RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 SETQ01105 290 aaPredicted RBP16.13■□□□□ 0.17
RNF43-208ENST00000584437 PRKRIP1Q9H875 184 aaPredicted RBP16.13■□□□□ 0.17
RNF43-208ENST00000584437 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
RNF43-208ENST00000584437 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
RNF43-208ENST00000584437 TERF2IPQ9NYB0 399 aa16.13■□□□□ 0.17
RNF43-208ENST00000584437 GPS2Q13227 327 aa16.13■□□□□ 0.17
RNF43-208ENST00000584437 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
RNF43-208ENST00000584437 SLC4A3P48751 1232 aa16.12■□□□□ 0.17
RNF43-208ENST00000584437 A0A0U1RQG5 324 aaPredicted RBP16.12■□□□□ 0.17
RNF43-208ENST00000584437 E9PSI1 815 aa16.12■□□□□ 0.17
RNF43-208ENST00000584437 CHMP5Q9NZZ3 219 aa16.12■□□□□ 0.17
RNF43-208ENST00000584437 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
RNF43-208ENST00000584437 NOL8Q76FK4 1167 aaKnown RBP16.11■□□□□ 0.17
RNF43-208ENST00000584437 GOLGA6L19H0YKK7 550 aa16.11■□□□□ 0.17
RNF43-208ENST00000584437 SF3A1Q15459 793 aaKnown RBP16.11■□□□□ 0.17
RNF43-208ENST00000584437 STK26Q9P289 416 aa16.11■□□□□ 0.17
RNF43-208ENST00000584437 GORABQ5T7V8 394 aa16.1■□□□□ 0.17
RNF43-208ENST00000584437 CRBNQ96SW2 442 aa16.09■□□□□ 0.17
RNF43-208ENST00000584437 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
RNF43-208ENST00000584437 ISY1Q9ULR0 285 aaKnown RBP16.09■□□□□ 0.17
RNF43-208ENST00000584437 ZKSCAN2Q63HK3 967 aa16.09■□□□□ 0.17
RNF43-208ENST00000584437 BECN2A8MW95 431 aa16.08■□□□□ 0.16
RNF43-208ENST00000584437 ZNF771Q7L3S4 317 aaPredicted RBP16.08■□□□□ 0.16
RNF43-208ENST00000584437 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
RNF43-208ENST00000584437 FOXD4L5Q5VV16 416 aaPredicted RBP16.07■□□□□ 0.16
RNF43-208ENST00000584437 FOXD4L4Q8WXT5 416 aaPredicted RBP16.07■□□□□ 0.16
RNF43-208ENST00000584437 CECR2Q9BXF3 1484 aa16.06■□□□□ 0.16
RNF43-208ENST00000584437 FAM43AQ8N2R8 423 aa16.06■□□□□ 0.16
RNF43-208ENST00000584437 CCDC88BA6NC98 1476 aa16.06■□□□□ 0.16
RNF43-208ENST00000584437 ANKRD45Q5TZF3 282 aa16.05■□□□□ 0.16
RNF43-208ENST00000584437 CARMIL2Q6F5E8 1435 aa16.05■□□□□ 0.16
RNF43-208ENST00000584437 H3BQV1 296 aa16.05■□□□□ 0.16
RNF43-208ENST00000584437 IFFO2Q5TF58 517 aa16.05■□□□□ 0.16
RNF43-208ENST00000584437 RASSF8Q8NHQ8 419 aa16.05■□□□□ 0.16
RNF43-208ENST00000584437 REC8O95072 547 aa16.05■□□□□ 0.16
RNF43-208ENST00000584437 PLIN1O60240 522 aa16.04■□□□□ 0.16
RNF43-208ENST00000584437 TSR1Q2NL82 804 aaKnown RBP16.04■□□□□ 0.16
RNF43-208ENST00000584437 TEX35Q5T0J7 233 aa16.04■□□□□ 0.16
RNF43-208ENST00000584437 ABCC8Q09428 1581 aa16.03■□□□□ 0.16
RNF43-208ENST00000584437 TPM1P09493 284 aa16.03■□□□□ 0.16
RNF43-208ENST00000584437 FAM13BQ9NYF5 915 aa16.03■□□□□ 0.16
RNF43-208ENST00000584437 CCDC70Q6NSX1 233 aa16.03■□□□□ 0.16
RNF43-208ENST00000584437 GGT6Q6P531 493 aa16.03■□□□□ 0.16
RNF43-208ENST00000584437 RSPH4AQ5TD94 716 aa16.03■□□□□ 0.16
RNF43-208ENST00000584437 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
RNF43-208ENST00000584437 MAP7D2Q96T17 732 aa16.03■□□□□ 0.16
RNF43-208ENST00000584437 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.16
RNF43-208ENST00000584437 EFCAB2Q5VUJ9 269 aa16.02■□□□□ 0.15
RNF43-208ENST00000584437 NUCB2P80303 420 aa16.01■□□□□ 0.15
RNF43-208ENST00000584437 PANK3Q9H999 370 aa16.01■□□□□ 0.15
RNF43-208ENST00000584437 DDX19BQ9UMR2 479 aa16.01■□□□□ 0.15
RNF43-208ENST00000584437 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
RNF43-208ENST00000584437 AAMPQ13685 434 aa16.01■□□□□ 0.15
RNF43-208ENST00000584437 TAF7LQ5H9L4 462 aa16.01■□□□□ 0.15
RNF43-208ENST00000584437 COG6Q9Y2V7 657 aa16■□□□□ 0.15
RNF43-208ENST00000584437 CEP89Q96ST8 783 aa16■□□□□ 0.15
RNF43-208ENST00000584437 MRE11P49959 708 aa16■□□□□ 0.15
RNF43-208ENST00000584437 CREBRFQ8IUR6 639 aa16■□□□□ 0.15
RNF43-208ENST00000584437 CCAR2Q8N163 923 aaKnown RBP16■□□□□ 0.15
RNF43-208ENST00000584437 RILPL2Q969X0 211 aa16■□□□□ 0.15
RNF43-208ENST00000584437 TPD52L1Q16890 204 aaPredicted RBP15.99■□□□□ 0.15
RNF43-208ENST00000584437 CHMP3Q9Y3E7 222 aa15.99■□□□□ 0.15
RNF43-208ENST00000584437 NFKBIBQ15653 356 aa15.99■□□□□ 0.15
RNF43-208ENST00000584437 RUFY2Q8WXA3 655 aa15.98■□□□□ 0.15
RNF43-208ENST00000584437 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
RNF43-208ENST00000584437 ZNF592Q92610 1267 aa15.97■□□□□ 0.15
RNF43-208ENST00000584437 RRP7AQ9Y3A4 280 aaKnown RBP15.97■□□□□ 0.15
RNF43-208ENST00000584437 USP47Q96K76 1375 aa15.96■□□□□ 0.15
RNF43-208ENST00000584437 TPM2P07951 284 aa15.96■□□□□ 0.15
RNF43-208ENST00000584437 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
RNF43-208ENST00000584437 PAK3O75914 559 aaPredicted RBP15.96■□□□□ 0.14
RNF43-208ENST00000584437 ZKSCAN1P17029 563 aaPredicted RBP15.95■□□□□ 0.14
RNF43-208ENST00000584437 DIAPH3Q9NSV4 1193 aa15.95■□□□□ 0.14
RNF43-208ENST00000584437 ERCC6Q03468 1493 aa15.94■□□□□ 0.14
RNF43-208ENST00000584437 ARGLU1Q9NWB6 273 aaPredicted RBP15.94■□□□□ 0.14
RNF43-208ENST00000584437 CSB-PGBD3P0DP91 1061 aa15.94■□□□□ 0.14
RNF43-208ENST00000584437 CPLX2Q6PUV4 134 aaKnown RBP15.94■□□□□ 0.14
RNF43-208ENST00000584437 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
RNF43-208ENST00000584437 DZIP1LQ8IYY4 767 aaKnown RBP15.94■□□□□ 0.14
RNF43-208ENST00000584437 PES1O00541 588 aaKnown RBP15.94■□□□□ 0.14
RNF43-208ENST00000584437 IPO7O95373 1038 aaKnown RBP15.93■□□□□ 0.14
RNF43-208ENST00000584437 FOXD4L6Q3SYB3 417 aaPredicted RBP15.93■□□□□ 0.14
RNF43-208ENST00000584437 FOXD4L3Q6VB84 417 aaPredicted RBP15.93■□□□□ 0.14
RNF43-208ENST00000584437 CCDC39Q9UFE4 941 aa15.93■□□□□ 0.14
RNF43-208ENST00000584437 ZNF330Q9Y3S2 320 aaPredicted RBP15.93■□□□□ 0.14
RNF43-208ENST00000584437 API5Q9BZZ5 524 aaKnown RBP15.93■□□□□ 0.14
RNF43-208ENST00000584437 LRRFIP1Q32MZ4 808 aaKnown RBP15.92■□□□□ 0.14
RNF43-208ENST00000584437 ROCK1Q13464 1354 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 HOMER1Q86YM7 354 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 TOMM22Q9NS69 142 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 RAPGEF2Q9Y4G8 1499 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 APAF1O14727 1248 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 C22orf23Q9BZE7 217 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 MLECQ14165 292 aa15.92■□□□□ 0.14
RNF43-208ENST00000584437 INTS3Q68E01 1043 aaKnown RBP15.91■□□□□ 0.14
RNF43-208ENST00000584437 ANKRD20A12PQ8NF67 263 aa15.91■□□□□ 0.14
RNF43-208ENST00000584437 NOM1Q5C9Z4 860 aaKnown RBP15.91■□□□□ 0.14
RNF43-208ENST00000584437 ACBD3Q9H3P7 528 aa15.91■□□□□ 0.14
RNF43-208ENST00000584437 AMPHP49418 695 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms