RNA–Protein interactions for RNA: ENST00000583593.2

CCDC57-218, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-218ENST00000583593 RSPH4AQ5TD94 716 aa21.58■■□□□ 1.05
CCDC57-218ENST00000583593 FBXO31Q5XUX0 539 aaPredicted RBP21.58■■□□□ 1.05
CCDC57-218ENST00000583593 ARHGEF5Q12774 1597 aa21.57■■□□□ 1.04
CCDC57-218ENST00000583593 KDM5DQ9BY66 1539 aa21.56■■□□□ 1.04
CCDC57-218ENST00000583593 PZPP20742 1482 aa21.56■■□□□ 1.04
CCDC57-218ENST00000583593 FAM135AQ9P2D6 1515 aa21.55■■□□□ 1.04
CCDC57-218ENST00000583593 SPATA31D1Q6ZQQ2 1576 aa21.54■■□□□ 1.04
CCDC57-218ENST00000583593 TNRQ92752 1358 aa21.54■■□□□ 1.04
CCDC57-218ENST00000583593 NEURL4Q96JN8 1562 aa21.53■■□□□ 1.04
CCDC57-218ENST00000583593 POLR1AO95602 1720 aaPredicted RBP21.52■■□□□ 1.04
CCDC57-218ENST00000583593 WASHC2CQ9Y4E1 1318 aa21.52■■□□□ 1.03
CCDC57-218ENST00000583593 LRRC9Q6ZRR7 1453 aa21.52■■□□□ 1.03
CCDC57-218ENST00000583593 UBAP1LF5GYI3 381 aa21.51■■□□□ 1.03
CCDC57-218ENST00000583593 VPS8Q8N3P4 1428 aa21.49■■□□□ 1.03
CCDC57-218ENST00000583593 TSPY4P0CV99 314 aa21.49■■□□□ 1.03
CCDC57-218ENST00000583593 TSPY10P0CW01 314 aa21.49■■□□□ 1.03
CCDC57-218ENST00000583593 LOC105371045A0A1W2PR82 267 aa21.48■■□□□ 1.03
CCDC57-218ENST00000583593 MAST1Q9Y2H9 1570 aa21.48■■□□□ 1.03
CCDC57-218ENST00000583593 MIA2Q96PC5 1412 aa21.47■■□□□ 1.03
CCDC57-218ENST00000583593 KANK4Q5T7N3 995 aaPredicted RBP21.46■■□□□ 1.03
CCDC57-218ENST00000583593 RNF17Q9BXT8 1623 aaKnown RBP21.46■■□□□ 1.03
CCDC57-218ENST00000583593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
CCDC57-218ENST00000583593 SOCS7O14512 581 aa21.45■■□□□ 1.02
CCDC57-218ENST00000583593 NLRP1Q9C000 1473 aa21.45■■□□□ 1.02
CCDC57-218ENST00000583593 UGGT1Q9NYU2 1555 aa21.43■■□□□ 1.02
CCDC57-218ENST00000583593 ABCC3O15438 1527 aa21.42■■□□□ 1.02
CCDC57-218ENST00000583593 MAP3K1Q13233 1512 aa21.42■■□□□ 1.02
CCDC57-218ENST00000583593 ANKLE2Q86XL3 938 aa21.42■■□□□ 1.02
CCDC57-218ENST00000583593 THEMISQ8N1K5 641 aaPredicted RBP21.42■■□□□ 1.02
CCDC57-218ENST00000583593 SHANK2Q9UPX8 1470 aa21.42■■□□□ 1.02
CCDC57-218ENST00000583593 MROH1Q8NDA8 1641 aa21.41■■□□□ 1.02
CCDC57-218ENST00000583593 VWDEQ8N2E2 1590 aa21.41■■□□□ 1.02
CCDC57-218ENST00000583593 CPS1P31327 1500 aa21.41■■□□□ 1.02
CCDC57-218ENST00000583593 ZC3H13Q5T200 1668 aaKnown RBP21.4■■□□□ 1.02
CCDC57-218ENST00000583593 DEPDC5O75140 1603 aa21.4■■□□□ 1.02
CCDC57-218ENST00000583593 EIF2AK4Q9P2K8 1649 aaKnown RBP21.4■■□□□ 1.02
CCDC57-218ENST00000583593 MED14O60244 1454 aa21.4■■□□□ 1.02
CCDC57-218ENST00000583593 MYOM3Q5VTT5 1437 aa21.38■■□□□ 1.01
CCDC57-218ENST00000583593 NPHP4O75161 1426 aaPredicted RBP21.38■■□□□ 1.01
CCDC57-218ENST00000583593 CEP152O94986 1710 aa21.36■■□□□ 1.01
CCDC57-218ENST00000583593 ERVK-7P63135 1459 aa21.36■■□□□ 1.01
CCDC57-218ENST00000583593 IQGAP1P46940 1657 aa21.34■■□□□ 1.01
CCDC57-218ENST00000583593 CFAP65Q6ZU64 1925 aaKnown RBP21.33■■□□□ 1.01
CCDC57-218ENST00000583593 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1
CCDC57-218ENST00000583593 STRCP1A6NGW2 1772 aa21.33■■□□□ 1
CCDC57-218ENST00000583593 ALKQ9UM73 1620 aa21.33■■□□□ 1
CCDC57-218ENST00000583593 TOM1O60784 492 aa21.32■■□□□ 1
CCDC57-218ENST00000583593 HSPA1LP34931 641 aa21.32■■□□□ 1
CCDC57-218ENST00000583593 PIP4K2BP78356 416 aa21.31■■□□□ 1
CCDC57-218ENST00000583593 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
CCDC57-218ENST00000583593 SCAF1Q9H7N4 1312 aaKnown RBP21.29■■□□□ 1
CCDC57-218ENST00000583593 CROCC2H7BZ55 1655 aa21.29■■□□□ 1
CCDC57-218ENST00000583593 ABCC5O15440 1437 aa21.29■■□□□ 1
CCDC57-218ENST00000583593 PRDM15P57071 1507 aaPredicted RBP21.27■■□□□ 1
CCDC57-218ENST00000583593 PTPN23Q9H3S7 1636 aa21.26■□□□□ 0.99
CCDC57-218ENST00000583593 KIF15Q9NS87 1388 aa21.25■□□□□ 0.99
CCDC57-218ENST00000583593 ARHGAP31Q2M1Z3 1444 aa21.25■□□□□ 0.99
CCDC57-218ENST00000583593 LRRC7Q96NW7 1537 aa21.24■□□□□ 0.99
CCDC57-218ENST00000583593 MED1Q15648 1581 aaPredicted RBP21.24■□□□□ 0.99
CCDC57-218ENST00000583593 ERBINQ96RT1 1412 aa21.24■□□□□ 0.99
CCDC57-218ENST00000583593 RRP7BPQ9NSQ0 103 aa21.24■□□□□ 0.99
CCDC57-218ENST00000583593 ARHGAP23Q9P227 1491 aa21.23■□□□□ 0.99
CCDC57-218ENST00000583593 LTKP29376 864 aa21.22■□□□□ 0.99
CCDC57-218ENST00000583593 SLIT1O75093 1534 aa21.22■□□□□ 0.99
CCDC57-218ENST00000583593 DAPK1P53355 1430 aa21.21■□□□□ 0.99
CCDC57-218ENST00000583593 SCAF11Q99590 1463 aaKnown RBP21.21■□□□□ 0.99
CCDC57-218ENST00000583593 SYNMO15061 1565 aa21.2■□□□□ 0.98
CCDC57-218ENST00000583593 PIK3C2BO00750 1634 aa21.18■□□□□ 0.98
CCDC57-218ENST00000583593 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.18■□□□□ 0.98
CCDC57-218ENST00000583593 FGD6Q6ZV73 1430 aa21.18■□□□□ 0.98
CCDC57-218ENST00000583593 TXNDC2Q86VQ3 553 aa21.17■□□□□ 0.98
CCDC57-218ENST00000583593 XIRP1Q702N8 1843 aaKnown RBP21.15■□□□□ 0.98
CCDC57-218ENST00000583593 APLP2Q06481 763 aa21.14■□□□□ 0.97
CCDC57-218ENST00000583593 LMTK2Q8IWU2 1503 aa21.14■□□□□ 0.97
CCDC57-218ENST00000583593 CHIC2Q9UKJ5 165 aa21.13■□□□□ 0.97
CCDC57-218ENST00000583593 TMEM2Q9UHN6 1383 aa21.12■□□□□ 0.97
CCDC57-218ENST00000583593 KDM5AP29375 1690 aaKnown RBP21.11■□□□□ 0.97
CCDC57-218ENST00000583593 KANK1Q14678 1352 aa21.1■□□□□ 0.97
CCDC57-218ENST00000583593 ANKRD30AQ9BXX3 1397 aa21.1■□□□□ 0.97
CCDC57-218ENST00000583593 IDI1Q13907 227 aa21.1■□□□□ 0.97
CCDC57-218ENST00000583593 EID1Q9Y6B2 187 aa21.1■□□□□ 0.97
CCDC57-218ENST00000583593 SENP3Q9H4L4 574 aaPredicted RBP21.09■□□□□ 0.97
CCDC57-218ENST00000583593 EFCAB6Q5THR3 1501 aa21.08■□□□□ 0.96
CCDC57-218ENST00000583593 NOS1P29475 1434 aa21.07■□□□□ 0.96
CCDC57-218ENST00000583593 TET3O43151 1660 aa21.06■□□□□ 0.96
CCDC57-218ENST00000583593 STAG3Q9UJ98 1225 aa21.06■□□□□ 0.96
CCDC57-218ENST00000583593 ADGRL2O95490 1459 aa21.06■□□□□ 0.96
CCDC57-218ENST00000583593 ADGRB3O60242 1522 aa21.02■□□□□ 0.96
CCDC57-218ENST00000583593 PHF23Q9BUL5 403 aaPredicted RBP21.01■□□□□ 0.95
CCDC57-218ENST00000583593 KCNA6P17658 529 aa21■□□□□ 0.95
CCDC57-218ENST00000583593 SLC26A8Q96RN1 970 aa21■□□□□ 0.95
CCDC57-218ENST00000583593 TMEM94Q12767 1356 aa20.99■□□□□ 0.95
CCDC57-218ENST00000583593 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
CCDC57-218ENST00000583593 SLC52A1Q9NWF4 448 aa20.98■□□□□ 0.95
CCDC57-218ENST00000583593 ANKRD50Q9ULJ7 1429 aa20.97■□□□□ 0.95
CCDC57-218ENST00000583593 FAM50AQ14320 339 aaKnown RBP20.97■□□□□ 0.95
CCDC57-218ENST00000583593 RBM33Q96EV2 1170 aaKnown RBP20.96■□□□□ 0.95
CCDC57-218ENST00000583593 RGS17Q9UGC6 210 aaPredicted RBP20.96■□□□□ 0.95
CCDC57-218ENST00000583593 MYO5BQ9ULV0 1848 aa20.96■□□□□ 0.95
CCDC57-218ENST00000583593 NWD1Q149M9 1564 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms