RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 LOC105371045A0A1W2PR82 267 aa24.94■■□□□ 1.58
SKA2-209ENST00000583976 FAM135AQ9P2D6 1515 aa24.94■■□□□ 1.58
SKA2-209ENST00000583976 POLR1AO95602 1720 aaPredicted RBP24.94■■□□□ 1.58
SKA2-209ENST00000583976 KIF3BO15066 747 aa24.93■■□□□ 1.58
SKA2-209ENST00000583976 NEURL4Q96JN8 1562 aa24.93■■□□□ 1.58
SKA2-209ENST00000583976 RNF17Q9BXT8 1623 aaKnown RBP24.91■■□□□ 1.58
SKA2-209ENST00000583976 MAST1Q9Y2H9 1570 aa24.91■■□□□ 1.58
SKA2-209ENST00000583976 PPP6R1Q9UPN7 881 aa24.9■■□□□ 1.58
SKA2-209ENST00000583976 TNRQ92752 1358 aa24.9■■□□□ 1.58
SKA2-209ENST00000583976 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
SKA2-209ENST00000583976 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
SKA2-209ENST00000583976 MROH1Q8NDA8 1641 aa24.86■■□□□ 1.57
SKA2-209ENST00000583976 PKD2Q13563 968 aa24.86■■□□□ 1.57
SKA2-209ENST00000583976 KANK4Q5T7N3 995 aaPredicted RBP24.86■■□□□ 1.57
SKA2-209ENST00000583976 ABCC3O15438 1527 aa24.85■■□□□ 1.57
SKA2-209ENST00000583976 EIF2AK4Q9P2K8 1649 aaKnown RBP24.84■■□□□ 1.57
SKA2-209ENST00000583976 MAP3K1Q13233 1512 aa24.84■■□□□ 1.57
SKA2-209ENST00000583976 ZC3H13Q5T200 1668 aaKnown RBP24.84■■□□□ 1.57
SKA2-209ENST00000583976 MYOM3Q5VTT5 1437 aa24.83■■□□□ 1.57
SKA2-209ENST00000583976 DISP3Q9P2K9 1392 aa24.82■■□□□ 1.56
SKA2-209ENST00000583976 CEP152O94986 1710 aa24.82■■□□□ 1.56
SKA2-209ENST00000583976 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
SKA2-209ENST00000583976 WASHC2CQ9Y4E1 1318 aa24.81■■□□□ 1.56
SKA2-209ENST00000583976 RSPH4AQ5TD94 716 aa24.8■■□□□ 1.56
SKA2-209ENST00000583976 UGGT1Q9NYU2 1555 aa24.78■■□□□ 1.56
SKA2-209ENST00000583976 NLRP1Q9C000 1473 aa24.77■■□□□ 1.56
SKA2-209ENST00000583976 TSPY4P0CV99 314 aa24.77■■□□□ 1.56
SKA2-209ENST00000583976 TSPY10P0CW01 314 aa24.77■■□□□ 1.56
SKA2-209ENST00000583976 MIA2Q96PC5 1412 aa24.77■■□□□ 1.56
SKA2-209ENST00000583976 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.76■■□□□ 1.554e-8■■■■■ 44
SKA2-209ENST00000583976 ERVK-7P63135 1459 aa24.75■■□□□ 1.55
SKA2-209ENST00000583976 ILDR2Q71H61 639 aa24.74■■□□□ 1.55
SKA2-209ENST00000583976 VWDEQ8N2E2 1590 aa24.74■■□□□ 1.55
SKA2-209ENST00000583976 PTPN23Q9H3S7 1636 aa24.73■■□□□ 1.55
SKA2-209ENST00000583976 DEPDC5O75140 1603 aa24.72■■□□□ 1.55
SKA2-209ENST00000583976 UBAP1LF5GYI3 381 aa24.72■■□□□ 1.55
SKA2-209ENST00000583976 DUOX2Q9NRD8 1548 aa24.71■■□□□ 1.55
SKA2-209ENST00000583976 IQGAP1P46940 1657 aa24.71■■□□□ 1.55
SKA2-209ENST00000583976 PRDM15P57071 1507 aaPredicted RBP24.71■■□□□ 1.55
SKA2-209ENST00000583976 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.55
SKA2-209ENST00000583976 CPS1P31327 1500 aa24.7■■□□□ 1.54
SKA2-209ENST00000583976 ABCC5O15440 1437 aa24.68■■□□□ 1.54
SKA2-209ENST00000583976 NPHP4O75161 1426 aaPredicted RBP24.68■■□□□ 1.54
SKA2-209ENST00000583976 UBR1Q8IWV7 1749 aa24.67■■□□□ 1.54
SKA2-209ENST00000583976 KIF15Q9NS87 1388 aa24.67■■□□□ 1.54
SKA2-209ENST00000583976 MED14O60244 1454 aa24.66■■□□□ 1.54
SKA2-209ENST00000583976 STRCP1A6NGW2 1772 aa24.65■■□□□ 1.54
SKA2-209ENST00000583976 CFAP65Q6ZU64 1925 aaKnown RBP24.65■■□□□ 1.54
SKA2-209ENST00000583976 DAPK1P53355 1430 aa24.63■■□□□ 1.53
SKA2-209ENST00000583976 ALKQ9UM73 1620 aa24.63■■□□□ 1.53
SKA2-209ENST00000583976 ERBINQ96RT1 1412 aa24.62■■□□□ 1.53
SKA2-209ENST00000583976 ANKLE2Q86XL3 938 aa24.62■■□□□ 1.53
SKA2-209ENST00000583976 FGD6Q6ZV73 1430 aa24.61■■□□□ 1.53
SKA2-209ENST00000583976 THEMISQ8N1K5 641 aaPredicted RBP24.6■■□□□ 1.53
SKA2-209ENST00000583976 SYNMO15061 1565 aa24.57■■□□□ 1.52
SKA2-209ENST00000583976 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
SKA2-209ENST00000583976 PIK3C2BO00750 1634 aa24.57■■□□□ 1.52
SKA2-209ENST00000583976 RRP7BPQ9NSQ0 103 aa24.56■■□□□ 1.52
SKA2-209ENST00000583976 SCAF11Q99590 1463 aaKnown RBP24.55■■□□□ 1.52
SKA2-209ENST00000583976 PIP4K2BP78356 416 aa24.54■■□□□ 1.52
SKA2-209ENST00000583976 ARHGAP31Q2M1Z3 1444 aa24.53■■□□□ 1.52
SKA2-209ENST00000583976 ARHGAP23Q9P227 1491 aa24.52■■□□□ 1.52
SKA2-209ENST00000583976 SLIT1O75093 1534 aa24.52■■□□□ 1.52
SKA2-209ENST00000583976 MED1Q15648 1581 aaPredicted RBP24.52■■□□□ 1.52
SKA2-209ENST00000583976 LRRC7Q96NW7 1537 aa24.51■■□□□ 1.51
SKA2-209ENST00000583976 HSPA1LP34931 641 aa24.51■■□□□ 1.51
SKA2-209ENST00000583976 SOCS7O14512 581 aa24.49■■□□□ 1.51
SKA2-209ENST00000583976 APLP2Q06481 763 aa24.49■■□□□ 1.51
SKA2-209ENST00000583976 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.49■■□□□ 1.512e-10■□□□□ 10.6
SKA2-209ENST00000583976 LMTK2Q8IWU2 1503 aa24.48■■□□□ 1.51
SKA2-209ENST00000583976 EFCAB6Q5THR3 1501 aa24.47■■□□□ 1.51
SKA2-209ENST00000583976 CHIC2Q9UKJ5 165 aa24.47■■□□□ 1.51
SKA2-209ENST00000583976 TOM1O60784 492 aa24.45■■□□□ 1.5
SKA2-209ENST00000583976 ADGRL2O95490 1459 aa24.45■■□□□ 1.5
SKA2-209ENST00000583976 ANKRD30AQ9BXX3 1397 aa24.44■■□□□ 1.5
SKA2-209ENST00000583976 LTKP29376 864 aa24.44■■□□□ 1.5
SKA2-209ENST00000583976 XIRP1Q702N8 1843 aaKnown RBP24.44■■□□□ 1.5
SKA2-209ENST00000583976 KANK1Q14678 1352 aa24.42■■□□□ 1.5
SKA2-209ENST00000583976 KDM5AP29375 1690 aaKnown RBP24.41■■□□□ 1.5
SKA2-209ENST00000583976 ADGRB3O60242 1522 aa24.4■■□□□ 1.5
SKA2-209ENST00000583976 TMEM2Q9UHN6 1383 aa24.39■■□□□ 1.49
SKA2-209ENST00000583976 TXNDC2Q86VQ3 553 aa24.38■■□□□ 1.49
SKA2-209ENST00000583976 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
SKA2-209ENST00000583976 NOS1P29475 1434 aa24.37■■□□□ 1.49
SKA2-209ENST00000583976 FAM50AQ14320 339 aaKnown RBP24.33■■□□□ 1.49
SKA2-209ENST00000583976 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.48
SKA2-209ENST00000583976 TET3O43151 1660 aa24.32■■□□□ 1.48
SKA2-209ENST00000583976 GCC2Q8IWJ2 1684 aa24.31■■□□□ 1.48
SKA2-209ENST00000583976 UNC13BO14795 1591 aa24.31■■□□□ 1.48
SKA2-209ENST00000583976 IDI1Q13907 227 aa24.31■■□□□ 1.48
SKA2-209ENST00000583976 ANKRD50Q9ULJ7 1429 aa24.31■■□□□ 1.48
SKA2-209ENST00000583976 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
SKA2-209ENST00000583976 EID1Q9Y6B2 187 aa24.3■■□□□ 1.48
SKA2-209ENST00000583976 NWD1Q149M9 1564 aa24.28■■□□□ 1.48
SKA2-209ENST00000583976 RPRD2Q5VT52 1461 aaKnown RBP24.26■■□□□ 1.47
SKA2-209ENST00000583976 TMEM94Q12767 1356 aa24.23■■□□□ 1.47
SKA2-209ENST00000583976 E9PCH4 1651 aa24.23■■□□□ 1.47
SKA2-209ENST00000583976 TMEM131LA2VDJ0 1609 aa24.22■■□□□ 1.47
SKA2-209ENST00000583976 ZFYVE9O95405 1425 aa24.22■■□□□ 1.47
SKA2-209ENST00000583976 SLC26A8Q96RN1 970 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms