RNA–Protein interactions for RNA: ENST00000583648.5

KPNB1-214, Transcript of karyopherin subunit beta 1, humanhuman

TSL 4

Gene KPNB1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-214ENST00000583648 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
KPNB1-214ENST00000583648 KDM5DQ9BY66 1539 aa22.72■■□□□ 1.23
KPNB1-214ENST00000583648 PZPP20742 1482 aa22.71■■□□□ 1.23
KPNB1-214ENST00000583648 PLA2R1Q13018 1463 aa22.71■■□□□ 1.23
KPNB1-214ENST00000583648 FBXO31Q5XUX0 539 aaPredicted RBP22.7■■□□□ 1.22
KPNB1-214ENST00000583648 TNRQ92752 1358 aa22.7■■□□□ 1.22
KPNB1-214ENST00000583648 ABCC5O15440 1437 aa22.69■■□□□ 1.22
KPNB1-214ENST00000583648 CAMSAP1Q5T5Y3 1602 aa22.68■■□□□ 1.22
KPNB1-214ENST00000583648 SHANK2Q9UPX8 1470 aa22.68■■□□□ 1.22
KPNB1-214ENST00000583648 FGD6Q6ZV73 1430 aa22.68■■□□□ 1.22
KPNB1-214ENST00000583648 A2ML1A8K2U0 1454 aa22.67■■□□□ 1.22
KPNB1-214ENST00000583648 TCOF1Q13428 1488 aaKnown RBP22.66■■□□□ 1.22
KPNB1-214ENST00000583648 NCKAP5LQ9HCH0 1330 aa22.66■■□□□ 1.22
KPNB1-214ENST00000583648 CEP170BQ9Y4F5 1589 aaPredicted RBP22.66■■□□□ 1.22
KPNB1-214ENST00000583648 DUOX2Q9NRD8 1548 aa22.66■■□□□ 1.22
KPNB1-214ENST00000583648 MYO3AQ8NEV4 1616 aa22.64■■□□□ 1.22
KPNB1-214ENST00000583648 KIF15Q9NS87 1388 aa22.64■■□□□ 1.22
KPNB1-214ENST00000583648 ZNF142P52746 1687 aaPredicted RBP22.63■■□□□ 1.21
KPNB1-214ENST00000583648 PTPN23Q9H3S7 1636 aa22.63■■□□□ 1.21
KPNB1-214ENST00000583648 DAPK1P53355 1430 aa22.63■■□□□ 1.21
KPNB1-214ENST00000583648 EIF2AK4Q9P2K8 1649 aaKnown RBP22.62■■□□□ 1.21
KPNB1-214ENST00000583648 THEMISQ8N1K5 641 aaPredicted RBP22.62■■□□□ 1.21
KPNB1-214ENST00000583648 RRP7BPQ9NSQ0 103 aa22.62■■□□□ 1.21
KPNB1-214ENST00000583648 NLRP1Q9C000 1473 aa22.61■■□□□ 1.21
KPNB1-214ENST00000583648 RNF17Q9BXT8 1623 aaKnown RBP22.61■■□□□ 1.21
KPNB1-214ENST00000583648 ERBINQ96RT1 1412 aa22.61■■□□□ 1.21
KPNB1-214ENST00000583648 ANKRD30AQ9BXX3 1397 aa22.6■■□□□ 1.21
KPNB1-214ENST00000583648 ABCC3O15438 1527 aa22.59■■□□□ 1.21
KPNB1-214ENST00000583648 IQSEC2Q5JU85 1478 aa22.56■■□□□ 1.2
KPNB1-214ENST00000583648 ANKLE2Q86XL3 938 aa22.56■■□□□ 1.2
KPNB1-214ENST00000583648 DNMT1P26358 1616 aaKnown RBP22.56■■□□□ 1.2
KPNB1-214ENST00000583648 LTBP4Q8N2S1 1624 aa22.56■■□□□ 1.2
KPNB1-214ENST00000583648 ARHGAP31Q2M1Z3 1444 aa22.55■■□□□ 1.2
KPNB1-214ENST00000583648 CHIC2Q9UKJ5 165 aa22.54■■□□□ 1.2
KPNB1-214ENST00000583648 KANK1Q14678 1352 aa22.53■■□□□ 1.2
KPNB1-214ENST00000583648 ZC3H13Q5T200 1668 aaKnown RBP22.53■■□□□ 1.2
KPNB1-214ENST00000583648 MROH1Q8NDA8 1641 aa22.52■■□□□ 1.2
KPNB1-214ENST00000583648 ZNF335Q9H4Z2 1342 aaPredicted RBP22.52■■□□□ 1.2
KPNB1-214ENST00000583648 SPATA31D1Q6ZQQ2 1576 aa22.51■■□□□ 1.19
KPNB1-214ENST00000583648 FAM50AQ14320 339 aaKnown RBP22.51■■□□□ 1.19
KPNB1-214ENST00000583648 ERVK-7P63135 1459 aa22.51■■□□□ 1.19
KPNB1-214ENST00000583648 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.5■■□□□ 1.191e-6■■■■■ 31.3
KPNB1-214ENST00000583648 UGGT1Q9NYU2 1555 aa22.5■■□□□ 1.19
KPNB1-214ENST00000583648 ADGRL2O95490 1459 aa22.49■■□□□ 1.19
KPNB1-214ENST00000583648 PRDM15P57071 1507 aaPredicted RBP22.49■■□□□ 1.19
KPNB1-214ENST00000583648 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.49■■□□□ 1.193e-7■□□□□ 9.4
KPNB1-214ENST00000583648 CROCC2H7BZ55 1655 aa22.49■■□□□ 1.19
KPNB1-214ENST00000583648 MED14O60244 1454 aa22.45■■□□□ 1.18
KPNB1-214ENST00000583648 LMTK2Q8IWU2 1503 aa22.43■■□□□ 1.18
KPNB1-214ENST00000583648 NPHP4O75161 1426 aaPredicted RBP22.41■■□□□ 1.18
KPNB1-214ENST00000583648 DEPDC5O75140 1603 aa22.41■■□□□ 1.18
KPNB1-214ENST00000583648 ANKRD50Q9ULJ7 1429 aa22.4■■□□□ 1.18
KPNB1-214ENST00000583648 NEURL4Q96JN8 1562 aa22.39■■□□□ 1.18
KPNB1-214ENST00000583648 VWDEQ8N2E2 1590 aa22.38■■□□□ 1.17
KPNB1-214ENST00000583648 ROCK1Q13464 1354 aa22.37■■□□□ 1.17
KPNB1-214ENST00000583648 UBAP1LF5GYI3 381 aa22.36■■□□□ 1.17
KPNB1-214ENST00000583648 CPS1P31327 1500 aa22.36■■□□□ 1.17
KPNB1-214ENST00000583648 CEP152O94986 1710 aa22.35■■□□□ 1.17
KPNB1-214ENST00000583648 SLC52A1Q9NWF4 448 aa22.35■■□□□ 1.17
KPNB1-214ENST00000583648 EID1Q9Y6B2 187 aa22.35■■□□□ 1.17
KPNB1-214ENST00000583648 IDI1Q13907 227 aa22.34■■□□□ 1.17
KPNB1-214ENST00000583648 TXNDC2Q86VQ3 553 aa22.34■■□□□ 1.17
KPNB1-214ENST00000583648 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
KPNB1-214ENST00000583648 ARHGAP23Q9P227 1491 aa22.33■■□□□ 1.16
KPNB1-214ENST00000583648 NOS1P29475 1434 aa22.32■■□□□ 1.16
KPNB1-214ENST00000583648 POLR1AO95602 1720 aaPredicted RBP22.32■■□□□ 1.16
KPNB1-214ENST00000583648 SLIT1O75093 1534 aa22.31■■□□□ 1.16
KPNB1-214ENST00000583648 SCAF11Q99590 1463 aaKnown RBP22.31■■□□□ 1.16
KPNB1-214ENST00000583648 LTKP29376 864 aa22.31■■□□□ 1.16
KPNB1-214ENST00000583648 RPRD2Q5VT52 1461 aaKnown RBP22.3■■□□□ 1.16
KPNB1-214ENST00000583648 TMEM2Q9UHN6 1383 aa22.3■■□□□ 1.16
KPNB1-214ENST00000583648 TOM1O60784 492 aa22.29■■□□□ 1.16
KPNB1-214ENST00000583648 EFCAB6Q5THR3 1501 aa22.27■■□□□ 1.16
KPNB1-214ENST00000583648 UBR1Q8IWV7 1749 aa22.26■■□□□ 1.15
KPNB1-214ENST00000583648 IQGAP1P46940 1657 aa22.24■■□□□ 1.15
KPNB1-214ENST00000583648 PPARGC1BQ86YN6 1023 aaKnown RBP22.23■■□□□ 1.15
KPNB1-214ENST00000583648 ITGAEP38570 1179 aa22.21■■□□□ 1.15
KPNB1-214ENST00000583648 HDGFP51858 240 aaKnown RBP22.21■■□□□ 1.15
KPNB1-214ENST00000583648 KDM5AP29375 1690 aaKnown RBP22.2■■□□□ 1.15
KPNB1-214ENST00000583648 SYNMO15061 1565 aa22.2■■□□□ 1.14
KPNB1-214ENST00000583648 PIK3C2BO00750 1634 aa22.2■■□□□ 1.14
KPNB1-214ENST00000583648 CFAP65Q6ZU64 1925 aaKnown RBP22.19■■□□□ 1.14
KPNB1-214ENST00000583648 NUP155O75694 1391 aa22.18■■□□□ 1.14
KPNB1-214ENST00000583648 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
KPNB1-214ENST00000583648 UNC13BO14795 1591 aa22.16■■□□□ 1.14
KPNB1-214ENST00000583648 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
KPNB1-214ENST00000583648 TET3O43151 1660 aa22.15■■□□□ 1.14
KPNB1-214ENST00000583648 ADGRB3O60242 1522 aa22.15■■□□□ 1.14
KPNB1-214ENST00000583648 KCNA6P17658 529 aa22.14■■□□□ 1.13
KPNB1-214ENST00000583648 PIP4K2BP78356 416 aa22.14■■□□□ 1.13
KPNB1-214ENST00000583648 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.13■■□□□ 1.13
KPNB1-214ENST00000583648 DISP3Q9P2K9 1392 aa22.12■■□□□ 1.13
KPNB1-214ENST00000583648 SCAF1Q9H7N4 1312 aaKnown RBP22.12■■□□□ 1.13
KPNB1-214ENST00000583648 ZFYVE9O95405 1425 aa22.09■■□□□ 1.13
KPNB1-214ENST00000583648 HSPA1LP34931 641 aa22.09■■□□□ 1.13
KPNB1-214ENST00000583648 SLC26A8Q96RN1 970 aa22.09■■□□□ 1.13
KPNB1-214ENST00000583648 PLEKHG1Q9ULL1 1385 aa22.09■■□□□ 1.13
KPNB1-214ENST00000583648 IQGAP3Q86VI3 1631 aa22.08■■□□□ 1.13
KPNB1-214ENST00000583648 RIMS2Q9UQ26 1411 aa22.07■■□□□ 1.12
KPNB1-214ENST00000583648 PPP1R15AO75807 674 aaPredicted RBP22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms