ -0.77
CTC1-212ENST00000584439 CFDP1Q9UEE9 299 aaPredicted RBP10.26□□□□□ -0.77
CTC1-212ENST00000584439 ABCC3O15438 1527 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms